RNA–Protein interactions for RNA: ENST00000485743.1

HBB-204, Transcript of hemoglobin subunit beta, humanhuman

TSL 1 (best)

Gene HBB, Length 680 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HBB-204ENST00000485743 USP40Q9NVE5 1235 aa16.8■□□□□ 0.28
HBB-204ENST00000485743 THEGQ9P2T0 379 aa16.8■□□□□ 0.28
HBB-204ENST00000485743 PPM1EQ8WY54 764 aa16.79■□□□□ 0.28
HBB-204ENST00000485743 ADAMTS8Q9UP79 889 aa16.79■□□□□ 0.28
HBB-204ENST00000485743 ATP11BQ9Y2G3 1177 aa16.79■□□□□ 0.28
HBB-204ENST00000485743 MYO9BQ13459 2157 aa16.79■□□□□ 0.28
HBB-204ENST00000485743 TCF20Q9UGU0 1960 aaKnown RBP16.78■□□□□ 0.28
HBB-204ENST00000485743 MUC6Q6W4X9 2439 aa16.78■□□□□ 0.28
HBB-204ENST00000485743 MROH5Q6ZUA9 1318 aa16.78■□□□□ 0.28
HBB-204ENST00000485743 PEX10O60683 326 aa16.78■□□□□ 0.28
HBB-204ENST00000485743 RGS3P49796 1198 aa16.78■□□□□ 0.28
HBB-204ENST00000485743 MRPS5P82675 430 aaKnown RBP16.78■□□□□ 0.28
HBB-204ENST00000485743 PABPC4Q13310 644 aaKnown RBP eCLIP16.78■□□□□ 0.28
HBB-204ENST00000485743 FKBP5Q13451 457 aaPredicted RBP16.78■□□□□ 0.28
HBB-204ENST00000485743 PRDM5Q9NQX1 630 aaPredicted RBP16.78■□□□□ 0.28
HBB-204ENST00000485743 CACNA1FO60840 1977 aa16.77■□□□□ 0.28
HBB-204ENST00000485743 HMGCS2P54868 508 aa16.77■□□□□ 0.28
HBB-204ENST00000485743 SPP2Q13103 211 aa16.77■□□□□ 0.28
HBB-204ENST00000485743 PDE3AQ14432 1141 aa16.77■□□□□ 0.28
HBB-204ENST00000485743 HCN4Q9Y3Q4 1203 aa16.77■□□□□ 0.28
HBB-204ENST00000485743 CHD9Q3L8U1 2897 aa16.77■□□□□ 0.27
HBB-204ENST00000485743 ATAD5Q96QE3 1844 aa16.77■□□□□ 0.27
HBB-204ENST00000485743 XIRP2A4UGR9 3374 aa16.77■□□□□ 0.27
HBB-204ENST00000485743 DNM1LO00429 736 aa16.76■□□□□ 0.27
HBB-204ENST00000485743 ENTPD3O75355 529 aa16.76■□□□□ 0.27
HBB-204ENST00000485743 DNAJB2P25686 324 aa16.76■□□□□ 0.27
HBB-204ENST00000485743 WDR43Q15061 677 aaKnown RBP eCLIP16.76■□□□□ 0.27
HBB-204ENST00000485743 POTEEQ6S8J3 1075 aa16.76■□□□□ 0.27
HBB-204ENST00000485743 RNPC3Q96LT9 517 aaKnown RBP16.76■□□□□ 0.27
HBB-204ENST00000485743 IDI2Q9BXS1 227 aa16.76■□□□□ 0.27
HBB-204ENST00000485743 ZNF576Q9H609 170 aa16.76■□□□□ 0.27
HBB-204ENST00000485743 TXNRD2Q9NNW7 524 aa16.76■□□□□ 0.27
HBB-204ENST00000485743 REV3LO60673 3130 aa16.75■□□□□ 0.27
HBB-204ENST00000485743 TRIM43BA6NCK2 446 aa16.75■□□□□ 0.27
HBB-204ENST00000485743 DDTLA6NHG4 134 aaPredicted RBP16.75■□□□□ 0.27
HBB-204ENST00000485743 RGS2P41220 211 aa16.75■□□□□ 0.27
HBB-204ENST00000485743 BEND3Q5T5X7 828 aa16.75■□□□□ 0.27
HBB-204ENST00000485743 SH3RF1Q7Z6J0 888 aa16.75■□□□□ 0.27
HBB-204ENST00000485743 ZSCAN29Q8IWY8 852 aaPredicted RBP16.75■□□□□ 0.27
HBB-204ENST00000485743 VGLL2Q8N8G2 317 aa16.75■□□□□ 0.27
HBB-204ENST00000485743 ZNF280CQ8ND82 737 aa16.75■□□□□ 0.27
HBB-204ENST00000485743 WDR66Q8TBY9 1149 aa16.75■□□□□ 0.27
HBB-204ENST00000485743 LPAR1Q92633 364 aa16.75■□□□□ 0.27
HBB-204ENST00000485743 TRIM43Q96BQ3 446 aaPredicted RBP16.75■□□□□ 0.27
HBB-204ENST00000485743 LRFN3Q9BTN0 628 aa16.75■□□□□ 0.27
HBB-204ENST00000485743 PDLIM7Q9NR12 457 aa16.75■□□□□ 0.27
HBB-204ENST00000485743 RFX7Q2KHR2 1363 aa16.75■□□□□ 0.27
HBB-204ENST00000485743 MYH2Q9UKX2 1941 aa16.74■□□□□ 0.27
HBB-204ENST00000485743 PDE8BO95263 885 aa16.74■□□□□ 0.27
HBB-204ENST00000485743 PRDX5P30044 214 aa16.74■□□□□ 0.27
HBB-204ENST00000485743 MAPK4P31152 587 aa16.74■□□□□ 0.27
HBB-204ENST00000485743 EPHB4P54760 987 aa16.74■□□□□ 0.27
HBB-204ENST00000485743 MORN1Q5T089 497 aa16.74■□□□□ 0.27
HBB-204ENST00000485743 AKNAD1Q5T1N1 836 aa16.74■□□□□ 0.27
HBB-204ENST00000485743 SLC39A5Q6ZMH5 540 aa16.74■□□□□ 0.27
HBB-204ENST00000485743 GPRC5AQ8NFJ5 357 aa16.74■□□□□ 0.27
HBB-204ENST00000485743 TSR2Q969E8 191 aaKnown RBP16.74■□□□□ 0.27
HBB-204ENST00000485743 SNX27Q96L92 541 aa16.74■□□□□ 0.27
HBB-204ENST00000485743 NECAB3Q96P71 396 aaPredicted RBP16.74■□□□□ 0.27
HBB-204ENST00000485743 APBA2Q99767 749 aa16.74■□□□□ 0.27
HBB-204ENST00000485743 DDX20Q9UHI6 824 aaKnown RBP16.74■□□□□ 0.27
HBB-204ENST00000485743 GRM8O00222 908 aa16.73■□□□□ 0.27
HBB-204ENST00000485743 RALBP1Q15311 655 aa16.73■□□□□ 0.27
HBB-204ENST00000485743 TWISTNBQ3B726 338 aaPredicted RBP16.73■□□□□ 0.27
HBB-204ENST00000485743 TRIM60Q495X7 471 aa16.73■□□□□ 0.27
HBB-204ENST00000485743 LRRC24Q50LG9 513 aa16.73■□□□□ 0.27
HBB-204ENST00000485743 METTL24Q5JXM2 366 aa16.73■□□□□ 0.27
HBB-204ENST00000485743 IL27Q8NEV9 243 aa16.73■□□□□ 0.27
HBB-204ENST00000485743 P2RX7Q99572 595 aaKnown RBP16.73■□□□□ 0.27
HBB-204ENST00000485743 KIF16BQ96L93 1317 aa16.72■□□□□ 0.27
HBB-204ENST00000485743 APAF1O14727 1248 aa16.72■□□□□ 0.27
HBB-204ENST00000485743 SNX17Q15036 470 aa16.72■□□□□ 0.27
HBB-204ENST00000485743 SH3D19Q5HYK7 790 aa16.72■□□□□ 0.27
HBB-204ENST00000485743 GJC2Q5T442 439 aaPredicted RBP16.72■□□□□ 0.27
HBB-204ENST00000485743 GPR142Q7Z601 462 aa16.72■□□□□ 0.27
HBB-204ENST00000485743 GAS2L1Q99501 681 aaPredicted RBP16.72■□□□□ 0.27
HBB-204ENST00000485743 PORCNQ9H237 461 aa16.72■□□□□ 0.27
HBB-204ENST00000485743 FLRT1Q9NZU1 646 aa16.72■□□□□ 0.27
HBB-204ENST00000485743 RBPJLQ9UBG7 517 aa16.72■□□□□ 0.27
HBB-204ENST00000485743 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.71■□□□□ 0.27
HBB-204ENST00000485743 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.71■□□□□ 0.27
HBB-204ENST00000485743 F6X3S4 739 aa16.71■□□□□ 0.27
HBB-204ENST00000485743 MSCO60682 206 aa16.71■□□□□ 0.27
HBB-204ENST00000485743 ITGB8P26012 769 aa16.71■□□□□ 0.27
HBB-204ENST00000485743 HERVK_113P62684 666 aa16.71■□□□□ 0.27
HBB-204ENST00000485743 IRX3P78415 501 aaPredicted RBP16.71■□□□□ 0.27
HBB-204ENST00000485743 Q3C1V9 767 aa16.71■□□□□ 0.27
HBB-204ENST00000485743 PPP4R3CPQ6ZMV5 832 aa16.71■□□□□ 0.27
HBB-204ENST00000485743 ALYREFQ86V81 257 aaKnown RBP16.71■□□□□ 0.27
HBB-204ENST00000485743 TIFAQ96CG3 184 aa16.71■□□□□ 0.27
HBB-204ENST00000485743 KAZALD1Q96I82 304 aa16.71■□□□□ 0.27
HBB-204ENST00000485743 DDX4Q9NQI0 724 aaKnown RBP16.71■□□□□ 0.27
HBB-204ENST00000485743 PLXNA1Q9UIW2 1896 aa16.71■□□□□ 0.27
HBB-204ENST00000485743 FAM196BA6NMK8 535 aa16.7■□□□□ 0.26
HBB-204ENST00000485743 LDHBP07195 334 aaKnown RBP16.7■□□□□ 0.26
HBB-204ENST00000485743 FGFR2P21802 821 aa16.7■□□□□ 0.26
HBB-204ENST00000485743 CNGA1P29973 690 aa16.7■□□□□ 0.26
HBB-204ENST00000485743 MAP2K5Q13163 448 aa16.7■□□□□ 0.26
HBB-204ENST00000485743 CCDC85BQ15834 202 aaPredicted RBP16.7■□□□□ 0.26
HBB-204ENST00000485743 MFSD14CQ5VZR4 134 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms