RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 DYNLL2Q96FJ2 89 aa27.94■■■□□ 2.06
TMEM260-202ENST00000538838 GLIS2Q9BZE0 524 aaPredicted RBP27.94■■■□□ 2.06
TMEM260-202ENST00000538838 ANAPC4Q9UJX5 808 aa27.94■■■□□ 2.06
TMEM260-202ENST00000538838 USP48Q86UV5 1035 aa27.93■■■□□ 2.06
TMEM260-202ENST00000538838 SSC5DA1L4H1 1573 aa27.93■■■□□ 2.06
TMEM260-202ENST00000538838 RNF20Q5VTR2 975 aa27.92■■■□□ 2.06
TMEM260-202ENST00000538838 RASEFQ8IZ41 740 aa27.92■■■□□ 2.06
TMEM260-202ENST00000538838 C22orf23Q9BZE7 217 aa27.92■■■□□ 2.06
TMEM260-202ENST00000538838 PI4KBQ9UBF8 816 aa27.92■■■□□ 2.06
TMEM260-202ENST00000538838 TACC3Q9Y6A5 838 aa27.92■■■□□ 2.06
TMEM260-202ENST00000538838 FAM196BA6NMK8 535 aa27.92■■■□□ 2.06
TMEM260-202ENST00000538838 KIF3CO14782 793 aa27.92■■■□□ 2.06
TMEM260-202ENST00000538838 NBPF12Q5TAG4 269 aaPredicted RBP27.92■■■□□ 2.06
TMEM260-202ENST00000538838 CDC37L1Q7L3B6 337 aa27.91■■■□□ 2.06
TMEM260-202ENST00000538838 SLC44A5Q8NCS7 719 aa27.91■■■□□ 2.06
TMEM260-202ENST00000538838 EHD4Q9H223 541 aa27.91■■■□□ 2.06
TMEM260-202ENST00000538838 INCENPQ9NQS7 918 aa27.91■■■□□ 2.06
TMEM260-202ENST00000538838 SERPINB13Q9UIV8 391 aa27.91■■■□□ 2.06
TMEM260-202ENST00000538838 SNX14Q9Y5W7 946 aa27.91■■■□□ 2.06
TMEM260-202ENST00000538838 STOX1Q6ZVD7 989 aa27.9■■■□□ 2.06
TMEM260-202ENST00000538838 KCNB2Q92953 911 aa27.9■■■□□ 2.06
TMEM260-202ENST00000538838 DNAJC18Q9H819 358 aa27.9■■■□□ 2.06
TMEM260-202ENST00000538838 ZKSCAN1P17029 563 aaPredicted RBP27.89■■■□□ 2.06
TMEM260-202ENST00000538838 GABPAQ06546 454 aa27.89■■■□□ 2.06
TMEM260-202ENST00000538838 CRACR2BQ8N4Y2 399 aaPredicted RBP27.89■■■□□ 2.06
TMEM260-202ENST00000538838 ZNF784Q8NCA9 323 aaPredicted RBP27.89■■■□□ 2.06
TMEM260-202ENST00000538838 SLC3A2P08195 630 aaKnown RBP27.89■■■□□ 2.05
TMEM260-202ENST00000538838 AKNAD1Q5T1N1 836 aa27.89■■■□□ 2.05
TMEM260-202ENST00000538838 C16orf86Q6ZW13 317 aa27.89■■■□□ 2.05
TMEM260-202ENST00000538838 STAG1Q8WVM7 1258 aa27.89■■■□□ 2.05
TMEM260-202ENST00000538838 CDCA5Q96FF9 252 aa27.89■■■□□ 2.05
TMEM260-202ENST00000538838 NEDD4P46934 1319 aa27.88■■■□□ 2.05
TMEM260-202ENST00000538838 CHADLQ6NUI6 762 aa27.88■■■□□ 2.05
TMEM260-202ENST00000538838 TBC1D32Q96NH3 1257 aa27.88■■■□□ 2.05
TMEM260-202ENST00000538838 E7EWF7 191 aa27.87■■■□□ 2.05
TMEM260-202ENST00000538838 TRAF5O00463 557 aa27.87■■■□□ 2.05
TMEM260-202ENST00000538838 PRDM1O75626 825 aa27.87■■■□□ 2.05
TMEM260-202ENST00000538838 RBM25P49756 843 aaKnown RBP27.87■■■□□ 2.05
TMEM260-202ENST00000538838 MIGA2Q7L4E1 593 aa27.87■■■□□ 2.05
TMEM260-202ENST00000538838 TRIM34Q9BYJ4 488 aa27.87■■■□□ 2.05
TMEM260-202ENST00000538838 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.87■■■□□ 2.05
TMEM260-202ENST00000538838 ATAD5Q96QE3 1844 aa27.87■■■□□ 2.05
TMEM260-202ENST00000538838 CDK8P49336 464 aa27.86■■■□□ 2.05
TMEM260-202ENST00000538838 MFSD6Q6ZSS7 791 aa27.86■■■□□ 2.05
TMEM260-202ENST00000538838 METTL16Q86W50 562 aaKnown RBP27.86■■■□□ 2.05
TMEM260-202ENST00000538838 FOXP4Q8IVH2 680 aaPredicted RBP27.86■■■□□ 2.05
TMEM260-202ENST00000538838 HERC5Q9UII4 1024 aaKnown RBP27.86■■■□□ 2.05
TMEM260-202ENST00000538838 OTOFQ9HC10 1997 aa27.86■■■□□ 2.05
TMEM260-202ENST00000538838 PDE4BQ07343 736 aa27.85■■■□□ 2.05
TMEM260-202ENST00000538838 ADCK5Q3MIX3 580 aa27.85■■■□□ 2.05
TMEM260-202ENST00000538838 TSGA10IPQ3SY00 556 aa27.85■■■□□ 2.05
TMEM260-202ENST00000538838 RNF41Q9H4P4 317 aaPredicted RBP27.85■■■□□ 2.05
TMEM260-202ENST00000538838 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.85■■■□□ 2.05
TMEM260-202ENST00000538838 TOMM22Q9NS69 142 aa27.85■■■□□ 2.05
TMEM260-202ENST00000538838 PAPPA2Q9BXP8 1791 aa27.85■■■□□ 2.05
TMEM260-202ENST00000538838 SHMT1P34896 483 aa27.85■■■□□ 2.05
TMEM260-202ENST00000538838 FMR1Q06787 632 aaKnown RBP eCLIP27.85■■■□□ 2.05
TMEM260-202ENST00000538838 SWAP70Q9UH65 585 aa27.85■■■□□ 2.05
TMEM260-202ENST00000538838 TRPM7Q96QT4 1865 aa27.85■■■□□ 2.05
TMEM260-202ENST00000538838 FGRP09769 529 aa27.84■■■□□ 2.05
TMEM260-202ENST00000538838 SUPT20HL1Q3ZLR7 823 aa27.84■■■□□ 2.05
TMEM260-202ENST00000538838 RRP12Q5JTH9 1297 aaKnown RBP27.84■■■□□ 2.05
TMEM260-202ENST00000538838 NKX2-3Q8TAU0 364 aa27.84■■■□□ 2.05
TMEM260-202ENST00000538838 FZD1Q9UP38 647 aa27.84■■■□□ 2.05
TMEM260-202ENST00000538838 TBC1D12O60347 775 aa27.83■■■□□ 2.05
TMEM260-202ENST00000538838 ANAPC15P60006 121 aa27.83■■■□□ 2.05
TMEM260-202ENST00000538838 COL9A3Q14050 684 aaPredicted RBP27.83■■■□□ 2.05
TMEM260-202ENST00000538838 HOOK2Q96ED9 719 aa27.83■■■□□ 2.05
TMEM260-202ENST00000538838 MKNK2Q9HBH9 465 aa27.83■■■□□ 2.05
TMEM260-202ENST00000538838 ORC4O43929 436 aa27.82■■■□□ 2.04
TMEM260-202ENST00000538838 MAP3K10Q02779 954 aa27.82■■■□□ 2.04
TMEM260-202ENST00000538838 KRT32Q14532 448 aa27.82■■■□□ 2.04
TMEM260-202ENST00000538838 DCAF15Q66K64 600 aa27.82■■■□□ 2.04
TMEM260-202ENST00000538838 DOCK1Q14185 1865 aa27.82■■■□□ 2.04
TMEM260-202ENST00000538838 GREB1LQ9C091 1923 aaPredicted RBP27.82■■■□□ 2.04
TMEM260-202ENST00000538838 B4E1Z4 1266 aa27.81■■■□□ 2.04
TMEM260-202ENST00000538838 PCP11498 1178 aaKnown RBP27.81■■■□□ 2.04
TMEM260-202ENST00000538838 RASA1P20936 1047 aa27.81■■■□□ 2.04
TMEM260-202ENST00000538838 JAKMIP1Q96N16 626 aaKnown RBP27.81■■■□□ 2.04
TMEM260-202ENST00000538838 ZNF287Q9HBT7 754 aa27.81■■■□□ 2.04
TMEM260-202ENST00000538838 PRKG1Q13976 671 aa27.81■■■□□ 2.04
TMEM260-202ENST00000538838 TATDN1Q6P1N9 297 aa27.81■■■□□ 2.04
TMEM260-202ENST00000538838 CNNM2Q9H8M5 875 aa27.81■■■□□ 2.04
TMEM260-202ENST00000538838 TAOK2Q9UL54 1235 aa27.81■■■□□ 2.04
TMEM260-202ENST00000538838 ITGBL1O95965 494 aaPredicted RBP27.8■■■□□ 2.04
TMEM260-202ENST00000538838 NF2P35240 595 aa27.8■■■□□ 2.04
TMEM260-202ENST00000538838 TRDNQ13061 729 aa27.8■■■□□ 2.04
TMEM260-202ENST00000538838 RRP1BQ14684 758 aaKnown RBP27.8■■■□□ 2.04
TMEM260-202ENST00000538838 RALYLQ86SE5 291 aaKnown RBP27.8■■■□□ 2.04
TMEM260-202ENST00000538838 NCOA7Q8NI08 942 aa27.8■■■□□ 2.04
TMEM260-202ENST00000538838 KIF2CQ99661 725 aa27.8■■■□□ 2.04
TMEM260-202ENST00000538838 KRT23Q9C075 422 aa27.8■■■□□ 2.04
TMEM260-202ENST00000538838 ZNF408Q9H9D4 720 aa27.8■■■□□ 2.04
TMEM260-202ENST00000538838 RANBP6O60518 1105 aaKnown RBP27.79■■■□□ 2.04
TMEM260-202ENST00000538838 IL17RAQ96F46 866 aa27.79■■■□□ 2.04
TMEM260-202ENST00000538838 NEK1Q96PY6 1258 aa27.79■■■□□ 2.04
TMEM260-202ENST00000538838 ZNF341Q9BYN7 854 aa27.79■■■□□ 2.04
TMEM260-202ENST00000538838 KDM4AO75164 1064 aa27.78■■■□□ 2.04
TMEM260-202ENST00000538838 SHROOM1Q2M3G4 852 aaPredicted RBP27.78■■■□□ 2.04
TMEM260-202ENST00000538838 FAM47AQ5JRC9 791 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms