RNA–Protein interactions for RNA: ENST00000371561.7

GRIN1-208, Transcript of glutamate ionotropic receptor NMDA type subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GRIN1, Length 5,149 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN1-208ENST00000371561 FYB2Q5VWT5 728 aa22.72■■□□□ 1.23
GRIN1-208ENST00000371561 URB2Q14146 1524 aaKnown RBP22.72■■□□□ 1.23
GRIN1-208ENST00000371561 JAK2O60674 1132 aa22.72■■□□□ 1.23
GRIN1-208ENST00000371561 PCK1P35558 622 aa22.72■■□□□ 1.23
GRIN1-208ENST00000371561 SND1Q7KZF4 910 aaKnown RBP eCLIP22.72■■□□□ 1.23
GRIN1-208ENST00000371561 PLBD2Q8NHP8 589 aa22.72■■□□□ 1.23
GRIN1-208ENST00000371561 STX10O60499 249 aa22.72■■□□□ 1.23
GRIN1-208ENST00000371561 DDB1Q16531 1140 aa22.72■■□□□ 1.23
GRIN1-208ENST00000371561 XPO4Q9C0E2 1151 aaKnown RBP22.72■■□□□ 1.23
GRIN1-208ENST00000371561 BCL2L12Q9HB09 334 aa22.72■■□□□ 1.23
GRIN1-208ENST00000371561 HOXC9P31274 260 aa22.72■■□□□ 1.23
GRIN1-208ENST00000371561 TPD52P55327 224 aaPredicted RBP22.72■■□□□ 1.23
GRIN1-208ENST00000371561 CACNA2D3Q8IZS8 1091 aa22.72■■□□□ 1.23
GRIN1-208ENST00000371561 SMC1BQ8NDV3 1235 aa22.72■■□□□ 1.23
GRIN1-208ENST00000371561 XAGE2Q96GT9 111 aa22.72■■□□□ 1.23
GRIN1-208ENST00000371561 GCP02774 474 aa22.71■■□□□ 1.23
GRIN1-208ENST00000371561 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.71■■□□□ 1.23
GRIN1-208ENST00000371561 RIMS2Q9UQ26 1411 aa22.71■■□□□ 1.23
GRIN1-208ENST00000371561 DTNBO60941 627 aa22.71■■□□□ 1.23
GRIN1-208ENST00000371561 VEZTQ9HBM0 779 aa22.71■■□□□ 1.23
GRIN1-208ENST00000371561 PPP2R5BQ15173 497 aa22.71■■□□□ 1.23
GRIN1-208ENST00000371561 CCDC84Q86UT8 332 aaPredicted RBP22.71■■□□□ 1.23
GRIN1-208ENST00000371561 TEX11Q8IYF3 940 aa22.71■■□□□ 1.23
GRIN1-208ENST00000371561 MRPS9P82933 396 aaKnown RBP22.71■■□□□ 1.23
GRIN1-208ENST00000371561 PSMB7Q99436 277 aa22.71■■□□□ 1.23
GRIN1-208ENST00000371561 CCNT1O60563 726 aaKnown RBP22.7■■□□□ 1.23
GRIN1-208ENST00000371561 VSIG1Q86XK7 387 aa22.7■■□□□ 1.23
GRIN1-208ENST00000371561 LMNTD2Q8IXW0 634 aa22.7■■□□□ 1.23
GRIN1-208ENST00000371561 PHKBQ93100 1093 aa22.7■■□□□ 1.23
GRIN1-208ENST00000371561 PRDM1O75626 825 aa22.7■■□□□ 1.22
GRIN1-208ENST00000371561 PUM3Q15397 648 aaKnown RBP22.7■■□□□ 1.22
GRIN1-208ENST00000371561 CFAP221Q4G0U5 840 aa22.7■■□□□ 1.22
GRIN1-208ENST00000371561 KLHL7Q8IXQ5 586 aa22.7■■□□□ 1.22
GRIN1-208ENST00000371561 AGTPBP1Q9UPW5 1226 aa22.7■■□□□ 1.22
GRIN1-208ENST00000371561 ITGA6P23229 1130 aa22.7■■□□□ 1.22
GRIN1-208ENST00000371561 GPCPD1Q9NPB8 672 aa22.7■■□□□ 1.22
GRIN1-208ENST00000371561 TSKSQ9UJT2 592 aa22.7■■□□□ 1.22
GRIN1-208ENST00000371561 TRIM35Q9UPQ4 493 aa22.7■■□□□ 1.22
GRIN1-208ENST00000371561 NPC1L1Q9UHC9 1359 aa22.7■■□□□ 1.22
GRIN1-208ENST00000371561 SP4Q02446 784 aa22.69■■□□□ 1.22
GRIN1-208ENST00000371561 IP6K1Q92551 441 aa22.69■■□□□ 1.22
GRIN1-208ENST00000371561 FAM204AQ9H8W3 233 aa22.69■■□□□ 1.22
GRIN1-208ENST00000371561 LRWD1Q9UFC0 647 aa22.69■■□□□ 1.22
GRIN1-208ENST00000371561 MKRN1Q9UHC7 482 aaKnown RBP22.69■■□□□ 1.22
GRIN1-208ENST00000371561 UGGT2Q9NYU1 1516 aa22.69■■□□□ 1.22
GRIN1-208ENST00000371561 CALUO43852 315 aaPredicted RBP22.69■■□□□ 1.22
GRIN1-208ENST00000371561 HERC4Q5GLZ8 1057 aaPredicted RBP22.69■■□□□ 1.22
GRIN1-208ENST00000371561 PNMA8AQ86V59 439 aaPredicted RBP22.69■■□□□ 1.22
GRIN1-208ENST00000371561 ASIC3Q9UHC3 531 aa22.69■■□□□ 1.22
GRIN1-208ENST00000371561 ZNF790Q6PG37 636 aa22.69■■□□□ 1.22
GRIN1-208ENST00000371561 TAOK1Q7L7X3 1001 aa22.69■■□□□ 1.22
GRIN1-208ENST00000371561 TRMT44Q8IYL2 757 aaKnown RBP22.69■■□□□ 1.22
GRIN1-208ENST00000371561 MYL10Q9BUA6 226 aa22.69■■□□□ 1.22
GRIN1-208ENST00000371561 EIF2AK4Q9P2K8 1649 aaKnown RBP22.69■■□□□ 1.22
GRIN1-208ENST00000371561 LAMC3Q9Y6N6 1575 aa22.69■■□□□ 1.22
GRIN1-208ENST00000371561 ABCC1P33527 1531 aa22.68■■□□□ 1.22
GRIN1-208ENST00000371561 HSPA1LP34931 641 aa22.68■■□□□ 1.22
GRIN1-208ENST00000371561 CTTNBP2NLQ9P2B4 639 aa22.68■■□□□ 1.22
GRIN1-208ENST00000371561 WWC3Q9ULE0 1092 aa22.68■■□□□ 1.22
GRIN1-208ENST00000371561 KLHL30Q0D2K2 578 aa22.68■■□□□ 1.22
GRIN1-208ENST00000371561 NONOQ15233 471 aaKnown RBP eCLIP22.68■■□□□ 1.22
GRIN1-208ENST00000371561 CABLES1Q8TDN4 633 aa22.68■■□□□ 1.22
GRIN1-208ENST00000371561 RPGRIP1Q96KN7 1286 aa22.68■■□□□ 1.22
GRIN1-208ENST00000371561 RPS6KA1Q15418 735 aa22.68■■□□□ 1.22
GRIN1-208ENST00000371561 CEP85LQ5SZL2 805 aa22.68■■□□□ 1.22
GRIN1-208ENST00000371561 MRRFQ96E11 262 aaKnown RBP22.68■■□□□ 1.22
GRIN1-208ENST00000371561 FLOT1O75955 427 aa22.67■■□□□ 1.22
GRIN1-208ENST00000371561 SMTNP53814 917 aa22.67■■□□□ 1.22
GRIN1-208ENST00000371561 SNX29Q8TEQ0 813 aa22.67■■□□□ 1.22
GRIN1-208ENST00000371561 GLT8D2Q9H1C3 349 aa22.67■■□□□ 1.22
GRIN1-208ENST00000371561 DMRT2Q9Y5R5 561 aa22.67■■□□□ 1.22
GRIN1-208ENST00000371561 IL13P35225 146 aa22.67■■□□□ 1.22
GRIN1-208ENST00000371561 LIN9Q5TKA1 542 aa22.67■■□□□ 1.22
GRIN1-208ENST00000371561 FCHSD1Q86WN1 690 aa22.67■■□□□ 1.22
GRIN1-208ENST00000371561 NELFBQ8WX92 580 aa22.67■■□□□ 1.22
GRIN1-208ENST00000371561 PPP1R12CQ9BZL4 782 aa22.67■■□□□ 1.22
GRIN1-208ENST00000371561 IRX5P78411 483 aaPredicted RBP22.67■■□□□ 1.22
GRIN1-208ENST00000371561 SEPT6Q14141 434 aa22.67■■□□□ 1.22
GRIN1-208ENST00000371561 SAP30BPQ9UHR5 308 aaKnown RBP22.67■■□□□ 1.22
GRIN1-208ENST00000371561 SH3TC1Q8TE82 1336 aa22.67■■□□□ 1.22
GRIN1-208ENST00000371561 BRD3Q15059 726 aa22.66■■□□□ 1.22
GRIN1-208ENST00000371561 PAXIP1Q6ZW49 1069 aaPredicted RBP22.66■■□□□ 1.22
GRIN1-208ENST00000371561 KRT25Q7Z3Z0 450 aa22.66■■□□□ 1.22
GRIN1-208ENST00000371561 PKD2L1Q9P0L9 805 aa22.66■■□□□ 1.22
GRIN1-208ENST00000371561 RNF123Q5XPI4 1314 aa22.66■■□□□ 1.22
GRIN1-208ENST00000371561 ZNF500O60304 480 aaPredicted RBP22.66■■□□□ 1.22
GRIN1-208ENST00000371561 BUB1BO60566 1050 aaPredicted RBP22.66■■□□□ 1.22
GRIN1-208ENST00000371561 MTMR3Q13615 1198 aa22.66■■□□□ 1.22
GRIN1-208ENST00000371561 MYSM1Q5VVJ2 828 aa22.66■■□□□ 1.22
GRIN1-208ENST00000371561 ADALQ6DHV7 355 aa22.66■■□□□ 1.22
GRIN1-208ENST00000371561 KIAA1468Q9P260 1216 aa22.66■■□□□ 1.22
GRIN1-208ENST00000371561 CCDC51Q96ER9 411 aa22.66■■□□□ 1.22
GRIN1-208ENST00000371561 FEZ2Q9UHY8 353 aaPredicted RBP22.66■■□□□ 1.22
GRIN1-208ENST00000371561 RTCBQ9Y3I0 505 aaKnown RBP22.66■■□□□ 1.22
GRIN1-208ENST00000371561 HGSO14964 777 aaPredicted RBP22.66■■□□□ 1.22
GRIN1-208ENST00000371561 CLNS1AP54105 237 aaKnown RBP22.66■■□□□ 1.22
GRIN1-208ENST00000371561 ERCC6LQ2NKX8 1250 aa22.66■■□□□ 1.22
GRIN1-208ENST00000371561 SUCLG2Q96I99 432 aa22.66■■□□□ 1.22
GRIN1-208ENST00000371561 HARSP12081 509 aaKnown RBP22.65■■□□□ 1.22
GRIN1-208ENST00000371561 ME3Q16798 604 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms