RNA–Protein interactions for RNA: ENST00000486812.5

PRDM15-212, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 7,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-212ENST00000486812 ABCB6Q9NP58 842 aa11.47□□□□□ -0.57
PRDM15-212ENST00000486812 SYNRGQ9UMZ2 1314 aa11.47□□□□□ -0.57
PRDM15-212ENST00000486812 TPP2P29144 1249 aaPredicted RBP11.47□□□□□ -0.57
PRDM15-212ENST00000486812 SYCE1Q8N0S2 351 aa11.47□□□□□ -0.57
PRDM15-212ENST00000486812 AATFQ9NY61 560 aaKnown RBP eCLIP11.47□□□□□ -0.57
PRDM15-212ENST00000486812 ATP6V0A2Q9Y487 856 aa11.47□□□□□ -0.57
PRDM15-212ENST00000486812 HNRNPH1P31943 449 aaKnown RBP11.47□□□□□ -0.57
PRDM15-212ENST00000486812 KIAA2013Q8IYS2 634 aa11.47□□□□□ -0.57
PRDM15-212ENST00000486812 RBM8AQ9Y5S9 174 aaKnown RBP11.47□□□□□ -0.57
PRDM15-212ENST00000486812 SCP2P22307 547 aa11.46□□□□□ -0.57
PRDM15-212ENST00000486812 CARMIL2Q6F5E8 1435 aa11.46□□□□□ -0.57
PRDM15-212ENST00000486812 TPD52L2O43399 206 aaKnown RBP11.46□□□□□ -0.57
PRDM15-212ENST00000486812 ZNF449Q6P9G9 518 aa11.46□□□□□ -0.57
PRDM15-212ENST00000486812 Q6ZUG5 572 aa11.46□□□□□ -0.57
PRDM15-212ENST00000486812 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.46□□□□□ -0.58
PRDM15-212ENST00000486812 GAS8O95995 478 aa11.46□□□□□ -0.58
PRDM15-212ENST00000486812 RMI1Q9H9A7 625 aa11.46□□□□□ -0.58
PRDM15-212ENST00000486812 PPP1R1BQ9UD71 204 aaPredicted RBP11.46□□□□□ -0.58
PRDM15-212ENST00000486812 KRT10P13645 584 aa11.46□□□□□ -0.58
PRDM15-212ENST00000486812 KRT9P35527 623 aa11.46□□□□□ -0.58
PRDM15-212ENST00000486812 FBXW10Q5XX13 1052 aa11.46□□□□□ -0.58
PRDM15-212ENST00000486812 UBL4BQ8N7F7 174 aa11.46□□□□□ -0.58
PRDM15-212ENST00000486812 RILPQ96NA2 401 aa11.46□□□□□ -0.58
PRDM15-212ENST00000486812 RPS6KA1Q15418 735 aa11.45□□□□□ -0.58
PRDM15-212ENST00000486812 NUDCD3Q8IVD9 361 aa11.45□□□□□ -0.58
PRDM15-212ENST00000486812 NCOA7Q8NI08 942 aa11.45□□□□□ -0.58
PRDM15-212ENST00000486812 CACTINQ8WUQ7 758 aaKnown RBP11.45□□□□□ -0.58
PRDM15-212ENST00000486812 TMEM110-MUSTN1A8MSY1 372 aa11.45□□□□□ -0.58
PRDM15-212ENST00000486812 MCM7P33993 719 aa11.45□□□□□ -0.58
PRDM15-212ENST00000486812 SKOR1P84550 965 aa11.45□□□□□ -0.58
PRDM15-212ENST00000486812 CCDC80Q76M96 950 aa11.45□□□□□ -0.58
PRDM15-212ENST00000486812 NRBF2Q96F24 287 aa11.45□□□□□ -0.58
PRDM15-212ENST00000486812 TADA3O75528 432 aa11.45□□□□□ -0.58
PRDM15-212ENST00000486812 KRT15P19012 456 aa11.45□□□□□ -0.58
PRDM15-212ENST00000486812 CCDC159P0C7I6 412 aa11.45□□□□□ -0.58
PRDM15-212ENST00000486812 IL9RQ01113 521 aa11.45□□□□□ -0.58
PRDM15-212ENST00000486812 TTF1Q15361 905 aaPredicted RBP11.45□□□□□ -0.58
PRDM15-212ENST00000486812 PRPF38AQ8NAV1 312 aaKnown RBP11.45□□□□□ -0.58
PRDM15-212ENST00000486812 CTNND2Q9UQB3 1225 aa11.45□□□□□ -0.58
PRDM15-212ENST00000486812 MEFVO15553 781 aaPredicted RBP11.45□□□□□ -0.58
PRDM15-212ENST00000486812 DKC1O60832 514 aaKnown RBP eCLIP11.45□□□□□ -0.58
PRDM15-212ENST00000486812 PPARDQ03181 441 aa11.45□□□□□ -0.58
PRDM15-212ENST00000486812 GJC2Q5T442 439 aaPredicted RBP11.45□□□□□ -0.58
PRDM15-212ENST00000486812 KRI1Q8N9T8 703 aaKnown RBP11.45□□□□□ -0.58
PRDM15-212ENST00000486812 NUTM2FA1L443 756 aa11.45□□□□□ -0.58
PRDM15-212ENST00000486812 MRPS35P82673 323 aaKnown RBP11.45□□□□□ -0.58
PRDM15-212ENST00000486812 OCA2Q04671 838 aa11.45□□□□□ -0.58
PRDM15-212ENST00000486812 NUTM2GQ5VZR2 741 aa11.45□□□□□ -0.58
PRDM15-212ENST00000486812 SUGP1Q8IWZ8 645 aaKnown RBP11.45□□□□□ -0.58
PRDM15-212ENST00000486812 DYDC2Q96IM9 177 aa11.45□□□□□ -0.58
PRDM15-212ENST00000486812 TXNDC16Q9P2K2 825 aa11.45□□□□□ -0.58
PRDM15-212ENST00000486812 NRBP1Q9UHY1 535 aa11.45□□□□□ -0.58
PRDM15-212ENST00000486812 LONP1P36776 959 aaKnown RBP11.44□□□□□ -0.58
PRDM15-212ENST00000486812 ARID5AQ03989 594 aa11.44□□□□□ -0.58
PRDM15-212ENST00000486812 SCYL3Q8IZE3 742 aa11.44□□□□□ -0.58
PRDM15-212ENST00000486812 TRIML2Q8N7C3 387 aa11.44□□□□□ -0.58
PRDM15-212ENST00000486812 SLC26A6Q9BXS9 759 aa11.44□□□□□ -0.58
PRDM15-212ENST00000486812 TRIM31Q9BZY9 425 aa11.44□□□□□ -0.58
PRDM15-212ENST00000486812 SH2D4AQ9H788 454 aa11.44□□□□□ -0.58
PRDM15-212ENST00000486812 SEC63Q9UGP8 760 aaKnown RBP11.44□□□□□ -0.58
PRDM15-212ENST00000486812 IFIT3O14879 490 aaKnown RBP11.44□□□□□ -0.58
PRDM15-212ENST00000486812 CTNND1O60716 968 aaKnown RBP11.44□□□□□ -0.58
PRDM15-212ENST00000486812 S100BP04271 92 aaPredicted RBP11.44□□□□□ -0.58
PRDM15-212ENST00000486812 BLVRAP53004 296 aa11.44□□□□□ -0.58
PRDM15-212ENST00000486812 CCDC13Q8IYE1 715 aa11.44□□□□□ -0.58
PRDM15-212ENST00000486812 ADKP55263 362 aaKnown RBP11.44□□□□□ -0.58
PRDM15-212ENST00000486812 CYLC2Q14093 348 aaPredicted RBP11.44□□□□□ -0.58
PRDM15-212ENST00000486812 WDR75Q8IWA0 830 aaKnown RBP11.44□□□□□ -0.58
PRDM15-212ENST00000486812 THOC1Q96FV9 657 aaKnown RBP11.44□□□□□ -0.58
PRDM15-212ENST00000486812 HARSP12081 509 aaKnown RBP11.44□□□□□ -0.58
PRDM15-212ENST00000486812 SNX1Q13596 522 aa11.44□□□□□ -0.58
PRDM15-212ENST00000486812 AFAP1L2Q8N4X5 818 aa11.44□□□□□ -0.58
PRDM15-212ENST00000486812 ANKRD44Q8N8A2 993 aa11.44□□□□□ -0.58
PRDM15-212ENST00000486812 HELBQ8NG08 1087 aaPredicted RBP11.44□□□□□ -0.58
PRDM15-212ENST00000486812 FERMT2Q96AC1 680 aa11.44□□□□□ -0.58
PRDM15-212ENST00000486812 HAUS8Q9BT25 410 aa11.44□□□□□ -0.58
PRDM15-212ENST00000486812 RNF41Q9H4P4 317 aaPredicted RBP11.44□□□□□ -0.58
PRDM15-212ENST00000486812 ANKRD50Q9ULJ7 1429 aa11.44□□□□□ -0.58
PRDM15-212ENST00000486812 MAGEA1P43355 309 aa11.44□□□□□ -0.58
PRDM15-212ENST00000486812 TBC1D8BQ0IIM8 1120 aa11.44□□□□□ -0.58
PRDM15-212ENST00000486812 SLC9C1Q4G0N8 1177 aa11.44□□□□□ -0.58
PRDM15-212ENST00000486812 LRRC8CQ8TDW0 803 aa11.44□□□□□ -0.58
PRDM15-212ENST00000486812 VPS16Q9H269 839 aa11.44□□□□□ -0.58
PRDM15-212ENST00000486812 LRRIQ3A6PVS8 624 aaPredicted RBP11.43□□□□□ -0.58
PRDM15-212ENST00000486812 CAND2O75155 1236 aa11.43□□□□□ -0.58
PRDM15-212ENST00000486812 ERCC5P28715 1186 aaPredicted RBP11.43□□□□□ -0.58
PRDM15-212ENST00000486812 RNASE9P60153 205 aaKnown RBP11.43□□□□□ -0.58
PRDM15-212ENST00000486812 C6orf118Q5T5N4 469 aa11.43□□□□□ -0.58
PRDM15-212ENST00000486812 LGSNQ5TDP6 509 aa11.43□□□□□ -0.58
PRDM15-212ENST00000486812 PLEKHM2Q8IWE5 1019 aa11.43□□□□□ -0.58
PRDM15-212ENST00000486812 UAP1Q16222 522 aaPredicted RBP11.43□□□□□ -0.58
PRDM15-212ENST00000486812 ARHGAP22Q7Z5H3 698 aa11.43□□□□□ -0.58
PRDM15-212ENST00000486812 ZNF280CQ8ND82 737 aa11.43□□□□□ -0.58
PRDM15-212ENST00000486812 DESI2Q9BSY9 194 aa11.43□□□□□ -0.58
PRDM15-212ENST00000486812 MRPL46Q9H2W6 279 aaKnown RBP11.43□□□□□ -0.58
PRDM15-212ENST00000486812 KLF18A0A0U1RQI7 1052 aa11.43□□□□□ -0.58
PRDM15-212ENST00000486812 BASP1P80723 227 aaKnown RBP11.43□□□□□ -0.58
PRDM15-212ENST00000486812 KLC1Q07866 573 aa11.43□□□□□ -0.58
PRDM15-212ENST00000486812 INAQ16352 499 aa11.43□□□□□ -0.58
PRDM15-212ENST00000486812 LONRF3Q496Y0 759 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms