RNA–Protein interactions for RNA: ENST00000523203.5

CSNK1A1-208, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 5

Gene CSNK1A1, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-208ENST00000523203 MAP4K4O95819 1239 aaPredicted RBP12.61□□□□□ -0.39
CSNK1A1-208ENST00000523203 SLURP2P0DP57 97 aa12.61□□□□□ -0.39
CSNK1A1-208ENST00000523203 GJA8P48165 433 aa12.61□□□□□ -0.39
CSNK1A1-208ENST00000523203 FXR1P51114 621 aaKnown RBP eCLIP12.61□□□□□ -0.39
CSNK1A1-208ENST00000523203 RHBDL3P58872 404 aa12.61□□□□□ -0.39
CSNK1A1-208ENST00000523203 G3BP1Q13283 466 aaKnown RBP eCLIP12.61□□□□□ -0.39
CSNK1A1-208ENST00000523203 CEP85Q6P2H3 762 aa12.61□□□□□ -0.39
CSNK1A1-208ENST00000523203 SPATA5Q8NB90 893 aa12.61□□□□□ -0.39
CSNK1A1-208ENST00000523203 SHISA4Q96DD7 197 aa12.61□□□□□ -0.39
CSNK1A1-208ENST00000523203 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.61□□□□□ -0.39
CSNK1A1-208ENST00000523203 HMG20BQ9P0W2 317 aa12.61□□□□□ -0.39
CSNK1A1-208ENST00000523203 GABRQQ9UN88 632 aa12.61□□□□□ -0.39
CSNK1A1-208ENST00000523203 TNPO2O14787 897 aaKnown RBP12.6□□□□□ -0.39
CSNK1A1-208ENST00000523203 ADCY3O60266 1144 aa12.6□□□□□ -0.39
CSNK1A1-208ENST00000523203 ATP8B2P98198 1209 aa12.6□□□□□ -0.39
CSNK1A1-208ENST00000523203 TBC1D9Q6ZT07 1266 aa12.6□□□□□ -0.39
CSNK1A1-208ENST00000523203 NSUN4Q96CB9 384 aaKnown RBP12.6□□□□□ -0.39
CSNK1A1-208ENST00000523203 HTATIP2Q9BUP3 242 aa12.6□□□□□ -0.39
CSNK1A1-208ENST00000523203 OSBPL5Q9H0X9 879 aaPredicted RBP12.6□□□□□ -0.39
CSNK1A1-208ENST00000523203 RAI14Q9P0K7 980 aa12.6□□□□□ -0.39
CSNK1A1-208ENST00000523203 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.6□□□□□ -0.39
CSNK1A1-208ENST00000523203 AGTPBP1Q9UPW5 1226 aa12.6□□□□□ -0.39
CSNK1A1-208ENST00000523203 ATAD5Q96QE3 1844 aa12.6□□□□□ -0.39
CSNK1A1-208ENST00000523203 UQCRFS1P1P0C7P4 283 aa12.59□□□□□ -0.39
CSNK1A1-208ENST00000523203 FLT3LGP49771 235 aa12.59□□□□□ -0.39
CSNK1A1-208ENST00000523203 PI16Q6UXB8 463 aa12.59□□□□□ -0.39
CSNK1A1-208ENST00000523203 CCDC84Q86UT8 332 aaPredicted RBP12.59□□□□□ -0.39
CSNK1A1-208ENST00000523203 PROCA1Q8NCQ7 364 aaPredicted RBP12.59□□□□□ -0.39
CSNK1A1-208ENST00000523203 ZNF384Q8TF68 577 aa12.59□□□□□ -0.39
CSNK1A1-208ENST00000523203 COA7Q96BR5 231 aa12.59□□□□□ -0.39
CSNK1A1-208ENST00000523203 NOL10Q9BSC4 688 aaKnown RBP12.59□□□□□ -0.39
CSNK1A1-208ENST00000523203 UNC93B1Q9H1C4 597 aa12.59□□□□□ -0.39
CSNK1A1-208ENST00000523203 CHMP4BQ9H444 224 aaKnown RBP12.59□□□□□ -0.39
CSNK1A1-208ENST00000523203 LRP2BPQ9P2M1 347 aa12.59□□□□□ -0.39
CSNK1A1-208ENST00000523203 PNMA3Q9UL41 463 aa12.59□□□□□ -0.39
CSNK1A1-208ENST00000523203 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.59□□□□□ -0.39
CSNK1A1-208ENST00000523203 FAM196BA6NMK8 535 aa12.58□□□□□ -0.4
CSNK1A1-208ENST00000523203 SGPL1O95470 568 aa12.58□□□□□ -0.4
CSNK1A1-208ENST00000523203 ELNP15502 786 aa12.58□□□□□ -0.4
CSNK1A1-208ENST00000523203 ARID4AP29374 1257 aaPredicted RBP12.58□□□□□ -0.4
CSNK1A1-208ENST00000523203 SPP2Q13103 211 aa12.58□□□□□ -0.4
CSNK1A1-208ENST00000523203 IRF5Q13568 498 aa12.58□□□□□ -0.4
CSNK1A1-208ENST00000523203 POLA2Q14181 598 aa12.58□□□□□ -0.4
CSNK1A1-208ENST00000523203 UBE2Q1Q7Z7E8 422 aa12.58□□□□□ -0.4
CSNK1A1-208ENST00000523203 SIRT2Q8IXJ6 389 aa12.58□□□□□ -0.4
CSNK1A1-208ENST00000523203 TEX11Q8IYF3 940 aa12.58□□□□□ -0.4
CSNK1A1-208ENST00000523203 ANKRD13CQ8N6S4 541 aa12.58□□□□□ -0.4
CSNK1A1-208ENST00000523203 SSH3Q8TE77 659 aa12.58□□□□□ -0.4
CSNK1A1-208ENST00000523203 PXYLP1Q8TE99 480 aa12.58□□□□□ -0.4
CSNK1A1-208ENST00000523203 U2AF1L4Q8WU68 220 aaKnown RBP12.58□□□□□ -0.4
CSNK1A1-208ENST00000523203 TBC1D2Q9BYX2 928 aa12.58□□□□□ -0.4
CSNK1A1-208ENST00000523203 TAOK2Q9UL54 1235 aa12.58□□□□□ -0.4
CSNK1A1-208ENST00000523203 FARP2O94887 1054 aaPredicted RBP12.57□□□□□ -0.4
CSNK1A1-208ENST00000523203 TFRCP02786 760 aaKnown RBP12.57□□□□□ -0.4
CSNK1A1-208ENST00000523203 INHAP05111 366 aa12.57□□□□□ -0.4
CSNK1A1-208ENST00000523203 CAPN2P17655 700 aa12.57□□□□□ -0.4
CSNK1A1-208ENST00000523203 CAP2P40123 477 aa12.57□□□□□ -0.4
CSNK1A1-208ENST00000523203 MCAMP43121 646 aa12.57□□□□□ -0.4
CSNK1A1-208ENST00000523203 PABPC4Q13310 644 aaKnown RBP eCLIP12.57□□□□□ -0.4
CSNK1A1-208ENST00000523203 FAM110CQ1W6H9 321 aa12.57□□□□□ -0.4
CSNK1A1-208ENST00000523203 TREML2Q5T2D2 321 aa12.57□□□□□ -0.4
CSNK1A1-208ENST00000523203 CHRDL2Q6WN34 429 aa12.57□□□□□ -0.4
CSNK1A1-208ENST00000523203 ZNF280CQ8ND82 737 aa12.57□□□□□ -0.4
CSNK1A1-208ENST00000523203 HERC5Q9UII4 1024 aaKnown RBP12.57□□□□□ -0.4
CSNK1A1-208ENST00000523203 PCDHB15Q9Y5E8 787 aa12.57□□□□□ -0.4
CSNK1A1-208ENST00000523203 NR2E3Q9Y5X4 410 aa12.57□□□□□ -0.4
CSNK1A1-208ENST00000523203 COL2A1P02458 1487 aaPredicted RBP12.57□□□□□ -0.4
CSNK1A1-208ENST00000523203 USP17L5A8MUK1 530 aa12.56□□□□□ -0.4
CSNK1A1-208ENST00000523203 BAG3O95817 575 aa12.56□□□□□ -0.4
CSNK1A1-208ENST00000523203 PLCG2P16885 1265 aa12.56□□□□□ -0.4
CSNK1A1-208ENST00000523203 GCLCP48506 637 aaPredicted RBP12.56□□□□□ -0.4
CSNK1A1-208ENST00000523203 HMGCS2P54868 508 aa12.56□□□□□ -0.4
CSNK1A1-208ENST00000523203 TTC39AQ5SRH9 613 aa12.56□□□□□ -0.4
CSNK1A1-208ENST00000523203 NAA16Q6N069 864 aaPredicted RBP12.56□□□□□ -0.4
CSNK1A1-208ENST00000523203 RPAP2Q8IXW5 612 aaPredicted RBP12.56□□□□□ -0.4
CSNK1A1-208ENST00000523203 SH3RF3Q8TEJ3 882 aaPredicted RBP12.56□□□□□ -0.4
CSNK1A1-208ENST00000523203 PI4KBQ9UBF8 816 aa12.56□□□□□ -0.4
CSNK1A1-208ENST00000523203 LOC285556D6RIA3 1793 aa12.56□□□□□ -0.4
CSNK1A1-208ENST00000523203 RANBP2P49792 3224 aaKnown RBP12.55□□□□□ -0.4
CSNK1A1-208ENST00000523203 OS9Q13438 667 aaPredicted RBP12.55□□□□□ -0.4
CSNK1A1-208ENST00000523203 CCDC158Q5M9N0 1113 aa12.55□□□□□ -0.4
CSNK1A1-208ENST00000523203 DEFB118Q96PH6 123 aa12.55□□□□□ -0.4
CSNK1A1-208ENST00000523203 DHX36Q9H2U1 1008 aaKnown RBP12.55□□□□□ -0.4
CSNK1A1-208ENST00000523203 AS3MTQ9HBK9 375 aa12.55□□□□□ -0.4
CSNK1A1-208ENST00000523203 SNRKQ9NRH2 765 aa12.55□□□□□ -0.4
CSNK1A1-208ENST00000523203 AATFQ9NY61 560 aaKnown RBP eCLIP12.55□□□□□ -0.4
CSNK1A1-208ENST00000523203 EXOC6BQ9Y2D4 811 aa12.55□□□□□ -0.4
CSNK1A1-208ENST00000523203 MYO5AQ9Y4I1 1855 aaKnown RBP12.55□□□□□ -0.4
CSNK1A1-208ENST00000523203 SURF6O75683 361 aaKnown RBP12.54□□□□□ -0.4
CSNK1A1-208ENST00000523203 RRP1BQ14684 758 aaKnown RBP12.54□□□□□ -0.4
CSNK1A1-208ENST00000523203 TRIM34Q9BYJ4 488 aa12.54□□□□□ -0.4
CSNK1A1-208ENST00000523203 ASCC2Q9H1I8 757 aaPredicted RBP12.54□□□□□ -0.4
CSNK1A1-208ENST00000523203 GPR108Q9NPR9 543 aa12.54□□□□□ -0.4
CSNK1A1-208ENST00000523203 RBM27Q9P2N5 1060 aaKnown RBP12.54□□□□□ -0.4
CSNK1A1-208ENST00000523203 CDK5RAP2Q96SN8 1893 aa12.54□□□□□ -0.4
CSNK1A1-208ENST00000523203 EVI5O60447 810 aa12.53□□□□□ -0.4
CSNK1A1-208ENST00000523203 ASNSP08243 561 aa12.53□□□□□ -0.4
CSNK1A1-208ENST00000523203 PPP4CP60510 307 aa12.53□□□□□ -0.4
CSNK1A1-208ENST00000523203 TNNI3KQ59H18 835 aa12.53□□□□□ -0.4
CSNK1A1-208ENST00000523203 SH3D19Q5HYK7 790 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms