RNA–Protein interactions for RNA: ENST00000412714.1

LINC00388-201, long intergenic non-protein coding RNA 388, humanhuman

TSL 5 BASIC

Gene LINC00388, Length 663 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00388-201ENST00000412714 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.49■□□□□ 0.07
LINC00388-201ENST00000412714 LRP2BPQ9P2M1 347 aa15.49■□□□□ 0.07
LINC00388-201ENST00000412714 SLC45A1Q9Y2W3 748 aa15.49■□□□□ 0.07
LINC00388-201ENST00000412714 TRIM75PA6NK02 468 aa15.48■□□□□ 0.07
LINC00388-201ENST00000412714 TBC1D12O60347 775 aa15.48■□□□□ 0.07
LINC00388-201ENST00000412714 SLURP2P0DP57 97 aa15.48■□□□□ 0.07
LINC00388-201ENST00000412714 MCAMP43121 646 aa15.48■□□□□ 0.07
LINC00388-201ENST00000412714 TTC39AQ5SRH9 613 aa15.48■□□□□ 0.07
LINC00388-201ENST00000412714 SMCR8Q8TEV9 937 aaPredicted RBP15.48■□□□□ 0.07
LINC00388-201ENST00000412714 ZBTB40Q9NUA8 1239 aa15.48■□□□□ 0.07
LINC00388-201ENST00000412714 BIN2Q9UBW5 565 aaPredicted RBP15.48■□□□□ 0.07
LINC00388-201ENST00000412714 PCDHB15Q9Y5E8 787 aa15.48■□□□□ 0.07
LINC00388-201ENST00000412714 MGAMO43451 1857 aa15.48■□□□□ 0.07
LINC00388-201ENST00000412714 PHIPQ8WWQ0 1821 aa15.47■□□□□ 0.07
LINC00388-201ENST00000412714 COL2A1P02458 1487 aaPredicted RBP15.47■□□□□ 0.07
LINC00388-201ENST00000412714 UBXN2AP68543 259 aa15.47■□□□□ 0.07
LINC00388-201ENST00000412714 MTFR1Q15390 333 aa15.47■□□□□ 0.07
LINC00388-201ENST00000412714 CCDC158Q5M9N0 1113 aa15.47■□□□□ 0.07
LINC00388-201ENST00000412714 TEX11Q8IYF3 940 aa15.47■□□□□ 0.07
LINC00388-201ENST00000412714 NKX2-3Q8TAU0 364 aa15.47■□□□□ 0.07
LINC00388-201ENST00000412714 OSBPL5Q9H0X9 879 aaPredicted RBP15.47■□□□□ 0.07
LINC00388-201ENST00000412714 GPR108Q9NPR9 543 aa15.47■□□□□ 0.07
LINC00388-201ENST00000412714 FAM196BA6NMK8 535 aa15.46■□□□□ 0.07
LINC00388-201ENST00000412714 BAG3O95817 575 aa15.46■□□□□ 0.07
LINC00388-201ENST00000412714 PRKCZQ05513 592 aa15.46■□□□□ 0.07
LINC00388-201ENST00000412714 HDAC1Q13547 482 aaPredicted RBP15.46■□□□□ 0.07
LINC00388-201ENST00000412714 NAA16Q6N069 864 aaPredicted RBP15.46■□□□□ 0.07
LINC00388-201ENST00000412714 SLAIN1Q8ND83 568 aa15.46■□□□□ 0.07
LINC00388-201ENST00000412714 TBC1D2Q9BYX2 928 aa15.46■□□□□ 0.07
LINC00388-201ENST00000412714 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.46■□□□□ 0.07
LINC00388-201ENST00000412714 PNMA3Q9UL41 463 aa15.46■□□□□ 0.07
LINC00388-201ENST00000412714 AGTPBP1Q9UPW5 1226 aa15.46■□□□□ 0.07
LINC00388-201ENST00000412714 MAST2Q6P0Q8 1798 aa15.45■□□□□ 0.06
LINC00388-201ENST00000412714 IGHDP01880 384 aa15.45■□□□□ 0.06
LINC00388-201ENST00000412714 PLCG2P16885 1265 aa15.45■□□□□ 0.06
LINC00388-201ENST00000412714 POLA2Q14181 598 aa15.45■□□□□ 0.06
LINC00388-201ENST00000412714 TNNI3KQ59H18 835 aa15.45■□□□□ 0.06
LINC00388-201ENST00000412714 HABP4Q5JVS0 413 aaKnown RBP15.45■□□□□ 0.06
LINC00388-201ENST00000412714 CCDC84Q86UT8 332 aaPredicted RBP15.45■□□□□ 0.06
LINC00388-201ENST00000412714 SSH3Q8TE77 659 aa15.45■□□□□ 0.06
LINC00388-201ENST00000412714 RWDD1Q9H446 243 aaPredicted RBP15.45■□□□□ 0.06
LINC00388-201ENST00000412714 SNRKQ9NRH2 765 aa15.45■□□□□ 0.06
LINC00388-201ENST00000412714 FPGT-TNNI3KV9GXZ4 949 aa15.45■□□□□ 0.06
LINC00388-201ENST00000412714 ATAD5Q96QE3 1844 aa15.45■□□□□ 0.06
LINC00388-201ENST00000412714 TNPO2O14787 897 aaKnown RBP15.44■□□□□ 0.06
LINC00388-201ENST00000412714 SURF6O75683 361 aaKnown RBP15.44■□□□□ 0.06
LINC00388-201ENST00000412714 CCL5P13501 91 aa15.44■□□□□ 0.06
LINC00388-201ENST00000412714 ATP8B2P98198 1209 aa15.44■□□□□ 0.06
LINC00388-201ENST00000412714 PABPC4Q13310 644 aaKnown RBP eCLIP15.44■□□□□ 0.06
LINC00388-201ENST00000412714 PROCA1Q8NCQ7 364 aaPredicted RBP15.44■□□□□ 0.06
LINC00388-201ENST00000412714 ZNF280CQ8ND82 737 aa15.44■□□□□ 0.06
LINC00388-201ENST00000412714 SH3RF3Q8TEJ3 882 aaPredicted RBP15.44■□□□□ 0.06
LINC00388-201ENST00000412714 DBNDD2Q9BQY9 259 aa15.44■□□□□ 0.06
LINC00388-201ENST00000412714 RNF208Q9H0X6 261 aa15.44■□□□□ 0.06
LINC00388-201ENST00000412714 AATFQ9NY61 560 aaKnown RBP eCLIP15.44■□□□□ 0.06
LINC00388-201ENST00000412714 HERC5Q9UII4 1024 aaKnown RBP15.44■□□□□ 0.06
LINC00388-201ENST00000412714 GABRQQ9UN88 632 aa15.44■□□□□ 0.06
LINC00388-201ENST00000412714 ADCY3O60266 1144 aa15.43■□□□□ 0.06
LINC00388-201ENST00000412714 CAP2P40123 477 aa15.43■□□□□ 0.06
LINC00388-201ENST00000412714 SPP2Q13103 211 aa15.43■□□□□ 0.06
LINC00388-201ENST00000412714 TRIM34Q9BYJ4 488 aa15.43■□□□□ 0.06
LINC00388-201ENST00000412714 DHX36Q9H2U1 1008 aaKnown RBP15.43■□□□□ 0.06
LINC00388-201ENST00000412714 C1orf115Q9H7X2 142 aa15.43■□□□□ 0.06
LINC00388-201ENST00000412714 AS3MTQ9HBK9 375 aa15.43■□□□□ 0.06
LINC00388-201ENST00000412714 PI4KBQ9UBF8 816 aa15.43■□□□□ 0.06
LINC00388-201ENST00000412714 RBM19Q9Y4C8 960 aaKnown RBP15.43■□□□□ 0.06
LINC00388-201ENST00000412714 USP17L5A8MUK1 530 aa15.42■□□□□ 0.06
LINC00388-201ENST00000412714 GJB1P08034 283 aa15.42■□□□□ 0.06
LINC00388-201ENST00000412714 GJA8P48165 433 aa15.42■□□□□ 0.06
LINC00388-201ENST00000412714 FLT3LGP49771 235 aa15.42■□□□□ 0.06
LINC00388-201ENST00000412714 FAM110CQ1W6H9 321 aa15.42■□□□□ 0.06
LINC00388-201ENST00000412714 TREML2Q5T2D2 321 aa15.42■□□□□ 0.06
LINC00388-201ENST00000412714 ANKRD13CQ8N6S4 541 aa15.42■□□□□ 0.06
LINC00388-201ENST00000412714 COA7Q96BR5 231 aa15.42■□□□□ 0.06
LINC00388-201ENST00000412714 SHISA4Q96DD7 197 aa15.42■□□□□ 0.06
LINC00388-201ENST00000412714 CEP290O15078 2479 aa15.42■□□□□ 0.06
LINC00388-201ENST00000412714 LOC285556D6RIA3 1793 aa15.41■□□□□ 0.06
LINC00388-201ENST00000412714 ZBTB7BO15156 539 aaPredicted RBP15.41■□□□□ 0.06
LINC00388-201ENST00000412714 IGSF3O75054 1194 aa15.41■□□□□ 0.06
LINC00388-201ENST00000412714 CYP2E1P05181 493 aaPredicted RBP15.41■□□□□ 0.06
LINC00388-201ENST00000412714 HMGCS2P54868 508 aa15.41■□□□□ 0.06
LINC00388-201ENST00000412714 MAPKAPK5Q8IW41 473 aa15.41■□□□□ 0.06
LINC00388-201ENST00000412714 TGFBRAP1Q8WUH2 860 aa15.41■□□□□ 0.06
LINC00388-201ENST00000412714 ZNF512BQ96KM6 892 aaPredicted RBP15.41■□□□□ 0.06
LINC00388-201ENST00000412714 TAOK2Q9UL54 1235 aa15.41■□□□□ 0.06
LINC00388-201ENST00000412714 ZAP70P43403 619 aa15.4■□□□□ 0.06
LINC00388-201ENST00000412714 GCLCP48506 637 aaPredicted RBP15.4■□□□□ 0.06
LINC00388-201ENST00000412714 PPP4CP60510 307 aa15.4■□□□□ 0.06
LINC00388-201ENST00000412714 IRF5Q13568 498 aa15.4■□□□□ 0.06
LINC00388-201ENST00000412714 CRACR2BQ8N4Y2 399 aaPredicted RBP15.4■□□□□ 0.06
LINC00388-201ENST00000412714 PXYLP1Q8TE99 480 aa15.4■□□□□ 0.06
LINC00388-201ENST00000412714 DPF3Q92784 378 aa15.4■□□□□ 0.06
LINC00388-201ENST00000412714 HTATIP2Q9BUP3 242 aa15.4■□□□□ 0.06
LINC00388-201ENST00000412714 NOP58Q9Y2X3 529 aaKnown RBP15.4■□□□□ 0.06
LINC00388-201ENST00000412714 FLT1P17948 1338 aa15.4■□□□□ 0.06
LINC00388-201ENST00000412714 CDK5RAP2Q96SN8 1893 aa15.4■□□□□ 0.06
LINC00388-201ENST00000412714 MYO5AQ9Y4I1 1855 aaKnown RBP15.4■□□□□ 0.06
LINC00388-201ENST00000412714 DOCK3Q8IZD9 2030 aa15.39■□□□□ 0.05
LINC00388-201ENST00000412714 FOCADQ5VW36 1801 aa15.39■□□□□ 0.05
LINC00388-201ENST00000412714 INHAP05111 366 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms