RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 PTPAQ15257 358 aa15.52■□□□□ 0.08
PCNX3-202ENST00000439247 MED15Q96RN5 788 aa15.52■□□□□ 0.08
PCNX3-202ENST00000439247 ANKZF1Q9H8Y5 726 aa15.52■□□□□ 0.08
PCNX3-202ENST00000439247 ATP8B1O43520 1251 aa15.52■□□□□ 0.08
PCNX3-202ENST00000439247 TXLNAP40222 546 aa15.52■□□□□ 0.08
PCNX3-202ENST00000439247 RABGGTAQ92696 567 aa15.52■□□□□ 0.08
PCNX3-202ENST00000439247 CCDC85AQ96PX6 553 aaPredicted RBP15.52■□□□□ 0.08
PCNX3-202ENST00000439247 TEX13AQ9BXU3 409 aaPredicted RBP15.52■□□□□ 0.08
PCNX3-202ENST00000439247 SEC31BQ9NQW1 1179 aa15.52■□□□□ 0.08
PCNX3-202ENST00000439247 RFX7Q2KHR2 1363 aa15.52■□□□□ 0.07
PCNX3-202ENST00000439247 RHOXF2BP0C7M4 288 aa15.52■□□□□ 0.07
PCNX3-202ENST00000439247 KRT40Q6A162 431 aa15.52■□□□□ 0.07
PCNX3-202ENST00000439247 LRP10Q7Z4F1 713 aa15.52■□□□□ 0.07
PCNX3-202ENST00000439247 MB21D2Q8IYB1 491 aaPredicted RBP15.52■□□□□ 0.07
PCNX3-202ENST00000439247 RHOXF2Q9BQY4 288 aa15.52■□□□□ 0.07
PCNX3-202ENST00000439247 PUS7LQ9H0K6 701 aaKnown RBP15.52■□□□□ 0.07
PCNX3-202ENST00000439247 A0A1B0GUL7 405 aa15.51■□□□□ 0.07
PCNX3-202ENST00000439247 TEX33O43247 280 aa15.51■□□□□ 0.07
PCNX3-202ENST00000439247 SKIDA1Q1XH10 827 aa15.51■□□□□ 0.07
PCNX3-202ENST00000439247 INCENPQ9NQS7 918 aa15.51■□□□□ 0.07
PCNX3-202ENST00000439247 ATG3Q9NT62 314 aa15.51■□□□□ 0.07
PCNX3-202ENST00000439247 RRP15Q9Y3B9 282 aaKnown RBP15.51■□□□□ 0.07
PCNX3-202ENST00000439247 COBLO75128 1261 aa15.51■□□□□ 0.07
PCNX3-202ENST00000439247 ADORA1P30542 326 aa15.51■□□□□ 0.07
PCNX3-202ENST00000439247 CHMP4BP1P59074 171 aa15.51■□□□□ 0.07
PCNX3-202ENST00000439247 SCARF1Q14162 830 aa15.51■□□□□ 0.07
PCNX3-202ENST00000439247 MAP3K14Q99558 947 aa15.51■□□□□ 0.07
PCNX3-202ENST00000439247 KCNH3Q9ULD8 1083 aa15.51■□□□□ 0.07
PCNX3-202ENST00000439247 KCNQ2O43526 872 aa15.5■□□□□ 0.07
PCNX3-202ENST00000439247 CASP7P55210 303 aa15.5■□□□□ 0.07
PCNX3-202ENST00000439247 FOXO4P98177 505 aa15.5■□□□□ 0.07
PCNX3-202ENST00000439247 SPECC1LQ69YQ0 1117 aa15.5■□□□□ 0.07
PCNX3-202ENST00000439247 RAD9BQ6WBX8 426 aa15.5■□□□□ 0.07
PCNX3-202ENST00000439247 SRLQ86TD4 932 aa15.5■□□□□ 0.07
PCNX3-202ENST00000439247 CDCA7Q9BWT1 371 aaPredicted RBP15.5■□□□□ 0.07
PCNX3-202ENST00000439247 FAN1Q9Y2M0 1017 aa15.5■□□□□ 0.07
PCNX3-202ENST00000439247 KCPQ6ZWJ8 1503 aa15.5■□□□□ 0.07
PCNX3-202ENST00000439247 ITGB4P16144 1822 aa15.5■□□□□ 0.07
PCNX3-202ENST00000439247 STX10O60499 249 aa15.5■□□□□ 0.07
PCNX3-202ENST00000439247 IMMTQ16891 758 aaKnown RBP15.5■□□□□ 0.07
PCNX3-202ENST00000439247 RESP18Q5W5W9 173 aa15.5■□□□□ 0.07
PCNX3-202ENST00000439247 PTF1AQ7RTS3 328 aa15.5■□□□□ 0.07
PCNX3-202ENST00000439247 FCHSD1Q86WN1 690 aa15.5■□□□□ 0.07
PCNX3-202ENST00000439247 MICU3Q86XE3 530 aa15.5■□□□□ 0.07
PCNX3-202ENST00000439247 AK7Q96M32 723 aa15.5■□□□□ 0.07
PCNX3-202ENST00000439247 ABCB6Q9NP58 842 aa15.5■□□□□ 0.07
PCNX3-202ENST00000439247 MAN1B1Q9UKM7 699 aa15.5■□□□□ 0.07
PCNX3-202ENST00000439247 MAP2K7O14733 419 aa15.5■□□□□ 0.07
PCNX3-202ENST00000439247 SNRPA1P09661 255 aaKnown RBP15.5■□□□□ 0.07
PCNX3-202ENST00000439247 CCDC102BQ68D86 513 aa15.5■□□□□ 0.07
PCNX3-202ENST00000439247 GOLGA5Q8TBA6 731 aa15.5■□□□□ 0.07
PCNX3-202ENST00000439247 CUTAO60888 179 aa15.49■□□□□ 0.07
PCNX3-202ENST00000439247 BEND6Q5SZJ8 279 aaPredicted RBP15.49■□□□□ 0.07
PCNX3-202ENST00000439247 EXOC4Q96A65 974 aa15.49■□□□□ 0.07
PCNX3-202ENST00000439247 GJD4Q96KN9 370 aaPredicted RBP15.49■□□□□ 0.07
PCNX3-202ENST00000439247 DOT1LQ8TEK3 1739 aa15.49■□□□□ 0.07
PCNX3-202ENST00000439247 DHX16O60231 1041 aaKnown RBP15.49■□□□□ 0.07
PCNX3-202ENST00000439247 ATP2B1P20020 1258 aa15.49■□□□□ 0.07
PCNX3-202ENST00000439247 CASP1P29466 404 aa15.49■□□□□ 0.07
PCNX3-202ENST00000439247 ACTN2P35609 894 aa15.49■□□□□ 0.07
PCNX3-202ENST00000439247 CYB5R4Q7L1T6 521 aa15.49■□□□□ 0.07
PCNX3-202ENST00000439247 RALYLQ86SE5 291 aaKnown RBP15.49■□□□□ 0.07
PCNX3-202ENST00000439247 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.49■□□□□ 0.07
PCNX3-202ENST00000439247 TSPYL1Q9H0U9 437 aa15.49■□□□□ 0.07
PCNX3-202ENST00000439247 BCL9O00512 1426 aa15.49■□□□□ 0.07
PCNX3-202ENST00000439247 STX17P56962 302 aa15.48■□□□□ 0.07
PCNX3-202ENST00000439247 DHX8Q14562 1220 aaKnown RBP15.48■□□□□ 0.07
PCNX3-202ENST00000439247 CCDC151A5D8V7 595 aa15.48■□□□□ 0.07
PCNX3-202ENST00000439247 ZNF569Q5MCW4 686 aa15.48■□□□□ 0.07
PCNX3-202ENST00000439247 USP49Q70CQ1 688 aa15.48■□□□□ 0.07
PCNX3-202ENST00000439247 SLC4A9Q96Q91 983 aa15.48■□□□□ 0.07
PCNX3-202ENST00000439247 CDC5LQ99459 802 aaKnown RBP15.48■□□□□ 0.07
PCNX3-202ENST00000439247 NBPF3Q9H094 633 aa15.48■□□□□ 0.07
PCNX3-202ENST00000439247 RNF216Q9NWF9 866 aaPredicted RBP15.48■□□□□ 0.07
PCNX3-202ENST00000439247 SERTAD1Q9UHV2 236 aa15.48■□□□□ 0.07
PCNX3-202ENST00000439247 PAPPAQ13219 1627 aa15.48■□□□□ 0.07
PCNX3-202ENST00000439247 POLR2DO15514 142 aaKnown RBP15.48■□□□□ 0.07
PCNX3-202ENST00000439247 MDM2Q00987 491 aaPredicted RBP15.48■□□□□ 0.07
PCNX3-202ENST00000439247 SLC9C2Q5TAH2 1124 aa15.48■□□□□ 0.07
PCNX3-202ENST00000439247 KLHL10Q6JEL2 608 aa15.48■□□□□ 0.07
PCNX3-202ENST00000439247 SRGAP1Q7Z6B7 1085 aa15.48■□□□□ 0.07
PCNX3-202ENST00000439247 AFDNP55196 1824 aaKnown RBP15.47■□□□□ 0.07
PCNX3-202ENST00000439247 A1BGP04217 495 aa15.47■□□□□ 0.07
PCNX3-202ENST00000439247 VSNL1P62760 191 aa15.47■□□□□ 0.07
PCNX3-202ENST00000439247 CCDC82Q8N4S0 544 aa15.47■□□□□ 0.07
PCNX3-202ENST00000439247 NCOA7Q8NI08 942 aa15.47■□□□□ 0.07
PCNX3-202ENST00000439247 UBR2Q8IWV8 1755 aa15.47■□□□□ 0.07
PCNX3-202ENST00000439247 ZNF18P17022 549 aa15.47■□□□□ 0.07
PCNX3-202ENST00000439247 METAP2P50579 478 aaKnown RBP eCLIP15.47■□□□□ 0.072e-6■□□□□ 9
PCNX3-202ENST00000439247 RBL2Q08999 1139 aa15.47■□□□□ 0.07
PCNX3-202ENST00000439247 RAI14Q9P0K7 980 aa15.47■□□□□ 0.07
PCNX3-202ENST00000439247 RANBP6O60518 1105 aaKnown RBP15.46■□□□□ 0.07
PCNX3-202ENST00000439247 PPP6R2O75170 966 aa15.46■□□□□ 0.07
PCNX3-202ENST00000439247 JAKMIP3Q5VZ66 844 aa15.46■□□□□ 0.07
PCNX3-202ENST00000439247 RGS22Q8NE09 1264 aa15.46■□□□□ 0.07
PCNX3-202ENST00000439247 ACRBPQ8NEB7 543 aa15.46■□□□□ 0.07
PCNX3-202ENST00000439247 NBPF26B4DH59 902 aa15.46■□□□□ 0.07
PCNX3-202ENST00000439247 ZNF213O14771 459 aa15.46■□□□□ 0.07
PCNX3-202ENST00000439247 ZAP70P43403 619 aa15.46■□□□□ 0.07
PCNX3-202ENST00000439247 TTC39AQ5SRH9 613 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms