RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 SYT10Q6XYQ8 523 aa12.01□□□□□ -0.49
CALD1-203ENST00000393118 NOSTRINQ8IVI9 506 aa12.01□□□□□ -0.49
CALD1-203ENST00000393118 FANCBQ8NB91 859 aa12.01□□□□□ -0.49
CALD1-203ENST00000393118 CDK5RAP3Q96JB5 506 aa12.01□□□□□ -0.49
CALD1-203ENST00000393118 PLIN2Q99541 437 aa12.01□□□□□ -0.49
CALD1-203ENST00000393118 RTCBQ9Y3I0 505 aaKnown RBP12.01□□□□□ -0.49
CALD1-203ENST00000393118 RFX7Q2KHR2 1363 aa12.01□□□□□ -0.49
CALD1-203ENST00000393118 F8W031 263 aaPredicted RBP12.01□□□□□ -0.49
CALD1-203ENST00000393118 CMA1P23946 247 aa12.01□□□□□ -0.49
CALD1-203ENST00000393118 KIF5BP33176 963 aa12.01□□□□□ -0.49
CALD1-203ENST00000393118 RASSF4Q9H2L5 321 aa12.01□□□□□ -0.49
CALD1-203ENST00000393118 MAGEC2Q9UBF1 373 aaPredicted RBP12.01□□□□□ -0.49
CALD1-203ENST00000393118 TSPY3P0CV98 308 aa12.01□□□□□ -0.49
CALD1-203ENST00000393118 TSPY8P0CW00 308 aa12.01□□□□□ -0.49
CALD1-203ENST00000393118 IBSPP21815 317 aaPredicted RBP12.01□□□□□ -0.49
CALD1-203ENST00000393118 CDC27P30260 824 aa12.01□□□□□ -0.49
CALD1-203ENST00000393118 HEATR3Q7Z4Q2 680 aa12.01□□□□□ -0.49
CALD1-203ENST00000393118 DHX37Q8IY37 1157 aaKnown RBP12.01□□□□□ -0.49
CALD1-203ENST00000393118 POLR3EQ9NVU0 708 aa12.01□□□□□ -0.49
CALD1-203ENST00000393118 NWD1Q149M9 1564 aa12.01□□□□□ -0.49
CALD1-203ENST00000393118 CUTAO60888 179 aa12□□□□□ -0.49
CALD1-203ENST00000393118 SSBP05455 408 aaKnown RBP eCLIP12□□□□□ -0.49
CALD1-203ENST00000393118 SLC39A14Q15043 492 aa12□□□□□ -0.49
CALD1-203ENST00000393118 ERFEQ4G0M1 354 aa12□□□□□ -0.49
CALD1-203ENST00000393118 TMCO3Q6UWJ1 677 aa12□□□□□ -0.49
CALD1-203ENST00000393118 SENP2Q9HC62 589 aa12□□□□□ -0.49
CALD1-203ENST00000393118 FMN2Q9NZ56 1722 aa12□□□□□ -0.49
CALD1-203ENST00000393118 ERVV-1B6SEH8 477 aa12□□□□□ -0.49
CALD1-203ENST00000393118 KIF2AO00139 706 aaPredicted RBP12□□□□□ -0.49
CALD1-203ENST00000393118 RPS8P62241 208 aaKnown RBP12□□□□□ -0.49
CALD1-203ENST00000393118 CDCA7Q9BWT1 371 aaPredicted RBP12□□□□□ -0.49
CALD1-203ENST00000393118 ZSWIM4Q9H7M6 989 aa12□□□□□ -0.49
CALD1-203ENST00000393118 EIF2AK3Q9NZJ5 1116 aaKnown RBP12□□□□□ -0.49
CALD1-203ENST00000393118 SAP30BPQ9UHR5 308 aaKnown RBP12□□□□□ -0.49
CALD1-203ENST00000393118 RTL9Q8NET4 1388 aa12□□□□□ -0.49
CALD1-203ENST00000393118 KIF28PB7ZC32 967 aa12□□□□□ -0.49
CALD1-203ENST00000393118 UBAP1LF5GYI3 381 aa12□□□□□ -0.49
CALD1-203ENST00000393118 BAG3O95817 575 aa12□□□□□ -0.49
CALD1-203ENST00000393118 FDPSP14324 419 aaKnown RBP12□□□□□ -0.49
CALD1-203ENST00000393118 GNG11P61952 73 aa12□□□□□ -0.49
CALD1-203ENST00000393118 LRRC8AQ8IWT6 810 aa12□□□□□ -0.49
CALD1-203ENST00000393118 SERTAD1Q9UHV2 236 aa12□□□□□ -0.49
CALD1-203ENST00000393118 A0A1W2PQ27 194 aa12□□□□□ -0.49
CALD1-203ENST00000393118 A0A1W2PQ64 194 aa12□□□□□ -0.49
CALD1-203ENST00000393118 A0A1W2PQD8 194 aa12□□□□□ -0.49
CALD1-203ENST00000393118 ZSCAN12O43309 604 aa12□□□□□ -0.49
CALD1-203ENST00000393118 KCNQ2O43526 872 aa12□□□□□ -0.49
CALD1-203ENST00000393118 CSF1RP07333 972 aa12□□□□□ -0.49
CALD1-203ENST00000393118 UBA7P41226 1012 aa12□□□□□ -0.49
CALD1-203ENST00000393118 LMAN1P49257 510 aa12□□□□□ -0.49
CALD1-203ENST00000393118 KANK3Q6NY19 840 aa12□□□□□ -0.49
CALD1-203ENST00000393118 PIK3AP1Q6ZUJ8 805 aa12□□□□□ -0.49
CALD1-203ENST00000393118 MAPK8IP1Q9UQF2 711 aa12□□□□□ -0.49
CALD1-203ENST00000393118 COL15A1P39059 1388 aa11.99□□□□□ -0.49
CALD1-203ENST00000393118 MPHOSPH10O00566 681 aaKnown RBP11.99□□□□□ -0.49
CALD1-203ENST00000393118 RBM5P52756 815 aaKnown RBP eCLIP11.99□□□□□ -0.49
CALD1-203ENST00000393118 ANTXR2P58335 489 aa11.99□□□□□ -0.49
CALD1-203ENST00000393118 RRAGBQ5VZM2 374 aa11.99□□□□□ -0.49
CALD1-203ENST00000393118 CCNL1Q9UK58 526 aaPredicted RBP11.99□□□□□ -0.49
CALD1-203ENST00000393118 NFE2L3Q9Y4A8 694 aa11.99□□□□□ -0.49
CALD1-203ENST00000393118 AP5Z1O43299 807 aa11.99□□□□□ -0.49
CALD1-203ENST00000393118 STIM1Q13586 685 aa11.99□□□□□ -0.49
CALD1-203ENST00000393118 ARHGAP29Q52LW3 1261 aa11.99□□□□□ -0.49
CALD1-203ENST00000393118 ZSCAN29Q8IWY8 852 aaPredicted RBP11.99□□□□□ -0.49
CALD1-203ENST00000393118 PCDHA5Q9Y5H7 936 aa11.99□□□□□ -0.49
CALD1-203ENST00000393118 LTN1O94822 1766 aa11.99□□□□□ -0.49
CALD1-203ENST00000393118 NKX1-1Q15270 411 aaPredicted RBP11.99□□□□□ -0.49
CALD1-203ENST00000393118 SPTY2D1Q68D10 685 aaPredicted RBP11.99□□□□□ -0.49
CALD1-203ENST00000393118 LRP10Q7Z4F1 713 aa11.99□□□□□ -0.49
CALD1-203ENST00000393118 NYXQ9GZU5 481 aa11.99□□□□□ -0.49
CALD1-203ENST00000393118 ZHX3Q9H4I2 956 aa11.99□□□□□ -0.49
CALD1-203ENST00000393118 ZNF219Q9P2Y4 722 aaPredicted RBP11.99□□□□□ -0.49
CALD1-203ENST00000393118 SEC63Q9UGP8 760 aaKnown RBP11.99□□□□□ -0.49
CALD1-203ENST00000393118 N4BP3O15049 544 aa11.98□□□□□ -0.49
CALD1-203ENST00000393118 LDHBP07195 334 aaKnown RBP11.98□□□□□ -0.49
CALD1-203ENST00000393118 BMS1Q14692 1282 aaKnown RBP11.98□□□□□ -0.49
CALD1-203ENST00000393118 CCDC144BQ3MJ40 725 aa11.98□□□□□ -0.49
CALD1-203ENST00000393118 GRAMD1CQ8IYS0 662 aa11.98□□□□□ -0.49
CALD1-203ENST00000393118 MRFAP1L1Q96HT8 127 aa11.98□□□□□ -0.49
CALD1-203ENST00000393118 CDHR2Q9BYE9 1310 aa11.98□□□□□ -0.49
CALD1-203ENST00000393118 POSTNQ15063 836 aa11.98□□□□□ -0.49
CALD1-203ENST00000393118 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.98□□□□□ -0.49
CALD1-203ENST00000393118 TOPAZ1Q8N9V7 1692 aa11.98□□□□□ -0.49
CALD1-203ENST00000393118 GOLGA8FQ08AF8 430 aa11.98□□□□□ -0.49
CALD1-203ENST00000393118 GOLGA8DPQ0D2H9 430 aa11.98□□□□□ -0.49
CALD1-203ENST00000393118 NUP88Q99567 741 aaPredicted RBP11.98□□□□□ -0.49
CALD1-203ENST00000393118 KCNF1Q9H3M0 494 aa11.98□□□□□ -0.49
CALD1-203ENST00000393118 FANCLQ9NW38 375 aa11.98□□□□□ -0.49
CALD1-203ENST00000393118 SOS2Q07890 1332 aaPredicted RBP11.98□□□□□ -0.49
CALD1-203ENST00000393118 CPDO75976 1380 aa11.97□□□□□ -0.49
CALD1-203ENST00000393118 ATP1A3P13637 1013 aa11.97□□□□□ -0.49
CALD1-203ENST00000393118 PICALMQ13492 652 aa11.97□□□□□ -0.49
CALD1-203ENST00000393118 FMR1NBQ8N0W7 255 aaPredicted RBP11.97□□□□□ -0.49
CALD1-203ENST00000393118 ZNF397Q8NF99 534 aaPredicted RBP11.97□□□□□ -0.49
CALD1-203ENST00000393118 ZNF526Q8TF50 670 aaPredicted RBP11.97□□□□□ -0.49
CALD1-203ENST00000393118 SRP68Q9UHB9 627 aaKnown RBP11.97□□□□□ -0.49
CALD1-203ENST00000393118 UBE2Q2LH0YL09 131 aa11.97□□□□□ -0.49
CALD1-203ENST00000393118 EIF5P55010 431 aaKnown RBP11.97□□□□□ -0.49
CALD1-203ENST00000393118 HSP90B2PQ58FF3 399 aa11.97□□□□□ -0.49
CALD1-203ENST00000393118 DRC1Q96MC2 740 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms