RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 ATP6V1G2O95670 118 aa13.05□□□□□ -0.32
CNOT4-203ENST00000361528 SLC4A2P04920 1241 aa13.05□□□□□ -0.32
CNOT4-203ENST00000361528 ATP1A3P13637 1013 aa13.05□□□□□ -0.32
CNOT4-203ENST00000361528 LSP1P33241 339 aa13.05□□□□□ -0.32
CNOT4-203ENST00000361528 LRRC23Q53EV4 343 aaPredicted RBP13.05□□□□□ -0.32
CNOT4-203ENST00000361528 NBPF14Q5TI25 921 aa13.05□□□□□ -0.32
CNOT4-203ENST00000361528 CCNI2Q6ZMN8 369 aaPredicted RBP13.05□□□□□ -0.32
CNOT4-203ENST00000361528 TBC1D5Q92609 795 aa13.05□□□□□ -0.32
CNOT4-203ENST00000361528 DPF2Q92785 391 aa13.05□□□□□ -0.32
CNOT4-203ENST00000361528 TSC22D3Q99576 134 aa13.05□□□□□ -0.32
CNOT4-203ENST00000361528 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.05□□□□□ -0.32
CNOT4-203ENST00000361528 MOV10L1Q9BXT6 1211 aaKnown RBP13.05□□□□□ -0.32
CNOT4-203ENST00000361528 RIPOR2Q9Y4F9 1068 aa13.05□□□□□ -0.32
CNOT4-203ENST00000361528 ABLIM1O14639 778 aa13.05□□□□□ -0.32
CNOT4-203ENST00000361528 GHRP10912 638 aa13.05□□□□□ -0.32
CNOT4-203ENST00000361528 AMPD2Q01433 879 aa13.05□□□□□ -0.32
CNOT4-203ENST00000361528 APBA1Q02410 837 aa13.05□□□□□ -0.32
CNOT4-203ENST00000361528 MTX1Q13505 466 aa13.05□□□□□ -0.32
CNOT4-203ENST00000361528 NECTIN1Q15223 517 aa13.05□□□□□ -0.32
CNOT4-203ENST00000361528 CFAP70Q5T0N1 1121 aa13.05□□□□□ -0.32
CNOT4-203ENST00000361528 RASGRP2Q7LDG7 609 aa13.05□□□□□ -0.32
CNOT4-203ENST00000361528 ATL2Q8NHH9 583 aa13.05□□□□□ -0.32
CNOT4-203ENST00000361528 BRF1Q92994 677 aa13.05□□□□□ -0.32
CNOT4-203ENST00000361528 FMNL2Q96PY5 1086 aa13.05□□□□□ -0.32
CNOT4-203ENST00000361528 NOD2Q9HC29 1040 aa13.05□□□□□ -0.32
CNOT4-203ENST00000361528 B4DLN1 442 aa13.04□□□□□ -0.32
CNOT4-203ENST00000361528 RANBP1P43487 201 aa13.04□□□□□ -0.32
CNOT4-203ENST00000361528 ME1P48163 572 aa13.04□□□□□ -0.32
CNOT4-203ENST00000361528 CKAP4Q07065 602 aaKnown RBP13.04□□□□□ -0.32
CNOT4-203ENST00000361528 IFT88Q13099 833 aa13.04□□□□□ -0.32
CNOT4-203ENST00000361528 ZRSR2Q15696 482 aaKnown RBP13.04□□□□□ -0.32
CNOT4-203ENST00000361528 PTGISQ16647 500 aa13.04□□□□□ -0.32
CNOT4-203ENST00000361528 CADPS2Q86UW7 1296 aa13.04□□□□□ -0.32
CNOT4-203ENST00000361528 TEX9Q8N6V9 391 aa13.04□□□□□ -0.32
CNOT4-203ENST00000361528 BICD1Q96G01 975 aa13.04□□□□□ -0.32
CNOT4-203ENST00000361528 YIPF3Q9GZM5 350 aa13.04□□□□□ -0.32
CNOT4-203ENST00000361528 LZTFL1Q9NQ48 299 aa13.04□□□□□ -0.32
CNOT4-203ENST00000361528 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.04□□□□□ -0.32
CNOT4-203ENST00000361528 PPP1R37O75864 691 aa13.04□□□□□ -0.32
CNOT4-203ENST00000361528 PDCLQ13371 301 aa13.04□□□□□ -0.32
CNOT4-203ENST00000361528 ANKRD20A8PQ5CZ79 823 aa13.04□□□□□ -0.32
CNOT4-203ENST00000361528 SPECC1Q5M775 1068 aa13.04□□□□□ -0.32
CNOT4-203ENST00000361528 NLRP14Q86W24 1093 aa13.04□□□□□ -0.32
CNOT4-203ENST00000361528 C1orf131Q8NDD1 294 aaKnown RBP13.04□□□□□ -0.32
CNOT4-203ENST00000361528 MYCBPAPQ8TBZ2 947 aa13.04□□□□□ -0.32
CNOT4-203ENST00000361528 AENQ8WTP8 325 aaKnown RBP13.04□□□□□ -0.32
CNOT4-203ENST00000361528 RBM41Q96IZ5 413 aaKnown RBP13.04□□□□□ -0.32
CNOT4-203ENST00000361528 GORASP1Q9BQQ3 440 aa13.04□□□□□ -0.32
CNOT4-203ENST00000361528 FANCLQ9NW38 375 aa13.04□□□□□ -0.32
CNOT4-203ENST00000361528 SBNO1A3KN83 1393 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 CARMIL2Q6F5E8 1435 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 RNF8O76064 485 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 PRKAR2BP31323 418 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 ATP8B2P98198 1209 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 ACCSLQ4AC99 568 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 ARMC3Q5W041 872 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 ARMC9Q7Z3E5 817 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 MYLK4Q86YV6 388 aaPredicted RBP13.03□□□□□ -0.32
CNOT4-203ENST00000361528 SLC35F6Q8N357 371 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 PDILTQ8N807 584 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 PI4K2BQ8TCG2 481 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 FBXW7Q969H0 707 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 CNKSR1Q969H4 720 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 CCT8L2Q96SF2 557 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 RUFY1Q96T51 708 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 LLPHQ9BRT6 129 aaKnown RBP13.03□□□□□ -0.32
CNOT4-203ENST00000361528 DESI2Q9BSY9 194 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 RABEP2Q9H5N1 569 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 HAUS2Q9NVX0 235 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 NOP53Q9NZM5 478 aaKnown RBP13.03□□□□□ -0.32
CNOT4-203ENST00000361528 UGGT1Q9NYU2 1555 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 TPP2P29144 1249 aaPredicted RBP13.03□□□□□ -0.32
CNOT4-203ENST00000361528 GOLGA8FQ08AF8 430 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 GOLGA8DPQ0D2H9 430 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 MYO1EQ12965 1108 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 CUL3Q13618 768 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 DBN1Q16643 649 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 RRP12Q5JTH9 1297 aaKnown RBP13.03□□□□□ -0.32
CNOT4-203ENST00000361528 CCDC70Q6NSX1 233 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 BLOC1S2Q6QNY1 142 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 RINLQ6ZS11 566 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 EHBP1Q8NDI1 1231 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 NUP58Q9BVL2 599 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 IQCGQ9H095 443 aaKnown RBP13.03□□□□□ -0.32
CNOT4-203ENST00000361528 RTEL1Q9NZ71 1219 aa13.03□□□□□ -0.32
CNOT4-203ENST00000361528 NEDD4P46934 1319 aa13.02□□□□□ -0.32
CNOT4-203ENST00000361528 PREX2Q70Z35 1606 aa13.02□□□□□ -0.33
CNOT4-203ENST00000361528 TMEM232C9JQI7 657 aa13.02□□□□□ -0.33
CNOT4-203ENST00000361528 AKR1B15C9JRZ8 316 aaPredicted RBP13.02□□□□□ -0.33
CNOT4-203ENST00000361528 ECEL1O95672 775 aa13.02□□□□□ -0.33
CNOT4-203ENST00000361528 LINGO3P0C6S8 592 aa13.02□□□□□ -0.33
CNOT4-203ENST00000361528 ALDH1B1P30837 517 aa13.02□□□□□ -0.33
CNOT4-203ENST00000361528 DYNC1I2Q13409 638 aaKnown RBP13.02□□□□□ -0.33
CNOT4-203ENST00000361528 CCDC178Q5BJE1 867 aa13.02□□□□□ -0.33
CNOT4-203ENST00000361528 IQCEQ6IPM2 695 aa13.02□□□□□ -0.33
CNOT4-203ENST00000361528 TBC1D31Q96DN5 1066 aa13.02□□□□□ -0.33
CNOT4-203ENST00000361528 SLX1AQ9BQ83 275 aa13.02□□□□□ -0.33
CNOT4-203ENST00000361528 SENP2Q9HC62 589 aa13.02□□□□□ -0.33
CNOT4-203ENST00000361528 ZFATQ9P243 1243 aa13.02□□□□□ -0.33
CNOT4-203ENST00000361528 FMNL1O95466 1100 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms