RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 IGSF3O75054 1194 aa21.4■■□□□ 1.02
MRPL28-209ENST00000481453 LDHBP07195 334 aaKnown RBP21.4■■□□□ 1.02
MRPL28-209ENST00000481453 BICD2Q8TD16 824 aa21.4■■□□□ 1.02
MRPL28-209ENST00000481453 RGPD3A6NKT7 1758 aaPredicted RBP21.4■■□□□ 1.02
MRPL28-209ENST00000481453 RGPD4Q7Z3J3 1758 aa21.4■■□□□ 1.02
MRPL28-209ENST00000481453 MYH2Q9UKX2 1941 aa21.39■■□□□ 1.02
MRPL28-209ENST00000481453 COL11A2P13942 1736 aaPredicted RBP21.39■■□□□ 1.02
MRPL28-209ENST00000481453 CCDC69A6NI79 296 aa21.39■■□□□ 1.01
MRPL28-209ENST00000481453 RANBP6O60518 1105 aaKnown RBP21.39■■□□□ 1.01
MRPL28-209ENST00000481453 IL1R1P14778 569 aa21.39■■□□□ 1.01
MRPL28-209ENST00000481453 WTAPQ15007 396 aa21.39■■□□□ 1.01
MRPL28-209ENST00000481453 SEC23AQ15436 765 aa21.39■■□□□ 1.01
MRPL28-209ENST00000481453 TBC1D16Q8TBP0 767 aa21.39■■□□□ 1.01
MRPL28-209ENST00000481453 FTOQ9C0B1 505 aaKnown RBP eCLIP21.39■■□□□ 1.01
MRPL28-209ENST00000481453 ESR2Q92731 530 aa21.39■■□□□ 1.01
MRPL28-209ENST00000481453 AIFM3Q96NN9 605 aa21.39■■□□□ 1.01
MRPL28-209ENST00000481453 CLSTN2Q9H4D0 955 aa21.39■■□□□ 1.01
MRPL28-209ENST00000481453 ATP8A2Q9NTI2 1148 aa21.39■■□□□ 1.01
MRPL28-209ENST00000481453 FAM13BQ9NYF5 915 aa21.39■■□□□ 1.01
MRPL28-209ENST00000481453 CDKL5O76039 1030 aa21.38■■□□□ 1.01
MRPL28-209ENST00000481453 SART3Q15020 963 aaKnown RBP21.38■■□□□ 1.01
MRPL28-209ENST00000481453 RGS22Q8NE09 1264 aa21.38■■□□□ 1.01
MRPL28-209ENST00000481453 PHKBQ93100 1093 aa21.38■■□□□ 1.01
MRPL28-209ENST00000481453 CFAP45Q9UL16 551 aa21.38■■□□□ 1.01
MRPL28-209ENST00000481453 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.38■■□□□ 1.01
MRPL28-209ENST00000481453 DLEC1Q9Y238 1755 aa21.38■■□□□ 1.01
MRPL28-209ENST00000481453 DYNC1I1O14576 645 aa21.37■■□□□ 1.01
MRPL28-209ENST00000481453 PPEF1O14829 653 aaPredicted RBP21.37■■□□□ 1.01
MRPL28-209ENST00000481453 TPM3P06753 285 aa21.37■■□□□ 1.01
MRPL28-209ENST00000481453 C17orf53Q8N3J3 647 aaPredicted RBP21.37■■□□□ 1.01
MRPL28-209ENST00000481453 SPC24Q8NBT2 197 aa21.37■■□□□ 1.01
MRPL28-209ENST00000481453 USP28Q96RU2 1077 aa21.37■■□□□ 1.01
MRPL28-209ENST00000481453 GOLGA6L6A8MZA4 724 aa21.37■■□□□ 1.01
MRPL28-209ENST00000481453 NR1I2O75469 434 aa21.37■■□□□ 1.01
MRPL28-209ENST00000481453 DIXDC1Q155Q3 683 aa21.37■■□□□ 1.01
MRPL28-209ENST00000481453 LUZP1Q86V48 1076 aa21.37■■□□□ 1.01
MRPL28-209ENST00000481453 SP8Q8IXZ3 490 aa21.37■■□□□ 1.01
MRPL28-209ENST00000481453 RCOR1Q9UKL0 485 aa21.37■■□□□ 1.01
MRPL28-209ENST00000481453 SRGNP10124 158 aa21.36■■□□□ 1.01
MRPL28-209ENST00000481453 CYP2D6P10635 497 aa21.36■■□□□ 1.01
MRPL28-209ENST00000481453 PCP11498 1178 aaKnown RBP21.36■■□□□ 1.01
MRPL28-209ENST00000481453 ANO6Q4KMQ2 910 aa21.36■■□□□ 1.01
MRPL28-209ENST00000481453 SBK1Q52WX2 424 aa21.36■■□□□ 1.01
MRPL28-209ENST00000481453 ATL3Q6DD88 541 aa21.36■■□□□ 1.01
MRPL28-209ENST00000481453 TMC4Q7Z404 712 aa21.36■■□□□ 1.01
MRPL28-209ENST00000481453 MKRN1Q9UHC7 482 aaKnown RBP21.36■■□□□ 1.01
MRPL28-209ENST00000481453 TNKSO95271 1327 aa21.36■■□□□ 1.01
MRPL28-209ENST00000481453 PRDM1O75626 825 aa21.36■■□□□ 1.01
MRPL28-209ENST00000481453 RBM43Q6ZSC3 357 aaKnown RBP21.36■■□□□ 1.01
MRPL28-209ENST00000481453 FLAD1Q8NFF5 587 aa21.36■■□□□ 1.01
MRPL28-209ENST00000481453 UBAC1Q9BSL1 405 aa21.36■■□□□ 1.01
MRPL28-209ENST00000481453 ALG1Q9BT22 464 aa21.36■■□□□ 1.01
MRPL28-209ENST00000481453 RGS17Q9UGC6 210 aaPredicted RBP21.36■■□□□ 1.01
MRPL28-209ENST00000481453 STK36Q9NRP7 1315 aa21.36■■□□□ 1.01
MRPL28-209ENST00000481453 ERICH2A1L162 156 aa21.35■■□□□ 1.01
MRPL28-209ENST00000481453 KIF28PB7ZC32 967 aa21.35■■□□□ 1.01
MRPL28-209ENST00000481453 MMP10P09238 476 aa21.35■■□□□ 1.01
MRPL28-209ENST00000481453 RCAN1P53805 252 aa21.35■■□□□ 1.01
MRPL28-209ENST00000481453 CEBPZQ03701 1054 aaKnown RBP21.35■■□□□ 1.01
MRPL28-209ENST00000481453 CPLX2Q6PUV4 134 aaKnown RBP21.35■■□□□ 1.01
MRPL28-209ENST00000481453 ZNF654Q8IZM8 581 aa21.35■■□□□ 1.01
MRPL28-209ENST00000481453 TMTC2Q8N394 836 aa21.35■■□□□ 1.01
MRPL28-209ENST00000481453 SPTLC3Q9NUV7 552 aa21.35■■□□□ 1.01
MRPL28-209ENST00000481453 ATP6V0A2Q9Y487 856 aa21.35■■□□□ 1.01
MRPL28-209ENST00000481453 UBE2Q2LH0YL09 131 aa21.35■■□□□ 1.01
MRPL28-209ENST00000481453 KIF23Q02241 960 aaPredicted RBP21.35■■□□□ 1.01
MRPL28-209ENST00000481453 ENAHQ8N8S7 591 aaPredicted RBP21.35■■□□□ 1.01
MRPL28-209ENST00000481453 SH3RF3Q8TEJ3 882 aaPredicted RBP21.35■■□□□ 1.01
MRPL28-209ENST00000481453 ZNF396Q96N95 335 aaPredicted RBP21.35■■□□□ 1.01
MRPL28-209ENST00000481453 CBX8Q9HC52 389 aa21.35■■□□□ 1.01
MRPL28-209ENST00000481453 ARPP21Q9UBL0 812 aaPredicted RBP21.35■■□□□ 1.01
MRPL28-209ENST00000481453 ORC4O43929 436 aa21.34■■□□□ 1.01
MRPL28-209ENST00000481453 IFNAR1P17181 557 aa21.34■■□□□ 1.01
MRPL28-209ENST00000481453 IARSP41252 1262 aaKnown RBP21.34■■□□□ 1.01
MRPL28-209ENST00000481453 PPP4CP60510 307 aa21.34■■□□□ 1.01
MRPL28-209ENST00000481453 SYNE3Q6ZMZ3 975 aa21.34■■□□□ 1.01
MRPL28-209ENST00000481453 ZSCAN10Q96SZ4 725 aaPredicted RBP21.34■■□□□ 1.01
MRPL28-209ENST00000481453 MROH7-TTC4A0A0A0MT08 1334 aa21.33■■□□□ 1.01
MRPL28-209ENST00000481453 FMNL1O95466 1100 aaPredicted RBP21.33■■□□□ 1.01
MRPL28-209ENST00000481453 GSTO1P78417 241 aa21.33■■□□□ 1.01
MRPL28-209ENST00000481453 RTN1Q16799 776 aa21.33■■□□□ 1.01
MRPL28-209ENST00000481453 RTFDC1Q9BY42 306 aaPredicted RBP21.33■■□□□ 1.01
MRPL28-209ENST00000481453 KCNF1Q9H3M0 494 aa21.33■■□□□ 1.01
MRPL28-209ENST00000481453 NPR1P16066 1061 aa21.33■■□□□ 1
MRPL28-209ENST00000481453 CDK5RAP2Q96SN8 1893 aa21.33■■□□□ 1
MRPL28-209ENST00000481453 C6orf229H3BNL8 230 aa21.32■■□□□ 1
MRPL28-209ENST00000481453 USP17L8P0C7I0 530 aa21.32■■□□□ 1
MRPL28-209ENST00000481453 KRT40Q6A162 431 aa21.32■■□□□ 1
MRPL28-209ENST00000481453 OLFM4Q6UX06 510 aa21.32■■□□□ 1
MRPL28-209ENST00000481453 BRAPQ7Z569 592 aa21.32■■□□□ 1
MRPL28-209ENST00000481453 NBPF11Q86T75 865 aa21.32■■□□□ 1
MRPL28-209ENST00000481453 PRIMPOLQ96LW4 560 aa21.32■■□□□ 1
MRPL28-209ENST00000481453 NAV1Q8NEY1 1877 aa21.32■■□□□ 1
MRPL28-209ENST00000481453 MSL1Q68DK7 614 aa21.32■■□□□ 1
MRPL28-209ENST00000481453 FANCBQ8NB91 859 aa21.32■■□□□ 1
MRPL28-209ENST00000481453 MYRIPQ8NFW9 859 aa21.32■■□□□ 1
MRPL28-209ENST00000481453 KIAA1524Q8TCG1 905 aa21.32■■□□□ 1
MRPL28-209ENST00000481453 MAP7D2Q96T17 732 aa21.32■■□□□ 1
MRPL28-209ENST00000481453 SLC26A6Q9BXS9 759 aa21.32■■□□□ 1
MRPL28-209ENST00000481453 RTEL1Q9NZ71 1219 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms