RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 LARP1BQ659C4 914 aaKnown RBP3.05□□□□□ -1.92
CHD9-202ENST00000398510 UBXN4Q92575 508 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 HVCN1Q96D96 273 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 NBPF3Q9H094 633 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 CUEDC2Q9H467 287 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 ZRANB1Q9UGI0 708 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 USP19O94966 1318 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 DIP2BQ9P265 1576 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 RPAP1Q9BWH6 1393 aaPredicted RBP3.05□□□□□ -1.92
CHD9-202ENST00000398510 PSMA7O14818 248 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 PRMT3O60678 531 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 UQCRHP07919 91 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 PTPREP23469 700 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 C16orf72Q14CZ0 275 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 ADALQ6DHV7 355 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 CNNM4Q6P4Q7 775 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 SYCE1Q8N0S2 351 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.05□□□□□ -1.92
CHD9-202ENST00000398510 TSPY2A6NKD2 308 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 LAD1O00515 517 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 IDEP14735 1019 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 MAN1A1P33908 653 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 PAFAH1B1P43034 410 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 PLCD1P51178 756 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 LETM2Q2VYF4 491 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 CFAP58Q5T655 872 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 FCHSD1Q86WN1 690 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 TRIM11Q96F44 468 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 CCDC114Q96M63 670 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 EHD2Q9NZN4 543 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 ERCC6L2Q5T890 1561 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 GOLGA8AA7E2F4 631 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 GOLGA8BA8MQT2 603 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 GNA14O95837 355 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 UBA7P41226 1012 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 CNKSR1Q969H4 720 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 NUP58Q9BVL2 599 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 ARPP21Q9UBL0 812 aaPredicted RBP3.05□□□□□ -1.92
CHD9-202ENST00000398510 TRPC5Q9UL62 973 aaPredicted RBP3.05□□□□□ -1.92
CHD9-202ENST00000398510 IQSEC3Q9UPP2 1182 aaPredicted RBP3.05□□□□□ -1.92
CHD9-202ENST00000398510 HYOU1Q9Y4L1 999 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 ALDH1L1O75891 902 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 LDHBP07195 334 aaKnown RBP3.05□□□□□ -1.92
CHD9-202ENST00000398510 CCT6AP40227 531 aaKnown RBP3.05□□□□□ -1.92
CHD9-202ENST00000398510 SARNPP82979 210 aaKnown RBP3.05□□□□□ -1.92
CHD9-202ENST00000398510 RAB11FIP4Q86YS3 637 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 TCP11L2Q8N4U5 519 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 RETREG2Q8NC44 543 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 NUP88Q99567 741 aaPredicted RBP3.05□□□□□ -1.92
CHD9-202ENST00000398510 PPP1R12CQ9BZL4 782 aa3.05□□□□□ -1.92
CHD9-202ENST00000398510 NUMA1Q14980 2115 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 PDE6CP51160 858 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 IRX3P78415 501 aaPredicted RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 TFDP1Q14186 410 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 MCCC1Q96RQ3 725 aaPredicted RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 ACEP12821 1306 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 NPHP4O75161 1426 aaPredicted RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 ERVV-2B6SEH9 535 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 C6orf229H3BNL8 230 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 HEXIM1O94992 359 aaKnown RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 PSMA3P25788 255 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 RASSF2P50749 326 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 YARSP54577 528 aaKnown RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 IFFO1Q0D2I5 559 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 SEMA3FQ13275 785 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 CAPZA3Q96KX2 299 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 RPS6KC1Q96S38 1066 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 SEC62Q99442 399 aaKnown RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 PSDA5PKW4 1024 aaPredicted RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 GOLGA8IPA6NC78 632 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 STAT6P42226 847 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 STX1AQ16623 288 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 KYAT1Q16773 422 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 AKAP4Q5JQC9 854 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 KCNV1Q6PIU1 500 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 PHLDB2Q86SQ0 1253 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 DAAM1Q9Y4D1 1078 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 ABCC12Q96J65 1359 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 SPATA31A6Q5VVP1 1343 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 NUTM2FA1L443 756 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 DCDC2CA8MYV0 355 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 SP100P23497 879 aaPredicted RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 NUCB1Q02818 461 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 NMIQ13287 307 aaPredicted RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 LGSNQ5TDP6 509 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 NDUFAF2Q8N183 169 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 NFATC2IPQ8NCF5 419 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 TEX12Q9BXU0 123 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 NUP62CLQ9H1M0 184 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 MTUS1Q9ULD2 1270 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 USTQ9Y2C2 406 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 KDM6AO15550 1401 aaPredicted RBP3.04□□□□□ -1.92
CHD9-202ENST00000398510 H7C1D1 291 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 SEMA3EO15041 775 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 PPFIA2O75334 1257 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 SSBP05455 408 aaKnown RBP eCLIP3.04□□□□□ -1.92
CHD9-202ENST00000398510 METAP2P50579 478 aaKnown RBP eCLIP3.04□□□□□ -1.92
CHD9-202ENST00000398510 KCNH2Q12809 1159 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 MYO1EQ12965 1108 aa3.04□□□□□ -1.92
CHD9-202ENST00000398510 BBS5Q8N3I7 341 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms