RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 ZSCAN29Q8IWY8 852 aaPredicted RBP16.86■□□□□ 0.29
RNF4-208ENST00000507247 AMOTL1Q8IY63 956 aa16.86■□□□□ 0.29
RNF4-208ENST00000507247 DCPSQ96C86 337 aaKnown RBP16.86■□□□□ 0.29
RNF4-208ENST00000507247 DEFB129Q9H1M3 183 aa16.86■□□□□ 0.29
RNF4-208ENST00000507247 DHX36Q9H2U1 1008 aaKnown RBP16.86■□□□□ 0.29
RNF4-208ENST00000507247 INCENPQ9NQS7 918 aa16.86■□□□□ 0.29
RNF4-208ENST00000507247 ADM5C9JUS6 153 aa16.85■□□□□ 0.29
RNF4-208ENST00000507247 HLA-DOAP06340 250 aa16.85■□□□□ 0.29
RNF4-208ENST00000507247 GABPAQ06546 454 aa16.85■□□□□ 0.29
RNF4-208ENST00000507247 COL9A3Q14050 684 aaPredicted RBP16.85■□□□□ 0.29
RNF4-208ENST00000507247 ADCK5Q3MIX3 580 aa16.85■□□□□ 0.29
RNF4-208ENST00000507247 TSGA10IPQ3SY00 556 aa16.85■□□□□ 0.29
RNF4-208ENST00000507247 DLK2Q6UY11 383 aa16.85■□□□□ 0.29
RNF4-208ENST00000507247 SLC44A5Q8NCS7 719 aa16.85■□□□□ 0.29
RNF4-208ENST00000507247 NKX2-3Q8TAU0 364 aa16.85■□□□□ 0.29
RNF4-208ENST00000507247 KIF2CQ99661 725 aa16.85■□□□□ 0.29
RNF4-208ENST00000507247 DNAJC18Q9H819 358 aa16.85■□□□□ 0.29
RNF4-208ENST00000507247 NEDD4P46934 1319 aa16.85■□□□□ 0.29
RNF4-208ENST00000507247 CEP350Q5VT06 3117 aa16.85■□□□□ 0.29
RNF4-208ENST00000507247 E7EWF7 191 aa16.84■□□□□ 0.29
RNF4-208ENST00000507247 AKNAD1Q5T1N1 836 aa16.84■□□□□ 0.29
RNF4-208ENST00000507247 PRAMEF18Q5VWM3 479 aa16.84■□□□□ 0.29
RNF4-208ENST00000507247 STAG1Q8WVM7 1258 aa16.84■□□□□ 0.29
RNF4-208ENST00000507247 IL17RAQ96F46 866 aa16.84■□□□□ 0.29
RNF4-208ENST00000507247 CSRNP1Q96S65 589 aa16.84■□□□□ 0.29
RNF4-208ENST00000507247 EHD4Q9H223 541 aa16.84■□□□□ 0.29
RNF4-208ENST00000507247 CLEC11AQ9Y240 323 aa16.84■□□□□ 0.29
RNF4-208ENST00000507247 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.84■□□□□ 0.29
RNF4-208ENST00000507247 SSC5DA1L4H1 1573 aa16.84■□□□□ 0.29
RNF4-208ENST00000507247 FAM196BA6NMK8 535 aa16.83■□□□□ 0.28
RNF4-208ENST00000507247 FGRP09769 529 aa16.83■□□□□ 0.28
RNF4-208ENST00000507247 ZKSCAN1P17029 563 aaPredicted RBP16.83■□□□□ 0.28
RNF4-208ENST00000507247 ANAPC15P60006 121 aa16.83■□□□□ 0.28
RNF4-208ENST00000507247 NBPF12Q5TAG4 269 aaPredicted RBP16.83■□□□□ 0.28
RNF4-208ENST00000507247 C16orf86Q6ZW13 317 aa16.83■□□□□ 0.28
RNF4-208ENST00000507247 KRT26Q7Z3Y9 468 aa16.83■□□□□ 0.28
RNF4-208ENST00000507247 METTL16Q86W50 562 aaKnown RBP16.83■□□□□ 0.28
RNF4-208ENST00000507247 SULF1Q8IWU6 871 aa16.83■□□□□ 0.28
RNF4-208ENST00000507247 GLIS2Q9BZE0 524 aaPredicted RBP16.83■□□□□ 0.28
RNF4-208ENST00000507247 PI4KBQ9UBF8 816 aa16.83■□□□□ 0.28
RNF4-208ENST00000507247 SERPINB13Q9UIV8 391 aa16.83■□□□□ 0.28
RNF4-208ENST00000507247 PPP2R3BQ9Y5P8 575 aa16.83■□□□□ 0.28
RNF4-208ENST00000507247 PRDM1O75626 825 aa16.82■□□□□ 0.28
RNF4-208ENST00000507247 CDK8P49336 464 aa16.82■□□□□ 0.28
RNF4-208ENST00000507247 MAP1SQ66K74 1059 aaPredicted RBP16.82■□□□□ 0.28
RNF4-208ENST00000507247 USP48Q86UV5 1035 aa16.82■□□□□ 0.28
RNF4-208ENST00000507247 LDHDQ86WU2 507 aa16.82■□□□□ 0.28
RNF4-208ENST00000507247 GREB1LQ9C091 1923 aaPredicted RBP16.81■□□□□ 0.28
RNF4-208ENST00000507247 SLC3A2P08195 630 aaKnown RBP16.81■□□□□ 0.28
RNF4-208ENST00000507247 SHMT1P34896 483 aa16.81■□□□□ 0.28
RNF4-208ENST00000507247 MFSD6Q6ZSS7 791 aa16.81■□□□□ 0.28
RNF4-208ENST00000507247 FOXP4Q8IVH2 680 aaPredicted RBP16.81■□□□□ 0.28
RNF4-208ENST00000507247 RBM46Q8TBY0 533 aaKnown RBP16.81■□□□□ 0.28
RNF4-208ENST00000507247 JAKMIP1Q96N16 626 aaKnown RBP16.81■□□□□ 0.28
RNF4-208ENST00000507247 ATAD5Q96QE3 1844 aa16.81■□□□□ 0.28
RNF4-208ENST00000507247 PAPPA2Q9BXP8 1791 aa16.8■□□□□ 0.28
RNF4-208ENST00000507247 B4E1Z4 1266 aa16.8■□□□□ 0.28
RNF4-208ENST00000507247 ORC4O43929 436 aa16.8■□□□□ 0.28
RNF4-208ENST00000507247 CPA1P15085 419 aa16.8■□□□□ 0.28
RNF4-208ENST00000507247 HTRA3P83110 453 aa16.8■□□□□ 0.28
RNF4-208ENST00000507247 MAP3K10Q02779 954 aa16.8■□□□□ 0.28
RNF4-208ENST00000507247 PDE4BQ07343 736 aa16.8■□□□□ 0.28
RNF4-208ENST00000507247 KRT32Q14532 448 aa16.8■□□□□ 0.28
RNF4-208ENST00000507247 RRP12Q5JTH9 1297 aaKnown RBP16.8■□□□□ 0.28
RNF4-208ENST00000507247 CDC37L1Q7L3B6 337 aa16.8■□□□□ 0.28
RNF4-208ENST00000507247 MIGA2Q7L4E1 593 aa16.8■□□□□ 0.28
RNF4-208ENST00000507247 CRACR2BQ8N4Y2 399 aaPredicted RBP16.8■□□□□ 0.28
RNF4-208ENST00000507247 NEK1Q96PY6 1258 aa16.8■□□□□ 0.28
RNF4-208ENST00000507247 RNF41Q9H4P4 317 aaPredicted RBP16.8■□□□□ 0.28
RNF4-208ENST00000507247 SWAP70Q9UH65 585 aa16.8■□□□□ 0.28
RNF4-208ENST00000507247 OTOFQ9HC10 1997 aa16.79■□□□□ 0.28
RNF4-208ENST00000507247 PCP11498 1178 aaKnown RBP16.79■□□□□ 0.28
RNF4-208ENST00000507247 RASA1P20936 1047 aa16.79■□□□□ 0.28
RNF4-208ENST00000507247 MB21D2Q8IYB1 491 aaPredicted RBP16.79■□□□□ 0.28
RNF4-208ENST00000507247 NCOA7Q8NI08 942 aa16.79■□□□□ 0.28
RNF4-208ENST00000507247 CDCA5Q96FF9 252 aa16.79■□□□□ 0.28
RNF4-208ENST00000507247 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.79■□□□□ 0.28
RNF4-208ENST00000507247 TOMM22Q9NS69 142 aa16.79■□□□□ 0.28
RNF4-208ENST00000507247 HERC5Q9UII4 1024 aaKnown RBP16.79■□□□□ 0.28
RNF4-208ENST00000507247 TBC1D12O60347 775 aa16.78■□□□□ 0.28
RNF4-208ENST00000507247 CASTP20810 708 aaKnown RBP16.78■□□□□ 0.28
RNF4-208ENST00000507247 ANTXR2P58335 489 aa16.78■□□□□ 0.28
RNF4-208ENST00000507247 FMR1Q06787 632 aaKnown RBP eCLIP16.78■□□□□ 0.28
RNF4-208ENST00000507247 RRP1BQ14684 758 aaKnown RBP16.78■□□□□ 0.28
RNF4-208ENST00000507247 TATDN1Q6P1N9 297 aa16.78■□□□□ 0.28
RNF4-208ENST00000507247 CYB5R4Q7L1T6 521 aa16.78■□□□□ 0.28
RNF4-208ENST00000507247 TRIM34Q9BYJ4 488 aa16.78■□□□□ 0.28
RNF4-208ENST00000507247 UPF3BQ9BZI7 483 aaKnown RBP16.78■□□□□ 0.28
RNF4-208ENST00000507247 TM6SF1Q9BZW5 370 aa16.78■□□□□ 0.28
RNF4-208ENST00000507247 KRT23Q9C075 422 aa16.78■□□□□ 0.28
RNF4-208ENST00000507247 CNNM2Q9H8M5 875 aa16.78■□□□□ 0.28
RNF4-208ENST00000507247 MKNK2Q9HBH9 465 aa16.78■□□□□ 0.28
RNF4-208ENST00000507247 ZSWIM6Q9HCJ5 1215 aa16.78■□□□□ 0.28
RNF4-208ENST00000507247 FZD1Q9UP38 647 aa16.78■□□□□ 0.28
RNF4-208ENST00000507247 DOCK1Q14185 1865 aa16.78■□□□□ 0.28
RNF4-208ENST00000507247 TRPM7Q96QT4 1865 aa16.78■□□□□ 0.28
RNF4-208ENST00000507247 TRAF5O00463 557 aa16.77■□□□□ 0.28
RNF4-208ENST00000507247 KDM4AO75164 1064 aa16.77■□□□□ 0.28
RNF4-208ENST00000507247 PSMA5P28066 241 aa16.77■□□□□ 0.28
RNF4-208ENST00000507247 TRDNQ13061 729 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms