RNA–Protein interactions for RNA: ENST00000371513.9

SCP2-202, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-202ENST00000371513 SCRN1Q12765 414 aa20.65■□□□□ 0.9
SCP2-202ENST00000371513 NFXL1Q6ZNB6 911 aa20.65■□□□□ 0.9
SCP2-202ENST00000371513 OGFOD1Q8N543 542 aa20.65■□□□□ 0.9
SCP2-202ENST00000371513 GMLQ99445 158 aa20.65■□□□□ 0.9
SCP2-202ENST00000371513 DDX4Q9NQI0 724 aaKnown RBP20.65■□□□□ 0.9
SCP2-202ENST00000371513 BRPF3Q9ULD4 1205 aa20.65■□□□□ 0.9
SCP2-202ENST00000371513 NUCB2P80303 420 aa20.65■□□□□ 0.9
SCP2-202ENST00000371513 LY9Q9HBG7 655 aa20.65■□□□□ 0.9
SCP2-202ENST00000371513 MKNK2Q9HBH9 465 aa20.65■□□□□ 0.9
SCP2-202ENST00000371513 GOLGA8BA8MQT2 603 aa20.64■□□□□ 0.89
SCP2-202ENST00000371513 GJB2P29033 226 aa20.64■□□□□ 0.89
SCP2-202ENST00000371513 AGBL3Q8NEM8 1001 aa20.64■□□□□ 0.89
SCP2-202ENST00000371513 SYT17Q9BSW7 474 aa20.64■□□□□ 0.89
SCP2-202ENST00000371513 PSME4Q14997 1843 aa20.64■□□□□ 0.89
SCP2-202ENST00000371513 ROBO3Q96MS0 1386 aa20.64■□□□□ 0.89
SCP2-202ENST00000371513 CACNB3P54284 484 aa20.63■□□□□ 0.89
SCP2-202ENST00000371513 NFIAQ12857 509 aa20.63■□□□□ 0.89
SCP2-202ENST00000371513 WTAPQ15007 396 aa20.63■□□□□ 0.89
SCP2-202ENST00000371513 TNIP1Q15025 636 aa20.63■□□□□ 0.89
SCP2-202ENST00000371513 ARHGAP27Q6ZUM4 889 aa20.63■□□□□ 0.89
SCP2-202ENST00000371513 MTA3Q9BTC8 594 aa20.63■□□□□ 0.89
SCP2-202ENST00000371513 SENP2Q9HC62 589 aa20.63■□□□□ 0.89
SCP2-202ENST00000371513 LIFRP42702 1097 aa20.63■□□□□ 0.89
SCP2-202ENST00000371513 PKP1Q13835 747 aa20.63■□□□□ 0.89
SCP2-202ENST00000371513 RAB3GAP1Q15042 981 aa20.63■□□□□ 0.89
SCP2-202ENST00000371513 FAM47AQ5JRC9 791 aa20.63■□□□□ 0.89
SCP2-202ENST00000371513 IQCA1Q86XH1 822 aa20.63■□□□□ 0.89
SCP2-202ENST00000371513 RAB11FIP4Q86YS3 637 aa20.63■□□□□ 0.89
SCP2-202ENST00000371513 NCOA5Q9HCD5 579 aaKnown RBP20.63■□□□□ 0.89
SCP2-202ENST00000371513 ARFGEF1Q9Y6D6 1849 aa20.63■□□□□ 0.89
SCP2-202ENST00000371513 CDK5RAP2Q96SN8 1893 aa20.62■□□□□ 0.89
SCP2-202ENST00000371513 CCDC69A6NI79 296 aa20.62■□□□□ 0.89
SCP2-202ENST00000371513 TSPY2A6NKD2 308 aa20.62■□□□□ 0.89
SCP2-202ENST00000371513 PRELPP51888 382 aa20.62■□□□□ 0.89
SCP2-202ENST00000371513 TTC6Q86TZ1 520 aa20.62■□□□□ 0.89
SCP2-202ENST00000371513 PRMT6Q96LA8 375 aaPredicted RBP20.62■□□□□ 0.89
SCP2-202ENST00000371513 OSBPL5Q9H0X9 879 aaPredicted RBP20.62■□□□□ 0.89
SCP2-202ENST00000371513 TDRD3Q9H7E2 651 aaKnown RBP20.62■□□□□ 0.89
SCP2-202ENST00000371513 ZNF287Q9HBT7 754 aa20.62■□□□□ 0.89
SCP2-202ENST00000371513 TNKSO95271 1327 aa20.62■□□□□ 0.89
SCP2-202ENST00000371513 SGMS1Q86VZ5 419 aa20.61■□□□□ 0.89
SCP2-202ENST00000371513 SLC44A5Q8NCS7 719 aa20.61■□□□□ 0.89
SCP2-202ENST00000371513 ZSCAN10Q96SZ4 725 aaPredicted RBP20.61■□□□□ 0.89
SCP2-202ENST00000371513 EIF6P56537 245 aaKnown RBP20.61■□□□□ 0.89
SCP2-202ENST00000371513 DLGAP5Q15398 846 aa20.61■□□□□ 0.89
SCP2-202ENST00000371513 TCP10Q12799 353 aa20.6■□□□□ 0.89
SCP2-202ENST00000371513 APOA5Q6Q788 366 aa20.6■□□□□ 0.89
SCP2-202ENST00000371513 C16orf86Q6ZW13 317 aa20.6■□□□□ 0.89
SCP2-202ENST00000371513 ZNF444Q8N0Y2 327 aaPredicted RBP20.6■□□□□ 0.89
SCP2-202ENST00000371513 TMTC2Q8N394 836 aa20.6■□□□□ 0.89
SCP2-202ENST00000371513 CHMP4CQ96CF2 233 aa20.6■□□□□ 0.89
SCP2-202ENST00000371513 HPS5Q9UPZ3 1129 aa20.6■□□□□ 0.89
SCP2-202ENST00000371513 SLC12A7Q9Y666 1083 aa20.6■□□□□ 0.89
SCP2-202ENST00000371513 DDX60LQ5H9U9 1706 aaKnown RBP20.6■□□□□ 0.89
SCP2-202ENST00000371513 SPDYE2BA6NHP3 402 aa20.6■□□□□ 0.89
SCP2-202ENST00000371513 SPDYE6P0CI01 402 aa20.6■□□□□ 0.89
SCP2-202ENST00000371513 CDK8P49336 464 aa20.6■□□□□ 0.89
SCP2-202ENST00000371513 TFAP4Q01664 338 aa20.6■□□□□ 0.89
SCP2-202ENST00000371513 SYNE3Q6ZMZ3 975 aa20.6■□□□□ 0.89
SCP2-202ENST00000371513 IDI2Q9BXS1 227 aa20.6■□□□□ 0.89
SCP2-202ENST00000371513 ZBTB43O43298 467 aa20.59■□□□□ 0.89
SCP2-202ENST00000371513 JAK2O60674 1132 aa20.59■□□□□ 0.89
SCP2-202ENST00000371513 NT5C2P49902 561 aa20.59■□□□□ 0.89
SCP2-202ENST00000371513 METAP2P50579 478 aaKnown RBP eCLIP20.59■□□□□ 0.89
SCP2-202ENST00000371513 MICU3Q86XE3 530 aa20.59■□□□□ 0.89
SCP2-202ENST00000371513 ENAHQ8N8S7 591 aaPredicted RBP20.59■□□□□ 0.89
SCP2-202ENST00000371513 TNPO1Q92973 898 aaKnown RBP20.59■□□□□ 0.89
SCP2-202ENST00000371513 LLPHQ9BRT6 129 aaKnown RBP20.59■□□□□ 0.89
SCP2-202ENST00000371513 FOCADQ5VW36 1801 aa20.59■□□□□ 0.89
SCP2-202ENST00000371513 FZD9O00144 591 aa20.58■□□□□ 0.89
SCP2-202ENST00000371513 HLA-DOAP06340 250 aa20.58■□□□□ 0.89
SCP2-202ENST00000371513 RXRAP19793 462 aa20.58■□□□□ 0.89
SCP2-202ENST00000371513 SEC23AQ15436 765 aa20.58■□□□□ 0.89
SCP2-202ENST00000371513 ZFPM1Q8IX07 1006 aa20.58■□□□□ 0.89
SCP2-202ENST00000371513 MYL10Q9BUA6 226 aa20.58■□□□□ 0.89
SCP2-202ENST00000371513 TMOD2Q9NZR1 351 aa20.58■□□□□ 0.89
SCP2-202ENST00000371513 FAM198AQ9UFP1 575 aa20.58■□□□□ 0.89
SCP2-202ENST00000371513 GJA3Q9Y6H8 435 aa20.58■□□□□ 0.89
SCP2-202ENST00000371513 DHX16O60231 1041 aaKnown RBP20.58■□□□□ 0.88
SCP2-202ENST00000371513 TSPY3P0CV98 308 aa20.58■□□□□ 0.88
SCP2-202ENST00000371513 TSPY8P0CW00 308 aa20.58■□□□□ 0.88
SCP2-202ENST00000371513 IFIT1BQ5T764 474 aaKnown RBP20.58■□□□□ 0.88
SCP2-202ENST00000371513 FOXD4L5Q5VV16 416 aaPredicted RBP20.58■□□□□ 0.88
SCP2-202ENST00000371513 NSUN7Q8NE18 718 aaKnown RBP20.58■□□□□ 0.88
SCP2-202ENST00000371513 FOXD4L4Q8WXT5 416 aaPredicted RBP20.58■□□□□ 0.88
SCP2-202ENST00000371513 DDX11Q96FC9 970 aa20.58■□□□□ 0.88
SCP2-202ENST00000371513 MYH1P12882 1939 aa20.58■□□□□ 0.88
SCP2-202ENST00000371513 CPLX1O14810 134 aa20.57■□□□□ 0.88
SCP2-202ENST00000371513 NMT2O60551 498 aa20.57■□□□□ 0.88
SCP2-202ENST00000371513 RASA1P20936 1047 aa20.57■□□□□ 0.88
SCP2-202ENST00000371513 ZSCAN29Q8IWY8 852 aaPredicted RBP20.57■□□□□ 0.88
SCP2-202ENST00000371513 CCDC144CPQ8IYA2 1237 aa20.57■□□□□ 0.88
SCP2-202ENST00000371513 ZDHHC9Q9Y397 364 aa20.57■□□□□ 0.88
SCP2-202ENST00000371513 CLRN2A0PK11 232 aa20.56■□□□□ 0.88
SCP2-202ENST00000371513 PTPDC1A2A3K4 754 aa20.56■□□□□ 0.88
SCP2-202ENST00000371513 GOLGA8AA7E2F4 631 aa20.56■□□□□ 0.88
SCP2-202ENST00000371513 CTDNEP1O95476 244 aa20.56■□□□□ 0.88
SCP2-202ENST00000371513 LMNB1P20700 586 aa20.56■□□□□ 0.88
SCP2-202ENST00000371513 SYT1P21579 422 aa20.56■□□□□ 0.88
SCP2-202ENST00000371513 RPS12P25398 132 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms