RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 PI16Q6UXB8 463 aa24.37■■□□□ 1.49
VARS-221ENST00000463184 CCDC84Q86UT8 332 aaPredicted RBP24.37■■□□□ 1.49
VARS-221ENST00000463184 ANKRD13CQ8N6S4 541 aa24.37■■□□□ 1.49
VARS-221ENST00000463184 COA7Q96BR5 231 aa24.37■■□□□ 1.49
VARS-221ENST00000463184 COL2A1P02458 1487 aaPredicted RBP24.37■■□□□ 1.49
VARS-221ENST00000463184 CEP290O15078 2479 aa24.36■■□□□ 1.49
VARS-221ENST00000463184 UQCRFS1P1P0C7P4 283 aa24.36■■□□□ 1.49
VARS-221ENST00000463184 TRIM27P14373 513 aa24.36■■□□□ 1.49
VARS-221ENST00000463184 FAM110CQ1W6H9 321 aa24.36■■□□□ 1.49
VARS-221ENST00000463184 TREML2Q5T2D2 321 aa24.36■■□□□ 1.49
VARS-221ENST00000463184 CHRDL2Q6WN34 429 aa24.36■■□□□ 1.49
VARS-221ENST00000463184 ZNF280CQ8ND82 737 aa24.36■■□□□ 1.49
VARS-221ENST00000463184 FAM196BA6NMK8 535 aa24.35■■□□□ 1.49
VARS-221ENST00000463184 FARP2O94887 1054 aaPredicted RBP24.35■■□□□ 1.49
VARS-221ENST00000463184 INHAP05111 366 aa24.35■■□□□ 1.49
VARS-221ENST00000463184 ELNP15502 786 aa24.35■■□□□ 1.49
VARS-221ENST00000463184 SPP2Q13103 211 aa24.35■■□□□ 1.49
VARS-221ENST00000463184 ATF7IPQ6VMQ6 1270 aa24.35■■□□□ 1.49
VARS-221ENST00000463184 LRP2BPQ9P2M1 347 aa24.35■■□□□ 1.49
VARS-221ENST00000463184 NR2E3Q9Y5X4 410 aa24.35■■□□□ 1.49
VARS-221ENST00000463184 CAP2P40123 477 aa24.34■■□□□ 1.49
VARS-221ENST00000463184 MCAMP43121 646 aa24.34■■□□□ 1.49
VARS-221ENST00000463184 PABPC4Q13310 644 aaKnown RBP eCLIP24.34■■□□□ 1.498e-7■■□□□ 12.7
VARS-221ENST00000463184 HERC5Q9UII4 1024 aaKnown RBP24.34■■□□□ 1.49
VARS-221ENST00000463184 PNMA6EA0A0J9YXQ4 647 aa24.33■■□□□ 1.49
VARS-221ENST00000463184 USP17L5A8MUK1 530 aa24.33■■□□□ 1.49
VARS-221ENST00000463184 GCLCP48506 637 aaPredicted RBP24.33■■□□□ 1.49
VARS-221ENST00000463184 TEX11Q8IYF3 940 aa24.33■■□□□ 1.49
VARS-221ENST00000463184 NOL10Q9BSC4 688 aaKnown RBP24.33■■□□□ 1.49
VARS-221ENST00000463184 TFRCP02786 760 aaKnown RBP24.32■■□□□ 1.48
VARS-221ENST00000463184 DHX36Q9H2U1 1008 aaKnown RBP24.32■■□□□ 1.48
VARS-221ENST00000463184 AS3MTQ9HBK9 375 aa24.32■■□□□ 1.48
VARS-221ENST00000463184 RBM27Q9P2N5 1060 aaKnown RBP24.32■■□□□ 1.48
VARS-221ENST00000463184 PI4KBQ9UBF8 816 aa24.32■■□□□ 1.48
VARS-221ENST00000463184 BAG3O95817 575 aa24.31■■□□□ 1.48
VARS-221ENST00000463184 HMGCS2P54868 508 aa24.31■■□□□ 1.48
VARS-221ENST00000463184 SH3D19Q5HYK7 790 aa24.31■■□□□ 1.48
VARS-221ENST00000463184 FRAT1Q92837 279 aaPredicted RBP24.31■■□□□ 1.48
VARS-221ENST00000463184 DEFB118Q96PH6 123 aa24.31■■□□□ 1.48
VARS-221ENST00000463184 PAK6Q9NQU5 681 aaPredicted RBP24.31■■□□□ 1.48
VARS-221ENST00000463184 TAOK2Q9UL54 1235 aa24.31■■□□□ 1.48
VARS-221ENST00000463184 TRIOBPQ9H2D6 2365 aa24.3■■□□□ 1.48
VARS-221ENST00000463184 BCAR3O75815 825 aa24.3■■□□□ 1.48
VARS-221ENST00000463184 PLCG2P16885 1265 aa24.3■■□□□ 1.48
VARS-221ENST00000463184 RRP1BQ14684 758 aaKnown RBP24.3■■□□□ 1.48
VARS-221ENST00000463184 NAA16Q6N069 864 aaPredicted RBP24.3■■□□□ 1.48
VARS-221ENST00000463184 SH3RF3Q8TEJ3 882 aaPredicted RBP24.3■■□□□ 1.48
VARS-221ENST00000463184 GPR108Q9NPR9 543 aa24.3■■□□□ 1.48
VARS-221ENST00000463184 TNNQ9UQP3 1299 aa24.3■■□□□ 1.48
VARS-221ENST00000463184 DOCK3Q8IZD9 2030 aa24.29■■□□□ 1.48
VARS-221ENST00000463184 CCDC158Q5M9N0 1113 aa24.29■■□□□ 1.48
VARS-221ENST00000463184 CLUAP1Q96AJ1 413 aa24.29■■□□□ 1.48
VARS-221ENST00000463184 CRISPLD2Q9H0B8 497 aa24.29■■□□□ 1.48
VARS-221ENST00000463184 ASCC2Q9H1I8 757 aaPredicted RBP24.29■■□□□ 1.48
VARS-221ENST00000463184 AATFQ9NY61 560 aaKnown RBP eCLIP24.29■■□□□ 1.48
VARS-221ENST00000463184 ZBTB7BO15156 539 aaPredicted RBP24.28■■□□□ 1.48
VARS-221ENST00000463184 IGSF3O75054 1194 aa24.28■■□□□ 1.48
VARS-221ENST00000463184 PPP4CP60510 307 aa24.28■■□□□ 1.48
VARS-221ENST00000463184 TTC39AQ5SRH9 613 aa24.28■■□□□ 1.48
VARS-221ENST00000463184 WDR18Q9BV38 432 aa24.28■■□□□ 1.48
VARS-221ENST00000463184 EVI5O60447 810 aa24.27■■□□□ 1.48
VARS-221ENST00000463184 ASNSP08243 561 aa24.27■■□□□ 1.48
VARS-221ENST00000463184 POLA2Q14181 598 aa24.27■■□□□ 1.48
VARS-221ENST00000463184 TNNI3KQ59H18 835 aa24.27■■□□□ 1.48
VARS-221ENST00000463184 FOXP4Q8IVH2 680 aaPredicted RBP24.27■■□□□ 1.48
VARS-221ENST00000463184 PRO3102Q9H379 93 aa24.27■■□□□ 1.48
VARS-221ENST00000463184 SNRKQ9NRH2 765 aa24.27■■□□□ 1.48
VARS-221ENST00000463184 FPGT-TNNI3KV9GXZ4 949 aa24.27■■□□□ 1.48
VARS-221ENST00000463184 LOC285556D6RIA3 1793 aa24.26■■□□□ 1.47
VARS-221ENST00000463184 TGFBRAP1Q8WUH2 860 aa24.26■■□□□ 1.47
VARS-221ENST00000463184 GJD2Q9UKL4 321 aa24.26■■□□□ 1.47
VARS-221ENST00000463184 HMGCRP04035 888 aa24.25■■□□□ 1.47
VARS-221ENST00000463184 BACE1P56817 501 aa24.25■■□□□ 1.47
VARS-221ENST00000463184 METTL16Q86W50 562 aaKnown RBP24.25■■□□□ 1.47
VARS-221ENST00000463184 TMEM57Q8N5G2 664 aa24.25■■□□□ 1.47
VARS-221ENST00000463184 SSH3Q8TE77 659 aa24.25■■□□□ 1.47
VARS-221ENST00000463184 ZNF512BQ96KM6 892 aaPredicted RBP24.25■■□□□ 1.47
VARS-221ENST00000463184 DBNDD2Q9BQY9 259 aa24.25■■□□□ 1.47
VARS-221ENST00000463184 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.25■■□□□ 1.47
VARS-221ENST00000463184 GINM1Q9NU53 330 aa24.25■■□□□ 1.47
VARS-221ENST00000463184 TMOD4Q9NZQ9 345 aa24.25■■□□□ 1.47
VARS-221ENST00000463184 MORF4L1Q9UBU8 362 aa24.25■■□□□ 1.47
VARS-221ENST00000463184 ATAD5Q96QE3 1844 aa24.25■■□□□ 1.47
VARS-221ENST00000463184 C19orf81C9J6K1 198 aa24.24■■□□□ 1.47
VARS-221ENST00000463184 CYP2E1P05181 493 aaPredicted RBP24.24■■□□□ 1.47
VARS-221ENST00000463184 HOXA7P31268 230 aaPredicted RBP24.24■■□□□ 1.47
VARS-221ENST00000463184 IRX3P78415 501 aaPredicted RBP24.24■■□□□ 1.47
VARS-221ENST00000463184 ATP8B2P98198 1209 aa24.24■■□□□ 1.47
VARS-221ENST00000463184 HNRNPUQ00839 825 aaKnown RBP eCLIP24.24■■□□□ 1.47
VARS-221ENST00000463184 OS9Q13438 667 aaPredicted RBP24.24■■□□□ 1.47
VARS-221ENST00000463184 MTMR2Q13614 643 aa24.24■■□□□ 1.47
VARS-221ENST00000463184 ZKSCAN2Q63HK3 967 aa24.24■■□□□ 1.47
VARS-221ENST00000463184 RANBP2P49792 3224 aaKnown RBP24.23■■□□□ 1.47
VARS-221ENST00000463184 NECAB2Q7Z6G3 386 aa24.23■■□□□ 1.47
VARS-221ENST00000463184 MAPKAPK5Q8IW41 473 aa24.23■■□□□ 1.47
VARS-221ENST00000463184 CRACR2BQ8N4Y2 399 aaPredicted RBP24.23■■□□□ 1.47
VARS-221ENST00000463184 ANKLE1Q8NAG6 615 aa24.23■■□□□ 1.47
VARS-221ENST00000463184 PAWRQ96IZ0 340 aaKnown RBP24.23■■□□□ 1.47
VARS-221ENST00000463184 TRIM34Q9BYJ4 488 aa24.23■■□□□ 1.47
VARS-221ENST00000463184 FLT1P17948 1338 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms