RNA–Protein interactions for RNA: ENST00000491407.1

PPP1R35-205, Transcript of protein phosphatase 1 regulatory subunit 35, human

TSL 5

Gene PPP1R35, Length 942 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1R35-205	ENST00000491407	CAPN2	P17655	700 aa		33.35	■■■□□ 2.93
PPP1R35-205	ENST00000491407	RFX7	Q2KHR2	1363 aa		33.34	■■■□□ 2.93
PPP1R35-205	ENST00000491407	PICALM	Q13492	652 aa		33.34	■■■□□ 2.93
PPP1R35-205	ENST00000491407	COA7	Q96BR5	231 aa		33.34	■■■□□ 2.93
PPP1R35-205	ENST00000491407	ABCF2	Q9UG63	623 aa		33.34	■■■□□ 2.93
PPP1R35-205	ENST00000491407		A0A1W2PPC1	479 aa		33.33	■■■□□ 2.93
PPP1R35-205	ENST00000491407	SURF6	O75683	361 aa	Known RBP	33.33	■■■□□ 2.93
PPP1R35-205	ENST00000491407	SLF2	Q8IX21	1173 aa		33.33	■■■□□ 2.93
PPP1R35-205	ENST00000491407	ANKRD13C	Q8N6S4	541 aa		33.33	■■■□□ 2.93
PPP1R35-205	ENST00000491407	DDX4	Q9NQI0	724 aa	Known RBP	33.33	■■■□□ 2.93
PPP1R35-205	ENST00000491407	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	33.33	■■■□□ 2.93
PPP1R35-205	ENST00000491407	AGTPBP1	Q9UPW5	1226 aa		33.33	■■■□□ 2.93
PPP1R35-205	ENST00000491407	ALPK3	Q96L96	1907 aa		33.33	■■■□□ 2.93
PPP1R35-205	ENST00000491407	OS9	Q13438	667 aa	Predicted RBP	33.32	■■■□□ 2.92
PPP1R35-205	ENST00000491407	MVP	Q14764	893 aa	Known RBP	33.32	■■■□□ 2.92
PPP1R35-205	ENST00000491407	CEP85	Q6P2H3	762 aa		33.32	■■■□□ 2.92
PPP1R35-205	ENST00000491407	CCDC84	Q86UT8	332 aa	Predicted RBP	33.32	■■■□□ 2.92
PPP1R35-205	ENST00000491407	PAK6	Q9NQU5	681 aa	Predicted RBP	33.32	■■■□□ 2.92
PPP1R35-205	ENST00000491407	COG6	Q9Y2V7	657 aa		33.32	■■■□□ 2.92
PPP1R35-205	ENST00000491407	RASGRF1	Q13972	1273 aa		33.31	■■■□□ 2.92
PPP1R35-205	ENST00000491407	BTD	P43251	543 aa		33.3	■■■□□ 2.92
PPP1R35-205	ENST00000491407	SLC17A8	Q8NDX2	589 aa		33.3	■■■□□ 2.92
PPP1R35-205	ENST00000491407	PAWR	Q96IZ0	340 aa	Known RBP	33.3	■■■□□ 2.92
PPP1R35-205	ENST00000491407	STAP2	Q9UGK3	403 aa		33.3	■■■□□ 2.92
PPP1R35-205	ENST00000491407	ZBTB22	O15209	634 aa		33.29	■■■□□ 2.92
PPP1R35-205	ENST00000491407	FAM163A	Q96GL9	167 aa	Predicted RBP	33.29	■■■□□ 2.92
PPP1R35-205	ENST00000491407	CRISPLD2	Q9H0B8	497 aa		33.29	■■■□□ 2.92
PPP1R35-205	ENST00000491407	PNMA3	Q9UL41	463 aa		33.29	■■■□□ 2.92
PPP1R35-205	ENST00000491407	TREML2	Q5T2D2	321 aa		33.28	■■■□□ 2.92
PPP1R35-205	ENST00000491407	GORAB	Q5T7V8	394 aa		33.28	■■■□□ 2.92
PPP1R35-205	ENST00000491407	SPTY2D1	Q68D10	685 aa	Predicted RBP	33.28	■■■□□ 2.92
PPP1R35-205	ENST00000491407	NOP58	Q9Y2X3	529 aa	Known RBP	33.28	■■■□□ 2.92
PPP1R35-205	ENST00000491407	SOX1	O00570	391 aa	Predicted RBP	33.27	■■■□□ 2.92
PPP1R35-205	ENST00000491407	FAM110C	Q1W6H9	321 aa		33.27	■■■□□ 2.92
PPP1R35-205	ENST00000491407	MROH7-TTC4	A0A0A0MT08	1334 aa		33.27	■■■□□ 2.92
PPP1R35-205	ENST00000491407	NECAB2	Q7Z6G3	386 aa		33.26	■■■□□ 2.91
PPP1R35-205	ENST00000491407	LRCH3	Q96II8	777 aa		33.26	■■■□□ 2.91
PPP1R35-205	ENST00000491407	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	33.26	■■■□□ 2.91
PPP1R35-205	ENST00000491407	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	33.26	■■■□□ 2.91
PPP1R35-205	ENST00000491407	DDX19B	Q9UMR2	479 aa		33.26	■■■□□ 2.91
PPP1R35-205	ENST00000491407	ATAD5	Q96QE3	1844 aa		33.25	■■■□□ 2.91
PPP1R35-205	ENST00000491407	DLL1	O00548	723 aa		33.25	■■■□□ 2.91
PPP1R35-205	ENST00000491407	PROCA1	Q8NCQ7	364 aa	Predicted RBP	33.25	■■■□□ 2.91
PPP1R35-205	ENST00000491407	DIS3L	Q8TF46	1054 aa	Known RBP	33.25	■■■□□ 2.91
PPP1R35-205	ENST00000491407	PDS5A	Q29RF7	1337 aa	Known RBP	33.25	■■■□□ 2.91
PPP1R35-205	ENST00000491407	FAM196B	A6NMK8	535 aa		33.24	■■■□□ 2.91
PPP1R35-205	ENST00000491407	TBC1D12	O60347	775 aa		33.24	■■■□□ 2.91
PPP1R35-205	ENST00000491407	TNNI3K	Q59H18	835 aa		33.24	■■■□□ 2.91
PPP1R35-205	ENST00000491407	GPR108	Q9NPR9	543 aa		33.24	■■■□□ 2.91
PPP1R35-205	ENST00000491407	FPGT-TNNI3K	V9GXZ4	949 aa		33.24	■■■□□ 2.91
PPP1R35-205	ENST00000491407	LOC285556	D6RIA3	1793 aa		33.24	■■■□□ 2.91
PPP1R35-205	ENST00000491407	SPP2	Q13103	211 aa		33.23	■■■□□ 2.91
PPP1R35-205	ENST00000491407	C20orf194	Q5TEA3	1177 aa		33.23	■■■□□ 2.91
PPP1R35-205	ENST00000491407	ERICH6	Q7L0X2	663 aa		33.23	■■■□□ 2.91
PPP1R35-205	ENST00000491407	ZBTB40	Q9NUA8	1239 aa		33.23	■■■□□ 2.91
PPP1R35-205	ENST00000491407	HMG20B	Q9P0W2	317 aa		33.23	■■■□□ 2.91
PPP1R35-205	ENST00000491407	GPR75-ASB3	A0A0A6YYF3	556 aa		33.22	■■■□□ 2.91
PPP1R35-205	ENST00000491407	RHBDL3	P58872	404 aa		33.22	■■■□□ 2.91
PPP1R35-205	ENST00000491407	MECOM	Q03112	1051 aa		33.22	■■■□□ 2.91
PPP1R35-205	ENST00000491407	PI16	Q6UXB8	463 aa		33.22	■■■□□ 2.91
PPP1R35-205	ENST00000491407	OSBPL5	Q9H0X9	879 aa	Predicted RBP	33.22	■■■□□ 2.91
PPP1R35-205	ENST00000491407	GCLC	P48506	637 aa	Predicted RBP	33.21	■■■□□ 2.91
PPP1R35-205	ENST00000491407	DBNDD2	Q9BQY9	259 aa		33.21	■■■□□ 2.91
PPP1R35-205	ENST00000491407	HMGCR	P04035	888 aa		33.2	■■■□□ 2.91
PPP1R35-205	ENST00000491407	ARID4A	P29374	1257 aa	Predicted RBP	33.2	■■■□□ 2.91
PPP1R35-205	ENST00000491407	C7orf61	Q8IZ16	206 aa		33.2	■■■□□ 2.91
PPP1R35-205	ENST00000491407	ANKLE1	Q8NAG6	615 aa		33.2	■■■□□ 2.91
PPP1R35-205	ENST00000491407	SPATA5	Q8NB90	893 aa		33.2	■■■□□ 2.91
PPP1R35-205	ENST00000491407	ZNF280C	Q8ND82	737 aa		33.2	■■■□□ 2.91
PPP1R35-205	ENST00000491407	EXOC6B	Q9Y2D4	811 aa		33.2	■■■□□ 2.91
PPP1R35-205	ENST00000491407	NPM3	O75607	178 aa	Known RBP	33.19	■■■□□ 2.9
PPP1R35-205	ENST00000491407	HMGCS2	P54868	508 aa		33.19	■■■□□ 2.9
PPP1R35-205	ENST00000491407	PABPC4	Q13310	644 aa	Known RBP eCLIP	33.19	■■■□□ 2.9	6e-9	■■□□□ 12.9
PPP1R35-205	ENST00000491407	PDE3A	Q14432	1141 aa		33.18	■■■□□ 2.9
PPP1R35-205	ENST00000491407	HMX1	Q9NP08	348 aa	Predicted RBP	33.18	■■■□□ 2.9
PPP1R35-205	ENST00000491407	UQCRFS1P1	P0C7P4	283 aa		33.17	■■■□□ 2.9
PPP1R35-205	ENST00000491407	MCAM	P43121	646 aa		33.17	■■■□□ 2.9
PPP1R35-205	ENST00000491407	TBC1D9	Q6ZT07	1266 aa		33.17	■■■□□ 2.9
PPP1R35-205	ENST00000491407	ZNF384	Q8TF68	577 aa		33.17	■■■□□ 2.9
PPP1R35-205	ENST00000491407	YTHDC1	Q96MU7	727 aa	Known RBP	33.17	■■■□□ 2.9
PPP1R35-205	ENST00000491407	GDF15	Q99988	308 aa		33.17	■■■□□ 2.9
PPP1R35-205	ENST00000491407	TBC1D2	Q9BYX2	928 aa		33.17	■■■□□ 2.9
PPP1R35-205	ENST00000491407	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	33.17	■■■□□ 2.9
PPP1R35-205	ENST00000491407	RPTOR	Q8N122	1335 aa		33.17	■■■□□ 2.9
PPP1R35-205	ENST00000491407	LDHC	P07864	332 aa		33.16	■■■□□ 2.9
PPP1R35-205	ENST00000491407	BMP8B	P34820	402 aa		33.16	■■■□□ 2.9
PPP1R35-205	ENST00000491407	TTC39A	Q5SRH9	613 aa		33.16	■■■□□ 2.9
PPP1R35-205	ENST00000491407	ASCC2	Q9H1I8	757 aa	Predicted RBP	33.16	■■■□□ 2.9
PPP1R35-205	ENST00000491407	GJD2	Q9UKL4	321 aa		33.16	■■■□□ 2.9
PPP1R35-205	ENST00000491407	DDX60L	Q5H9U9	1706 aa	Known RBP	33.16	■■■□□ 2.9
PPP1R35-205	ENST00000491407	PLXNB2	O15031	1838 aa		33.15	■■■□□ 2.9
PPP1R35-205	ENST00000491407	CAP2	P40123	477 aa		33.15	■■■□□ 2.9
PPP1R35-205	ENST00000491407	GSTO1	P78417	241 aa		33.15	■■■□□ 2.9
PPP1R35-205	ENST00000491407	TRIM32	Q13049	653 aa		33.15	■■■□□ 2.9
PPP1R35-205	ENST00000491407	CCDC158	Q5M9N0	1113 aa		33.15	■■■□□ 2.9
PPP1R35-205	ENST00000491407	SIRT2	Q8IXJ6	389 aa		33.15	■■■□□ 2.9
PPP1R35-205	ENST00000491407	RPAP2	Q8IXW5	612 aa	Predicted RBP	33.15	■■■□□ 2.9
PPP1R35-205	ENST00000491407	EAF2	Q96CJ1	260 aa	Predicted RBP	33.15	■■■□□ 2.9
PPP1R35-205	ENST00000491407	NBPF3	Q9H094	633 aa		33.15	■■■□□ 2.9
PPP1R35-205	ENST00000491407	CCDC8	Q9H0W5	538 aa	Predicted RBP	33.15	■■■□□ 2.9

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms