RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 CTR9Q6PD62 1173 aa13.25□□□□□ -0.29
HPS1-208ENST00000467246 TMTC2Q8N394 836 aa13.25□□□□□ -0.29
HPS1-208ENST00000467246 FANCBQ8NB91 859 aa13.25□□□□□ -0.29
HPS1-208ENST00000467246 PODXL2Q9NZ53 605 aa13.25□□□□□ -0.29
HPS1-208ENST00000467246 STK36Q9NRP7 1315 aa13.25□□□□□ -0.29
HPS1-208ENST00000467246 OFD1O75665 1012 aa13.25□□□□□ -0.29
HPS1-208ENST00000467246 U2AF2P26368 475 aaKnown RBP eCLIP13.25□□□□□ -0.29
HPS1-208ENST00000467246 SLC39A14Q15043 492 aa13.25□□□□□ -0.29
HPS1-208ENST00000467246 NBPF11Q86T75 865 aa13.25□□□□□ -0.29
HPS1-208ENST00000467246 SDF4Q9BRK5 362 aa13.25□□□□□ -0.29
HPS1-208ENST00000467246 MTA3Q9BTC8 594 aa13.25□□□□□ -0.29
HPS1-208ENST00000467246 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.25□□□□□ -0.29
HPS1-208ENST00000467246 NID2Q14112 1375 aa13.25□□□□□ -0.29
HPS1-208ENST00000467246 CRACR2BQ8N4Y2 399 aaPredicted RBP13.24□□□□□ -0.29
HPS1-208ENST00000467246 ENAHQ8N8S7 591 aaPredicted RBP13.24□□□□□ -0.29
HPS1-208ENST00000467246 TDRD7Q8NHU6 1098 aaKnown RBP13.24□□□□□ -0.29
HPS1-208ENST00000467246 ANKIB1Q9P2G1 1089 aa13.24□□□□□ -0.29
HPS1-208ENST00000467246 KCNJ14Q9UNX9 436 aa13.24□□□□□ -0.29
HPS1-208ENST00000467246 IRS2Q9Y4H2 1338 aa13.24□□□□□ -0.29
HPS1-208ENST00000467246 BAZ2AQ9UIF9 1905 aaKnown RBP13.24□□□□□ -0.29
HPS1-208ENST00000467246 TAF1LQ8IZX4 1826 aa13.24□□□□□ -0.29
HPS1-208ENST00000467246 TNRC6CQ9HCJ0 1690 aaKnown RBP13.24□□□□□ -0.29
HPS1-208ENST00000467246 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.24□□□□□ -0.29
HPS1-208ENST00000467246 ONECUT3O60422 494 aaPredicted RBP13.24□□□□□ -0.29
HPS1-208ENST00000467246 CNBD1Q8NA66 436 aa13.24□□□□□ -0.29
HPS1-208ENST00000467246 PDS5AQ29RF7 1337 aaKnown RBP13.23□□□□□ -0.29
HPS1-208ENST00000467246 BTBD18B2RXH4 712 aa13.23□□□□□ -0.29
HPS1-208ENST00000467246 IQCB1Q15051 598 aa13.23□□□□□ -0.29
HPS1-208ENST00000467246 PTPAQ15257 358 aa13.23□□□□□ -0.29
HPS1-208ENST00000467246 STX1AQ16623 288 aa13.23□□□□□ -0.29
HPS1-208ENST00000467246 TRIM22Q8IYM9 498 aa13.23□□□□□ -0.29
HPS1-208ENST00000467246 FBXW7Q969H0 707 aa13.23□□□□□ -0.29
HPS1-208ENST00000467246 ZSCAN10Q96SZ4 725 aaPredicted RBP13.23□□□□□ -0.29
HPS1-208ENST00000467246 MAP3K14Q99558 947 aa13.23□□□□□ -0.29
HPS1-208ENST00000467246 PDCL3Q9H2J4 239 aa13.23□□□□□ -0.29
HPS1-208ENST00000467246 LY75O60449 1722 aa13.23□□□□□ -0.29
HPS1-208ENST00000467246 MROH7-TTC4A0A0A0MT08 1334 aa13.23□□□□□ -0.29
HPS1-208ENST00000467246 HSPA1LP34931 641 aa13.23□□□□□ -0.29
HPS1-208ENST00000467246 GPR101Q96P66 508 aaPredicted RBP13.23□□□□□ -0.29
HPS1-208ENST00000467246 DCP1AQ9NPI6 582 aaPredicted RBP13.23□□□□□ -0.29
HPS1-208ENST00000467246 ECM29Q5VYK3 1845 aa13.22□□□□□ -0.29
HPS1-208ENST00000467246 CCDC196A0A1B0GTZ2 297 aa13.22□□□□□ -0.29
HPS1-208ENST00000467246 ZNF202O95125 648 aa13.22□□□□□ -0.29
HPS1-208ENST00000467246 MMP1P03956 469 aa13.22□□□□□ -0.29
HPS1-208ENST00000467246 PFKFB1P16118 471 aa13.22□□□□□ -0.29
HPS1-208ENST00000467246 CMA1P23946 247 aa13.22□□□□□ -0.29
HPS1-208ENST00000467246 GRAPQ13588 217 aa13.22□□□□□ -0.29
HPS1-208ENST00000467246 GRAPLQ8TC17 118 aaPredicted RBP13.22□□□□□ -0.29
HPS1-208ENST00000467246 WASF1Q92558 559 aa13.22□□□□□ -0.29
HPS1-208ENST00000467246 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
HPS1-208ENST00000467246 FGRP09769 529 aa13.22□□□□□ -0.29
HPS1-208ENST00000467246 CYP2D6P10635 497 aa13.22□□□□□ -0.29
HPS1-208ENST00000467246 PRR5LQ6MZQ0 368 aa13.22□□□□□ -0.29
HPS1-208ENST00000467246 DIS3L2Q8IYB7 885 aaKnown RBP13.22□□□□□ -0.29
HPS1-208ENST00000467246 CRNKL1Q9BZJ0 848 aaKnown RBP13.22□□□□□ -0.29
HPS1-208ENST00000467246 TRIM5Q9C035 493 aa13.22□□□□□ -0.29
HPS1-208ENST00000467246 DEXIO95424 95 aa13.21□□□□□ -0.29
HPS1-208ENST00000467246 CAVIN2O95810 425 aa13.21□□□□□ -0.29
HPS1-208ENST00000467246 KIAA2012Q0VF49 1180 aa13.21□□□□□ -0.29
HPS1-208ENST00000467246 SLC4A8Q2Y0W8 1093 aa13.21□□□□□ -0.29
HPS1-208ENST00000467246 NOSTRINQ8IVI9 506 aa13.21□□□□□ -0.29
HPS1-208ENST00000467246 C17orf53Q8N3J3 647 aaPredicted RBP13.21□□□□□ -0.29
HPS1-208ENST00000467246 TSC1Q92574 1164 aa13.21□□□□□ -0.29
HPS1-208ENST00000467246 CLIC6Q96NY7 704 aa13.21□□□□□ -0.29
HPS1-208ENST00000467246 ZHX1Q9UKY1 873 aaPredicted RBP13.21□□□□□ -0.29
HPS1-208ENST00000467246 SBF2Q86WG5 1849 aa13.21□□□□□ -0.29
HPS1-208ENST00000467246 MYH2Q9UKX2 1941 aa13.21□□□□□ -0.29
HPS1-208ENST00000467246 NMT2O60551 498 aa13.21□□□□□ -0.29
HPS1-208ENST00000467246 RCAN1P53805 252 aa13.21□□□□□ -0.29
HPS1-208ENST00000467246 IFIT1BQ5T764 474 aaKnown RBP13.21□□□□□ -0.29
HPS1-208ENST00000467246 SHC4Q6S5L8 630 aa13.21□□□□□ -0.29
HPS1-208ENST00000467246 KCNF1Q9H3M0 494 aa13.21□□□□□ -0.29
HPS1-208ENST00000467246 ANO10Q9NW15 660 aa13.21□□□□□ -0.29
HPS1-208ENST00000467246 MYH13Q9UKX3 1938 aa13.21□□□□□ -0.3
HPS1-208ENST00000467246 hCG_1642624A0A1W2PR95 340 aa13.2□□□□□ -0.3
HPS1-208ENST00000467246 PPP6R2O75170 966 aa13.2□□□□□ -0.3
HPS1-208ENST00000467246 TOB1P50616 345 aaPredicted RBP13.2□□□□□ -0.3
HPS1-208ENST00000467246 ZNF75DP51815 510 aa13.2□□□□□ -0.3
HPS1-208ENST00000467246 NR5A1Q13285 461 aa13.2□□□□□ -0.3
HPS1-208ENST00000467246 GRIK5Q16478 980 aa13.2□□□□□ -0.3
HPS1-208ENST00000467246 FAM47AQ5JRC9 791 aa13.2□□□□□ -0.3
HPS1-208ENST00000467246 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.2□□□□□ -0.3
HPS1-208ENST00000467246 IQCA1Q86XH1 822 aa13.2□□□□□ -0.3
HPS1-208ENST00000467246 PLA2G4DQ86XP0 818 aa13.2□□□□□ -0.3
HPS1-208ENST00000467246 DZIP1Q86YF9 867 aaKnown RBP13.2□□□□□ -0.3
HPS1-208ENST00000467246 KIAA1468Q9P260 1216 aa13.2□□□□□ -0.3
HPS1-208ENST00000467246 TRPC5Q9UL62 973 aaPredicted RBP13.2□□□□□ -0.3
HPS1-208ENST00000467246 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.2□□□□□ -0.3
HPS1-208ENST00000467246 DUOX1Q9NRD9 1551 aa13.2□□□□□ -0.3
HPS1-208ENST00000467246 GYS1P13807 737 aa13.2□□□□□ -0.3
HPS1-208ENST00000467246 SAFBQ15424 915 aaKnown RBP eCLIP13.2□□□□□ -0.3
HPS1-208ENST00000467246 OXER1Q8TDS5 423 aa13.2□□□□□ -0.3
HPS1-208ENST00000467246 SHISA4Q96DD7 197 aa13.2□□□□□ -0.3
HPS1-208ENST00000467246 PRDM4Q9UKN5 801 aa13.2□□□□□ -0.3
HPS1-208ENST00000467246 GOLGA6L19H0YKK7 550 aa13.2□□□□□ -0.3
HPS1-208ENST00000467246 PLEKHA8P1O95397 391 aa13.2□□□□□ -0.3
HPS1-208ENST00000467246 TROAPQ12815 778 aa13.2□□□□□ -0.3
HPS1-208ENST00000467246 DHX40Q8IX18 779 aaKnown RBP13.2□□□□□ -0.3
HPS1-208ENST00000467246 ATP8A2Q9NTI2 1148 aa13.2□□□□□ -0.3
HPS1-208ENST00000467246 NRBP1Q9UHY1 535 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms