RNA–Protein interactions for RNA: ENST00000488459.1

HUWE1-212, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene HUWE1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-212ENST00000488459 GRIPAP1Q4V328 841 aa13.2□□□□□ -0.3
HUWE1-212ENST00000488459 STRIP1Q5VSL9 837 aa13.2□□□□□ -0.3
HUWE1-212ENST00000488459 APOA5Q6Q788 366 aa13.2□□□□□ -0.3
HUWE1-212ENST00000488459 CDC37L1Q7L3B6 337 aa13.2□□□□□ -0.3
HUWE1-212ENST00000488459 IQCA1Q86XH1 822 aa13.2□□□□□ -0.3
HUWE1-212ENST00000488459 KIAA0825Q8IV33 1275 aa13.2□□□□□ -0.3
HUWE1-212ENST00000488459 ZNF444Q8N0Y2 327 aaPredicted RBP13.2□□□□□ -0.3
HUWE1-212ENST00000488459 LARGE2Q8N3Y3 721 aa13.2□□□□□ -0.3
HUWE1-212ENST00000488459 TEKT1Q969V4 418 aa13.2□□□□□ -0.3
HUWE1-212ENST00000488459 ZNF277Q9NRM2 450 aaPredicted RBP13.2□□□□□ -0.3
HUWE1-212ENST00000488459 PIM2Q9P1W9 311 aa13.2□□□□□ -0.3
HUWE1-212ENST00000488459 CNPY2Q9Y2B0 182 aa13.2□□□□□ -0.3
HUWE1-212ENST00000488459 MYO5AQ9Y4I1 1855 aaKnown RBP13.2□□□□□ -0.3
HUWE1-212ENST00000488459 GAKO14976 1311 aa13.19□□□□□ -0.3
HUWE1-212ENST00000488459 TNKSO95271 1327 aa13.19□□□□□ -0.3
HUWE1-212ENST00000488459 CACNA1SQ13698 1873 aa13.19□□□□□ -0.3
HUWE1-212ENST00000488459 CDKL5O76039 1030 aa13.19□□□□□ -0.3
HUWE1-212ENST00000488459 KCNA3P22001 575 aa13.19□□□□□ -0.3
HUWE1-212ENST00000488459 ADD1P35611 737 aaKnown RBP13.19□□□□□ -0.3
HUWE1-212ENST00000488459 CRKP46108 304 aa13.19□□□□□ -0.3
HUWE1-212ENST00000488459 RHBDL3P58872 404 aa13.19□□□□□ -0.3
HUWE1-212ENST00000488459 TGFB2P61812 414 aa13.19□□□□□ -0.3
HUWE1-212ENST00000488459 TFAP4Q01664 338 aa13.19□□□□□ -0.3
HUWE1-212ENST00000488459 DALRD3Q5D0E6 543 aaKnown RBP13.19□□□□□ -0.3
HUWE1-212ENST00000488459 IFIT1BQ5T764 474 aaKnown RBP13.19□□□□□ -0.3
HUWE1-212ENST00000488459 SGMS1Q86VZ5 419 aa13.19□□□□□ -0.3
HUWE1-212ENST00000488459 GDPD2Q9HCC8 539 aa13.19□□□□□ -0.3
HUWE1-212ENST00000488459 LMBRD1Q9NUN5 540 aa13.19□□□□□ -0.3
HUWE1-212ENST00000488459 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.19□□□□□ -0.3
HUWE1-212ENST00000488459 PLCD1P51178 756 aa13.18□□□□□ -0.3
HUWE1-212ENST00000488459 DNM1Q05193 864 aaKnown RBP13.18□□□□□ -0.3
HUWE1-212ENST00000488459 GSE1Q14687 1217 aa13.18□□□□□ -0.3
HUWE1-212ENST00000488459 RTN1Q16799 776 aa13.18□□□□□ -0.3
HUWE1-212ENST00000488459 DACT2Q5SW24 774 aa13.18□□□□□ -0.3
HUWE1-212ENST00000488459 CATIPQ7Z7H3 387 aa13.18□□□□□ -0.3
HUWE1-212ENST00000488459 USP48Q86UV5 1035 aa13.18□□□□□ -0.3
HUWE1-212ENST00000488459 ZNF654Q8IZM8 581 aa13.18□□□□□ -0.3
HUWE1-212ENST00000488459 C8orf76Q96K31 380 aa13.18□□□□□ -0.3
HUWE1-212ENST00000488459 MTA3Q9BTC8 594 aa13.18□□□□□ -0.3
HUWE1-212ENST00000488459 MKRN1Q9UHC7 482 aaKnown RBP13.18□□□□□ -0.3
HUWE1-212ENST00000488459 FLT1P17948 1338 aa13.17□□□□□ -0.3
HUWE1-212ENST00000488459 COL11A2P13942 1736 aaPredicted RBP13.17□□□□□ -0.3
HUWE1-212ENST00000488459 FIBPO43427 364 aa13.17□□□□□ -0.3
HUWE1-212ENST00000488459 NMT2O60551 498 aa13.17□□□□□ -0.3
HUWE1-212ENST00000488459 FGRP09769 529 aa13.17□□□□□ -0.3
HUWE1-212ENST00000488459 FDPSP14324 419 aaKnown RBP13.17□□□□□ -0.3
HUWE1-212ENST00000488459 CDC27P30260 824 aa13.17□□□□□ -0.3
HUWE1-212ENST00000488459 IARSP41252 1262 aaKnown RBP13.17□□□□□ -0.3
HUWE1-212ENST00000488459 SSRP1Q08945 709 aaKnown RBP13.17□□□□□ -0.3
HUWE1-212ENST00000488459 SOGA3Q5TF21 947 aa13.17□□□□□ -0.3
HUWE1-212ENST00000488459 OTUD7BQ6GQQ9 843 aa13.17□□□□□ -0.3
HUWE1-212ENST00000488459 CDC42EP5Q6NZY7 148 aa13.17□□□□□ -0.3
HUWE1-212ENST00000488459 HHIPL2Q6UWX4 724 aa13.17□□□□□ -0.3
HUWE1-212ENST00000488459 ENAHQ8N8S7 591 aaPredicted RBP13.17□□□□□ -0.3
HUWE1-212ENST00000488459 SLC44A5Q8NCS7 719 aa13.17□□□□□ -0.3
HUWE1-212ENST00000488459 UPF1Q92900 1129 aaKnown RBP eCLIP13.17□□□□□ -0.3
HUWE1-212ENST00000488459 PHKBQ93100 1093 aa13.17□□□□□ -0.3
HUWE1-212ENST00000488459 SLC26A6Q9BXS9 759 aa13.17□□□□□ -0.3
HUWE1-212ENST00000488459 ZNF287Q9HBT7 754 aa13.17□□□□□ -0.3
HUWE1-212ENST00000488459 DUOX1Q9NRD9 1551 aa13.16□□□□□ -0.3
HUWE1-212ENST00000488459 CCDC196A0A1B0GTZ2 297 aa13.16□□□□□ -0.3
HUWE1-212ENST00000488459 RAD17O75943 681 aa13.16□□□□□ -0.3
HUWE1-212ENST00000488459 TSPY3P0CV98 308 aa13.16□□□□□ -0.3
HUWE1-212ENST00000488459 TSPY8P0CW00 308 aa13.16□□□□□ -0.3
HUWE1-212ENST00000488459 DEKP35659 375 aaKnown RBP13.16□□□□□ -0.3
HUWE1-212ENST00000488459 FKBP1AP62942 108 aaKnown RBP13.16□□□□□ -0.3
HUWE1-212ENST00000488459 SEC23AQ15436 765 aa13.16□□□□□ -0.3
HUWE1-212ENST00000488459 CSPP1Q1MSJ5 1256 aa13.16□□□□□ -0.3
HUWE1-212ENST00000488459 FAM173BQ6P4H8 233 aa13.16□□□□□ -0.3
HUWE1-212ENST00000488459 TTC6Q86TZ1 520 aa13.16□□□□□ -0.3
HUWE1-212ENST00000488459 NIM1KQ8IY84 436 aa13.16□□□□□ -0.3
HUWE1-212ENST00000488459 CCDC82Q8N4S0 544 aa13.16□□□□□ -0.3
HUWE1-212ENST00000488459 FANCBQ8NB91 859 aa13.16□□□□□ -0.3
HUWE1-212ENST00000488459 ALG1Q9BT22 464 aa13.16□□□□□ -0.3
HUWE1-212ENST00000488459 TFIP11Q9UBB9 837 aaKnown RBP13.16□□□□□ -0.3
HUWE1-212ENST00000488459 LRRC37AA6NMS7 1700 aa13.16□□□□□ -0.3
HUWE1-212ENST00000488459 CDK8P49336 464 aa13.15□□□□□ -0.3
HUWE1-212ENST00000488459 KRT85P78386 507 aa13.15□□□□□ -0.3
HUWE1-212ENST00000488459 RESTQ13127 1097 aa13.15□□□□□ -0.3
HUWE1-212ENST00000488459 TRIM29Q14134 588 aa13.15□□□□□ -0.3
HUWE1-212ENST00000488459 CCDC178Q5BJE1 867 aa13.15□□□□□ -0.3
HUWE1-212ENST00000488459 APOBEC3HQ6NTF7 200 aaKnown RBP13.15□□□□□ -0.3
HUWE1-212ENST00000488459 TRIM22Q8IYM9 498 aa13.15□□□□□ -0.3
HUWE1-212ENST00000488459 PSMD1Q99460 953 aa13.15□□□□□ -0.3
HUWE1-212ENST00000488459 KAT14Q9H8E8 782 aa13.15□□□□□ -0.3
HUWE1-212ENST00000488459 FAM217BQ9NTX9 383 aaPredicted RBP13.15□□□□□ -0.3
HUWE1-212ENST00000488459 EP400Q96L91 3159 aa13.15□□□□□ -0.3
HUWE1-212ENST00000488459 YDJCA8MPS7 323 aa13.14□□□□□ -0.31
HUWE1-212ENST00000488459 GADD45BO75293 160 aaPredicted RBP13.14□□□□□ -0.31
HUWE1-212ENST00000488459 CALM1P0DP23 149 aa13.14□□□□□ -0.31
HUWE1-212ENST00000488459 CALM2P0DP24 149 aa13.14□□□□□ -0.31
HUWE1-212ENST00000488459 CALM3P0DP25 149 aa13.14□□□□□ -0.31
HUWE1-212ENST00000488459 CACNB3P54284 484 aa13.14□□□□□ -0.31
HUWE1-212ENST00000488459 AKAP17AQ02040 695 aaKnown RBP13.14□□□□□ -0.31
HUWE1-212ENST00000488459 CMTR1Q8N1G2 835 aaKnown RBP13.14□□□□□ -0.31
HUWE1-212ENST00000488459 WASF1Q92558 559 aa13.14□□□□□ -0.31
HUWE1-212ENST00000488459 ZDHHC15Q96MV8 337 aa13.14□□□□□ -0.31
HUWE1-212ENST00000488459 ZSCAN16Q9H4T2 348 aaPredicted RBP13.14□□□□□ -0.31
HUWE1-212ENST00000488459 DDX4Q9NQI0 724 aaKnown RBP13.14□□□□□ -0.31
HUWE1-212ENST00000488459 MTMR7Q9Y216 660 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms