RNA–Protein interactions for RNA: ENST00000405755.6

PDE4D-207, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-207ENST00000405755 MYH2Q9UKX2 1941 aa11.05□□□□□ -0.64
PDE4D-207ENST00000405755 USP17L8P0C7I0 530 aa11.05□□□□□ -0.64
PDE4D-207ENST00000405755 IARSP41252 1262 aaKnown RBP11.05□□□□□ -0.64
PDE4D-207ENST00000405755 BTDP43251 543 aa11.05□□□□□ -0.64
PDE4D-207ENST00000405755 ZNF445P59923 1031 aa11.05□□□□□ -0.64
PDE4D-207ENST00000405755 CEBPZQ03701 1054 aaKnown RBP11.05□□□□□ -0.64
PDE4D-207ENST00000405755 EVX2Q03828 476 aa11.05□□□□□ -0.64
PDE4D-207ENST00000405755 PDE4BQ07343 736 aa11.05□□□□□ -0.64
PDE4D-207ENST00000405755 OTUD7BQ6GQQ9 843 aa11.05□□□□□ -0.64
PDE4D-207ENST00000405755 SLF2Q8IX21 1173 aa11.05□□□□□ -0.64
PDE4D-207ENST00000405755 TGFBRAP1Q8WUH2 860 aa11.05□□□□□ -0.64
PDE4D-207ENST00000405755 ZSCAN10Q96SZ4 725 aaPredicted RBP11.05□□□□□ -0.64
PDE4D-207ENST00000405755 COA1Q9GZY4 146 aa11.05□□□□□ -0.64
PDE4D-207ENST00000405755 ZNF219Q9P2Y4 722 aaPredicted RBP11.05□□□□□ -0.64
PDE4D-207ENST00000405755 CYP2D6P10635 497 aa11.04□□□□□ -0.64
PDE4D-207ENST00000405755 XRCC6P12956 609 aaKnown RBP eCLIP11.04□□□□□ -0.64
PDE4D-207ENST00000405755 IFIT1BQ5T764 474 aaKnown RBP11.04□□□□□ -0.64
PDE4D-207ENST00000405755 ZNF654Q8IZM8 581 aa11.04□□□□□ -0.64
PDE4D-207ENST00000405755 RTFDC1Q9BY42 306 aaPredicted RBP11.04□□□□□ -0.64
PDE4D-207ENST00000405755 CFAP45Q9UL16 551 aa11.04□□□□□ -0.64
PDE4D-207ENST00000405755 ELP1O95163 1332 aa11.04□□□□□ -0.64
PDE4D-207ENST00000405755 RTN1Q16799 776 aa11.04□□□□□ -0.64
PDE4D-207ENST00000405755 DOK7Q18PE1 504 aa11.04□□□□□ -0.64
PDE4D-207ENST00000405755 CERS3Q8IU89 383 aa11.04□□□□□ -0.64
PDE4D-207ENST00000405755 ENAHQ8N8S7 591 aaPredicted RBP11.04□□□□□ -0.64
PDE4D-207ENST00000405755 FBXO18Q8NFZ0 1043 aa11.04□□□□□ -0.64
PDE4D-207ENST00000405755 LEO1Q8WVC0 666 aaPredicted RBP11.04□□□□□ -0.64
PDE4D-207ENST00000405755 ALG1Q9BT22 464 aa11.04□□□□□ -0.64
PDE4D-207ENST00000405755 CCDC196A0A1B0GTZ2 297 aa11.03□□□□□ -0.64
PDE4D-207ENST00000405755 TSPY2A6NKD2 308 aa11.03□□□□□ -0.64
PDE4D-207ENST00000405755 F8W031 263 aaPredicted RBP11.03□□□□□ -0.64
PDE4D-207ENST00000405755 CHRNA5P30532 468 aa11.03□□□□□ -0.64
PDE4D-207ENST00000405755 SBK1Q52WX2 424 aa11.03□□□□□ -0.64
PDE4D-207ENST00000405755 MAPKAPK5Q8IW41 473 aa11.03□□□□□ -0.64
PDE4D-207ENST00000405755 EYA3Q99504 573 aa11.03□□□□□ -0.64
PDE4D-207ENST00000405755 SLC26A6Q9BXS9 759 aa11.03□□□□□ -0.64
PDE4D-207ENST00000405755 GJB4Q9NTQ9 266 aa11.03□□□□□ -0.64
PDE4D-207ENST00000405755 NAV1Q8NEY1 1877 aa11.03□□□□□ -0.64
PDE4D-207ENST00000405755 POLR3DP05423 398 aaPredicted RBP11.02□□□□□ -0.64
PDE4D-207ENST00000405755 FGRP09769 529 aa11.02□□□□□ -0.64
PDE4D-207ENST00000405755 PLCG2P16885 1265 aa11.02□□□□□ -0.64
PDE4D-207ENST00000405755 PPP4CP60510 307 aa11.02□□□□□ -0.64
PDE4D-207ENST00000405755 SSRP1Q08945 709 aaKnown RBP11.02□□□□□ -0.64
PDE4D-207ENST00000405755 GNL2Q13823 731 aaKnown RBP11.02□□□□□ -0.64
PDE4D-207ENST00000405755 TRIM29Q14134 588 aa11.02□□□□□ -0.64
PDE4D-207ENST00000405755 R3HDM1Q15032 1099 aaKnown RBP11.02□□□□□ -0.64
PDE4D-207ENST00000405755 NTRK3Q16288 839 aa11.02□□□□□ -0.64
PDE4D-207ENST00000405755 FAM47AQ5JRC9 791 aa11.02□□□□□ -0.64
PDE4D-207ENST00000405755 CCDC183Q5T5S1 534 aa11.02□□□□□ -0.64
PDE4D-207ENST00000405755 TEX11Q8IYF3 940 aa11.02□□□□□ -0.64
PDE4D-207ENST00000405755 TRIM22Q8IYM9 498 aa11.02□□□□□ -0.64
PDE4D-207ENST00000405755 CCDC82Q8N4S0 544 aa11.02□□□□□ -0.64
PDE4D-207ENST00000405755 ZNF396Q96N95 335 aaPredicted RBP11.02□□□□□ -0.64
PDE4D-207ENST00000405755 AIFM3Q96NN9 605 aa11.02□□□□□ -0.64
PDE4D-207ENST00000405755 FAM217BQ9NTX9 383 aaPredicted RBP11.02□□□□□ -0.64
PDE4D-207ENST00000405755 FAM205AQ6ZU69 1335 aa11.02□□□□□ -0.64
PDE4D-207ENST00000405755 MYH15Q9Y2K3 1946 aa11.02□□□□□ -0.65
PDE4D-207ENST00000405755 ORC4O43929 436 aa11.02□□□□□ -0.65
PDE4D-207ENST00000405755 SEC23AQ15436 765 aa11.02□□□□□ -0.65
PDE4D-207ENST00000405755 C12orf60Q5U649 245 aa11.02□□□□□ -0.65
PDE4D-207ENST00000405755 STYK1Q6J9G0 422 aa11.02□□□□□ -0.65
PDE4D-207ENST00000405755 LRSAM1Q6UWE0 723 aa11.02□□□□□ -0.65
PDE4D-207ENST00000405755 CATIPQ7Z7H3 387 aa11.02□□□□□ -0.65
PDE4D-207ENST00000405755 FANCBQ8NB91 859 aa11.02□□□□□ -0.65
PDE4D-207ENST00000405755 SAP30BPQ9UHR5 308 aaKnown RBP11.02□□□□□ -0.65
PDE4D-207ENST00000405755 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.02□□□□□ -0.65
PDE4D-207ENST00000405755 GPR75-ASB3A0A0A6YYF3 556 aa11.01□□□□□ -0.65
PDE4D-207ENST00000405755 RCAN1P53805 252 aa11.01□□□□□ -0.65
PDE4D-207ENST00000405755 CMTR1Q8N1G2 835 aaKnown RBP11.01□□□□□ -0.65
PDE4D-207ENST00000405755 BICD2Q8TD16 824 aa11.01□□□□□ -0.65
PDE4D-207ENST00000405755 PANK2Q9BZ23 570 aa11.01□□□□□ -0.65
PDE4D-207ENST00000405755 FTOQ9C0B1 505 aaKnown RBP eCLIP11.01□□□□□ -0.65
PDE4D-207ENST00000405755 DBNDD1Q9H9R9 158 aa11.01□□□□□ -0.65
PDE4D-207ENST00000405755 MKNK2Q9HBH9 465 aa11.01□□□□□ -0.65
PDE4D-207ENST00000405755 MKRN1Q9UHC7 482 aaKnown RBP11.01□□□□□ -0.65
PDE4D-207ENST00000405755 NID2Q14112 1375 aa11.01□□□□□ -0.65
PDE4D-207ENST00000405755 NMT2O60551 498 aa11.01□□□□□ -0.65
PDE4D-207ENST00000405755 FMNL1O95466 1100 aaPredicted RBP11.01□□□□□ -0.65
PDE4D-207ENST00000405755 IFNAR1P17181 557 aa11.01□□□□□ -0.65
PDE4D-207ENST00000405755 WASF1Q92558 559 aa11.01□□□□□ -0.65
PDE4D-207ENST00000405755 CNKSR1Q969H4 720 aa11.01□□□□□ -0.65
PDE4D-207ENST00000405755 DYNLL2Q96FJ2 89 aa11.01□□□□□ -0.65
PDE4D-207ENST00000405755 USP28Q96RU2 1077 aa11.01□□□□□ -0.65
PDE4D-207ENST00000405755 PDGFDQ9GZP0 370 aaPredicted RBP11.01□□□□□ -0.65
PDE4D-207ENST00000405755 TTF2Q9UNY4 1162 aaKnown RBP11.01□□□□□ -0.65
PDE4D-207ENST00000405755 ECM29Q5VYK3 1845 aa11.01□□□□□ -0.65
PDE4D-207ENST00000405755 QSER1Q2KHR3 1735 aa11□□□□□ -0.65
PDE4D-207ENST00000405755 STK36Q9NRP7 1315 aa11□□□□□ -0.65
PDE4D-207ENST00000405755 ATL3Q6DD88 541 aa11□□□□□ -0.65
PDE4D-207ENST00000405755 BRAPQ7Z569 592 aa11□□□□□ -0.65
PDE4D-207ENST00000405755 GAKO14976 1311 aa11□□□□□ -0.65
PDE4D-207ENST00000405755 FLT1P17948 1338 aa11□□□□□ -0.65
PDE4D-207ENST00000405755 UBE2Q2LH0YL09 131 aa11□□□□□ -0.65
PDE4D-207ENST00000405755 NASPP49321 788 aaPredicted RBP11□□□□□ -0.65
PDE4D-207ENST00000405755 AKAP17AQ02040 695 aaKnown RBP11□□□□□ -0.65
PDE4D-207ENST00000405755 KRT40Q6A162 431 aa11□□□□□ -0.65
PDE4D-207ENST00000405755 MXD3Q9BW11 206 aa11□□□□□ -0.65
PDE4D-207ENST00000405755 SUGT1Q9Y2Z0 365 aa11□□□□□ -0.65
PDE4D-207ENST00000405755 DAGLAQ9Y4D2 1042 aa11□□□□□ -0.65
PDE4D-207ENST00000405755 SLX4Q8IY92 1834 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms