RNA–Protein interactions for RNA: ENST00000448926.5

LMBR1-212, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 3,629 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-212ENST00000448926 NTRK3Q16288 839 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 RTN1Q16799 776 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 LRRFIP1Q32MZ4 808 aaKnown RBP4.85□□□□□ -1.63
LMBR1-212ENST00000448926 DPCR1Q3MIW9 517 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 CTR9Q6PD62 1173 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 SASS6Q6UVJ0 657 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 SYNE3Q6ZMZ3 975 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 CCDC73Q6ZRK6 1079 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 FILIP1Q7Z7B0 1213 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 ZNF654Q8IZM8 581 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 PROM2Q8N271 834 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 AOPEPQ8N6M6 819 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 NSUN4Q96CB9 384 aaKnown RBP4.85□□□□□ -1.63
LMBR1-212ENST00000448926 PDLIM2Q96JY6 352 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 PLIN2Q99541 437 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 KCNF1Q9H3M0 494 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 VAT1LQ9HCJ6 419 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 CABP5Q9NP86 173 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 PCDHB6Q9Y5E3 794 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 ZMYM6O95789 1325 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 RFX7Q2KHR2 1363 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 COL22A1Q8NFW1 1626 aaPredicted RBP4.85□□□□□ -1.63
LMBR1-212ENST00000448926 CASZ1Q86V15 1759 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 SPTLC2O15270 562 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 KINO60870 393 aaKnown RBP4.85□□□□□ -1.63
LMBR1-212ENST00000448926 CLCN1P35523 988 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 USP5P45974 858 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 PLCD1P51178 756 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 HMGN5P82970 282 aaKnown RBP4.85□□□□□ -1.63
LMBR1-212ENST00000448926 CCDC144BQ3MJ40 725 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 FNBP4Q8N3X1 1017 aaPredicted RBP4.85□□□□□ -1.63
LMBR1-212ENST00000448926 LINC00301Q8NCQ3 95 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 RPGRQ92834 1020 aaKnown RBP4.85□□□□□ -1.63
LMBR1-212ENST00000448926 NACAP1Q9BZK3 213 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 FBXO3Q9UK99 471 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 SERPINB2P05120 415 aa4.84□□□□□ -1.63
LMBR1-212ENST00000448926 GYS1P13807 737 aa4.84□□□□□ -1.63
LMBR1-212ENST00000448926 PFKFB1P16118 471 aa4.84□□□□□ -1.63
LMBR1-212ENST00000448926 TAL1P17542 331 aaPredicted RBP4.84□□□□□ -1.63
LMBR1-212ENST00000448926 ANO1Q5XXA6 986 aa4.84□□□□□ -1.63
LMBR1-212ENST00000448926 CCDC186Q7Z3E2 898 aa4.84□□□□□ -1.63
LMBR1-212ENST00000448926 DIS3L2Q8IYB7 885 aaKnown RBP4.84□□□□□ -1.63
LMBR1-212ENST00000448926 STAG2Q8N3U4 1231 aa4.84□□□□□ -1.63
LMBR1-212ENST00000448926 ZBTB9Q96C00 473 aa4.84□□□□□ -1.63
LMBR1-212ENST00000448926 ALDH8A1Q9H2A2 487 aaPredicted RBP4.84□□□□□ -1.63
LMBR1-212ENST00000448926 GNL3LQ9NVN8 582 aaKnown RBP4.84□□□□□ -1.63
LMBR1-212ENST00000448926 STX8Q9UNK0 236 aa4.84□□□□□ -1.63
LMBR1-212ENST00000448926 CHD4Q14839 1912 aa4.84□□□□□ -1.63
LMBR1-212ENST00000448926 CENPFP49454 3210 aa4.84□□□□□ -1.63
LMBR1-212ENST00000448926 TOB1P50616 345 aaPredicted RBP4.84□□□□□ -1.63
LMBR1-212ENST00000448926 SSRP1Q08945 709 aaKnown RBP4.84□□□□□ -1.63
LMBR1-212ENST00000448926 SF3B3Q15393 1217 aaKnown RBP4.84□□□□□ -1.63
LMBR1-212ENST00000448926 ZNF174Q15697 407 aa4.84□□□□□ -1.63
LMBR1-212ENST00000448926 IFIT1BQ5T764 474 aaKnown RBP4.84□□□□□ -1.63
LMBR1-212ENST00000448926 SAMD1Q6SPF0 538 aaPredicted RBP4.84□□□□□ -1.63
LMBR1-212ENST00000448926 HOMER1Q86YM7 354 aa4.84□□□□□ -1.63
LMBR1-212ENST00000448926 TRMT44Q8IYL2 757 aaKnown RBP4.84□□□□□ -1.63
LMBR1-212ENST00000448926 EEF2KMTQ96G04 330 aa4.84□□□□□ -1.63
LMBR1-212ENST00000448926 DCP1AQ9NPI6 582 aaPredicted RBP4.84□□□□□ -1.63
LMBR1-212ENST00000448926 POLLQ9UGP5 575 aa4.84□□□□□ -1.63
LMBR1-212ENST00000448926 CFAP45Q9UL16 551 aa4.84□□□□□ -1.63
LMBR1-212ENST00000448926 LAMB2P55268 1798 aa4.84□□□□□ -1.63
LMBR1-212ENST00000448926 ERICH2A1L162 156 aa4.84□□□□□ -1.64
LMBR1-212ENST00000448926 TSPY2A6NKD2 308 aa4.84□□□□□ -1.64
LMBR1-212ENST00000448926 PRR29P0C7W0 189 aa4.84□□□□□ -1.64
LMBR1-212ENST00000448926 ATP1A3P13637 1013 aa4.84□□□□□ -1.64
LMBR1-212ENST00000448926 LMOD1P29536 600 aaPredicted RBP4.84□□□□□ -1.64
LMBR1-212ENST00000448926 GTF2IP78347 998 aa4.84□□□□□ -1.64
LMBR1-212ENST00000448926 ATP2B2Q01814 1243 aa4.84□□□□□ -1.64
LMBR1-212ENST00000448926 CSPP1Q1MSJ5 1256 aa4.84□□□□□ -1.64
LMBR1-212ENST00000448926 SHC4Q6S5L8 630 aa4.84□□□□□ -1.64
LMBR1-212ENST00000448926 FBXO33Q7Z6M2 555 aa4.84□□□□□ -1.64
LMBR1-212ENST00000448926 CREBRFQ8IUR6 639 aa4.84□□□□□ -1.64
LMBR1-212ENST00000448926 GPIHBP1Q8IV16 184 aa4.84□□□□□ -1.64
LMBR1-212ENST00000448926 SMYD4Q8IYR2 804 aaPredicted RBP4.84□□□□□ -1.64
LMBR1-212ENST00000448926 MRPS27Q92552 414 aaKnown RBP4.84□□□□□ -1.64
LMBR1-212ENST00000448926 LLPHQ9BRT6 129 aaKnown RBP4.84□□□□□ -1.64
LMBR1-212ENST00000448926 TMX1Q9H3N1 280 aa4.84□□□□□ -1.64
LMBR1-212ENST00000448926 ZSCAN16Q9H4T2 348 aaPredicted RBP4.84□□□□□ -1.64
LMBR1-212ENST00000448926 RCOR1Q9UKL0 485 aa4.84□□□□□ -1.64
LMBR1-212ENST00000448926 PLEKHG2Q9H7P9 1386 aa4.83□□□□□ -1.64
LMBR1-212ENST00000448926 CNTNAP4Q9C0A0 1308 aa4.83□□□□□ -1.64
LMBR1-212ENST00000448926 ZNF202O95125 648 aa4.83□□□□□ -1.64
LMBR1-212ENST00000448926 AFMP43652 599 aa4.83□□□□□ -1.64
LMBR1-212ENST00000448926 TFAP4Q01664 338 aa4.83□□□□□ -1.64
LMBR1-212ENST00000448926 UBE4AQ14139 1066 aa4.83□□□□□ -1.64
LMBR1-212ENST00000448926 CLEC4GQ6UXB4 293 aa4.83□□□□□ -1.64
LMBR1-212ENST00000448926 FANCBQ8NB91 859 aa4.83□□□□□ -1.64
LMBR1-212ENST00000448926 FAM200AQ8TCP9 573 aa4.83□□□□□ -1.64
LMBR1-212ENST00000448926 ZNF622Q969S3 477 aaKnown RBP eCLIP4.83□□□□□ -1.646e-11■■□□□ 11.9
LMBR1-212ENST00000448926 ZNF396Q96N95 335 aaPredicted RBP4.83□□□□□ -1.64
LMBR1-212ENST00000448926 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.83□□□□□ -1.64
LMBR1-212ENST00000448926 DBNDD1Q9H9R9 158 aa4.83□□□□□ -1.64
LMBR1-212ENST00000448926 ZKSCAN5Q9Y2L8 839 aa4.83□□□□□ -1.64
LMBR1-212ENST00000448926 ECM29Q5VYK3 1845 aa4.83□□□□□ -1.64
LMBR1-212ENST00000448926 BECN2A8MW95 431 aa4.83□□□□□ -1.64
LMBR1-212ENST00000448926 APBA3O96018 575 aa4.83□□□□□ -1.64
LMBR1-212ENST00000448926 CHRNA5P30532 468 aa4.83□□□□□ -1.64
LMBR1-212ENST00000448926 TCP10Q12799 353 aa4.83□□□□□ -1.64
LMBR1-212ENST00000448926 TRIM29Q14134 588 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms