RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 TSGA10IPQ3SY00 556 aa11.3□□□□□ -0.6
PHC1-208ENST00000540574 OXER1Q8TDS5 423 aa11.3□□□□□ -0.6
PHC1-208ENST00000540574 NOC3LQ8WTT2 800 aaKnown RBP11.3□□□□□ -0.6
PHC1-208ENST00000540574 CCDC12Q8WUD4 166 aaPredicted RBP11.3□□□□□ -0.6
PHC1-208ENST00000540574 VPS16Q9H269 839 aa11.3□□□□□ -0.6
PHC1-208ENST00000540574 MROH5Q6ZUA9 1318 aa11.29□□□□□ -0.6
PHC1-208ENST00000540574 IDEP14735 1019 aa11.29□□□□□ -0.6
PHC1-208ENST00000540574 PDE4BQ07343 736 aa11.29□□□□□ -0.6
PHC1-208ENST00000540574 UBE3CQ15386 1083 aa11.29□□□□□ -0.6
PHC1-208ENST00000540574 SOGA3Q5TF21 947 aa11.29□□□□□ -0.6
PHC1-208ENST00000540574 GPKOWQ92917 476 aaPredicted RBP eCLIP11.29□□□□□ -0.6
PHC1-208ENST00000540574 CDK5RAP3Q96JB5 506 aa11.29□□□□□ -0.6
PHC1-208ENST00000540574 FAM170AA1A519 330 aa11.29□□□□□ -0.6
PHC1-208ENST00000540574 UBA7P41226 1012 aa11.29□□□□□ -0.6
PHC1-208ENST00000540574 KIF4BQ2VIQ3 1234 aa11.29□□□□□ -0.6
PHC1-208ENST00000540574 TANGO6Q9C0B7 1094 aa11.29□□□□□ -0.6
PHC1-208ENST00000540574 SLIT1O75093 1534 aa11.29□□□□□ -0.6
PHC1-208ENST00000540574 FAM205CA6NFA0 338 aa11.29□□□□□ -0.6
PHC1-208ENST00000540574 NEMFO60524 1076 aa11.29□□□□□ -0.6
PHC1-208ENST00000540574 DEXIO95424 95 aa11.29□□□□□ -0.6
PHC1-208ENST00000540574 EIF5P55010 431 aaKnown RBP11.29□□□□□ -0.6
PHC1-208ENST00000540574 SLC39A14Q15043 492 aa11.29□□□□□ -0.6
PHC1-208ENST00000540574 MAPKAPK5Q8IW41 473 aa11.29□□□□□ -0.6
PHC1-208ENST00000540574 TRIM34Q9BYJ4 488 aa11.29□□□□□ -0.6
PHC1-208ENST00000540574 CPVLQ9H3G5 476 aa11.29□□□□□ -0.6
PHC1-208ENST00000540574 ARGLU1Q9NWB6 273 aaPredicted RBP11.29□□□□□ -0.6
PHC1-208ENST00000540574 HIBADHP31937 336 aaKnown RBP11.28□□□□□ -0.6
PHC1-208ENST00000540574 KRT2P35908 639 aa11.28□□□□□ -0.6
PHC1-208ENST00000540574 FUCA2Q9BTY2 467 aa11.28□□□□□ -0.6
PHC1-208ENST00000540574 PAXBP1Q9Y5B6 917 aa11.28□□□□□ -0.6
PHC1-208ENST00000540574 CMA1P23946 247 aa11.28□□□□□ -0.6
PHC1-208ENST00000540574 IL6STP40189 918 aaPredicted RBP11.28□□□□□ -0.6
PHC1-208ENST00000540574 POSTNQ15063 836 aa11.28□□□□□ -0.6
PHC1-208ENST00000540574 FMR1NBQ8N0W7 255 aaPredicted RBP11.28□□□□□ -0.6
PHC1-208ENST00000540574 TMTC2Q8N394 836 aa11.28□□□□□ -0.6
PHC1-208ENST00000540574 RPGRQ92834 1020 aaKnown RBP11.28□□□□□ -0.6
PHC1-208ENST00000540574 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.28□□□□□ -0.6
PHC1-208ENST00000540574 MAGEC2Q9UBF1 373 aaPredicted RBP11.28□□□□□ -0.6
PHC1-208ENST00000540574 ERCC6LQ2NKX8 1250 aa11.28□□□□□ -0.6
PHC1-208ENST00000540574 ATL3Q6DD88 541 aa11.28□□□□□ -0.6
PHC1-208ENST00000540574 CCDC150Q8NCX0 1101 aa11.28□□□□□ -0.6
PHC1-208ENST00000540574 KCNB2Q92953 911 aa11.28□□□□□ -0.6
PHC1-208ENST00000540574 EPSTI1Q96J88 318 aa11.28□□□□□ -0.6
PHC1-208ENST00000540574 PLEKHA8P1O95397 391 aa11.27□□□□□ -0.6
PHC1-208ENST00000540574 CYP2D6P10635 497 aa11.27□□□□□ -0.6
PHC1-208ENST00000540574 CASQ1P31415 396 aa11.27□□□□□ -0.6
PHC1-208ENST00000540574 GRIN1Q05586 938 aa11.27□□□□□ -0.6
PHC1-208ENST00000540574 CELF1Q92879 486 aaKnown RBP11.27□□□□□ -0.6
PHC1-208ENST00000540574 CCDC47Q96A33 483 aaKnown RBP11.27□□□□□ -0.6
PHC1-208ENST00000540574 PUF60Q9UHX1 559 aaKnown RBP11.27□□□□□ -0.6
PHC1-208ENST00000540574 LMTK3Q96Q04 1460 aa11.27□□□□□ -0.61
PHC1-208ENST00000540574 TMEM232C9JQI7 657 aa11.27□□□□□ -0.61
PHC1-208ENST00000540574 GNAT2P19087 354 aa11.27□□□□□ -0.61
PHC1-208ENST00000540574 RPS8P62241 208 aaKnown RBP11.27□□□□□ -0.61
PHC1-208ENST00000540574 TFAP4Q01664 338 aa11.27□□□□□ -0.61
PHC1-208ENST00000540574 RILPL1Q5EBL4 403 aa11.27□□□□□ -0.61
PHC1-208ENST00000540574 TPTE2Q6XPS3 522 aa11.27□□□□□ -0.61
PHC1-208ENST00000540574 USP49Q70CQ1 688 aa11.27□□□□□ -0.61
PHC1-208ENST00000540574 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.27□□□□□ -0.61
PHC1-208ENST00000540574 AK7Q96M32 723 aa11.27□□□□□ -0.61
PHC1-208ENST00000540574 CSRNP2Q9H175 543 aa11.27□□□□□ -0.61
PHC1-208ENST00000540574 SLU7O95391 586 aaKnown RBP11.27□□□□□ -0.61
PHC1-208ENST00000540574 PRDX5P30044 214 aa11.27□□□□□ -0.61
PHC1-208ENST00000540574 CCDC178Q5BJE1 867 aa11.27□□□□□ -0.61
PHC1-208ENST00000540574 CAGE1Q8TC20 777 aa11.27□□□□□ -0.61
PHC1-208ENST00000540574 TGFBRAP1Q8WUH2 860 aa11.27□□□□□ -0.61
PHC1-208ENST00000540574 ZFP91Q96JP5 570 aaPredicted RBP11.27□□□□□ -0.61
PHC1-208ENST00000540574 POLR3EQ9NVU0 708 aa11.27□□□□□ -0.61
PHC1-208ENST00000540574 HPS5Q9UPZ3 1129 aa11.27□□□□□ -0.61
PHC1-208ENST00000540574 SOS2Q07890 1332 aaPredicted RBP11.27□□□□□ -0.61
PHC1-208ENST00000540574 CUTAO60888 179 aa11.26□□□□□ -0.61
PHC1-208ENST00000540574 DIXDC1Q155Q3 683 aa11.26□□□□□ -0.61
PHC1-208ENST00000540574 CCDC94Q9BW85 323 aaPredicted RBP11.26□□□□□ -0.61
PHC1-208ENST00000540574 A0A0U1RQG5 324 aaPredicted RBP11.26□□□□□ -0.61
PHC1-208ENST00000540574 GSG1L2A8MUP6 293 aa11.26□□□□□ -0.61
PHC1-208ENST00000540574 UBAP1LF5GYI3 381 aa11.26□□□□□ -0.61
PHC1-208ENST00000540574 ZSCAN12O43309 604 aa11.26□□□□□ -0.61
PHC1-208ENST00000540574 STAT6P42226 847 aa11.26□□□□□ -0.61
PHC1-208ENST00000540574 MAPK8IP2Q13387 824 aaPredicted RBP11.26□□□□□ -0.61
PHC1-208ENST00000540574 IQCB1Q15051 598 aa11.26□□□□□ -0.61
PHC1-208ENST00000540574 PARP10Q53GL7 1025 aa11.26□□□□□ -0.61
PHC1-208ENST00000540574 KRBA2Q6ZNG9 492 aa11.26□□□□□ -0.61
PHC1-208ENST00000540574 DYNLL2Q96FJ2 89 aa11.26□□□□□ -0.61
PHC1-208ENST00000540574 CARD6Q9BX69 1037 aa11.26□□□□□ -0.61
PHC1-208ENST00000540574 SAMSN1Q9NSI8 373 aaKnown RBP11.26□□□□□ -0.61
PHC1-208ENST00000540574 CTNND2Q9UQB3 1225 aa11.26□□□□□ -0.61
PHC1-208ENST00000540574 RTCBQ9Y3I0 505 aaKnown RBP11.26□□□□□ -0.61
PHC1-208ENST00000540574 UBN2Q6ZU65 1347 aa11.26□□□□□ -0.61
PHC1-208ENST00000540574 LETM2Q2VYF4 491 aa11.26□□□□□ -0.61
PHC1-208ENST00000540574 LRP10Q7Z4F1 713 aa11.26□□□□□ -0.61
PHC1-208ENST00000540574 LY9Q9HBG7 655 aa11.26□□□□□ -0.61
PHC1-208ENST00000540574 EPB41L4AQ9HCS5 686 aaPredicted RBP11.26□□□□□ -0.61
PHC1-208ENST00000540574 CCNL1Q9UK58 526 aaPredicted RBP11.26□□□□□ -0.61
PHC1-208ENST00000540574 LDHBP07195 334 aaKnown RBP11.25□□□□□ -0.61
PHC1-208ENST00000540574 USP17L8P0C7I0 530 aa11.25□□□□□ -0.61
PHC1-208ENST00000540574 CCDC96Q2M329 555 aa11.25□□□□□ -0.61
PHC1-208ENST00000540574 DPF2Q92785 391 aa11.25□□□□□ -0.61
PHC1-208ENST00000540574 MRFAP1L1Q96HT8 127 aa11.25□□□□□ -0.61
PHC1-208ENST00000540574 DRC1Q96MC2 740 aa11.25□□□□□ -0.61
PHC1-208ENST00000540574 SLC4A9Q96Q91 983 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms