RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 URI1O94763 535 aaPredicted RBP12.63□□□□□ -0.39
FN1-204ENST00000356005 LTKP29376 864 aa12.63□□□□□ -0.39
FN1-204ENST00000356005 UVSSAQ2YD98 709 aa12.63□□□□□ -0.39
FN1-204ENST00000356005 RIOK1Q9BRS2 568 aaKnown RBP12.63□□□□□ -0.39
FN1-204ENST00000356005 AP5M1Q9H0R1 490 aa12.63□□□□□ -0.39
FN1-204ENST00000356005 ADD3Q9UEY8 706 aaKnown RBP12.63□□□□□ -0.39
FN1-204ENST00000356005 USH1GQ495M9 461 aa12.63□□□□□ -0.39
FN1-204ENST00000356005 CEP135Q66GS9 1140 aa12.63□□□□□ -0.39
FN1-204ENST00000356005 CCDC50Q8IVM0 306 aa12.63□□□□□ -0.39
FN1-204ENST00000356005 TMX3Q96JJ7 454 aa12.63□□□□□ -0.39
FN1-204ENST00000356005 PHACTR3Q96KR7 559 aa12.63□□□□□ -0.39
FN1-204ENST00000356005 PAGR1Q9BTK6 254 aa12.63□□□□□ -0.39
FN1-204ENST00000356005 FER1L4A9Z1Z3 1794 aa12.63□□□□□ -0.39
FN1-204ENST00000356005 IQGAP3Q86VI3 1631 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 UBE4AQ14139 1066 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 ANKRD35Q8N283 1001 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 GLG1Q92896 1179 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 LARP6Q9BRS8 491 aaKnown RBP12.62□□□□□ -0.39
FN1-204ENST00000356005 RNF216Q9NWF9 866 aaPredicted RBP12.62□□□□□ -0.39
FN1-204ENST00000356005 KIF5AQ12840 1032 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 ADPGKQ9BRR6 497 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 TAF5LO75529 589 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 TACC1O75410 805 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 CCDC175P0C221 793 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 ABCD1P33897 745 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 PDE4DQ08499 809 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 LIN9Q5TKA1 542 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 ZMYM4Q5VZL5 1548 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 NPR1P16066 1061 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 KIF11P52732 1056 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 CFAP58Q5T655 872 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 MICALCLQ6ZW33 695 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 AGTPBP1Q9UPW5 1226 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 DAPK3O43293 454 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 KRT86O43790 486 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 MARCKSP29966 332 aaPredicted RBP12.62□□□□□ -0.39
FN1-204ENST00000356005 DCAF17Q5H9S7 520 aaPredicted RBP12.62□□□□□ -0.39
FN1-204ENST00000356005 KBTBD3Q8NAB2 608 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 NAP1L3Q99457 506 aaPredicted RBP12.62□□□□□ -0.39
FN1-204ENST00000356005 KDRP35968 1356 aa12.62□□□□□ -0.39
FN1-204ENST00000356005 TTLL7Q6ZT98 887 aa12.61□□□□□ -0.39
FN1-204ENST00000356005 CCDC17Q96LX7 622 aa12.61□□□□□ -0.39
FN1-204ENST00000356005 MTUS1Q9ULD2 1270 aa12.61□□□□□ -0.39
FN1-204ENST00000356005 NEURL1BA8MQ27 555 aa12.61□□□□□ -0.39
FN1-204ENST00000356005 NSMFQ6X4W1 530 aa12.61□□□□□ -0.39
FN1-204ENST00000356005 CCDC94Q9BW85 323 aaPredicted RBP12.61□□□□□ -0.39
FN1-204ENST00000356005 SLFN12Q8IYM2 578 aa12.61□□□□□ -0.39
FN1-204ENST00000356005 NECAB1Q8N987 351 aa12.61□□□□□ -0.39
FN1-204ENST00000356005 NT5C3AQ9H0P0 336 aa12.61□□□□□ -0.39
FN1-204ENST00000356005 ATP6V0A2Q9Y487 856 aa12.61□□□□□ -0.39
FN1-204ENST00000356005 ELP1O95163 1332 aa12.61□□□□□ -0.39
FN1-204ENST00000356005 ZC3H13Q5T200 1668 aaKnown RBP12.61□□□□□ -0.39
FN1-204ENST00000356005 CRKLP46109 303 aaKnown RBP12.61□□□□□ -0.39
FN1-204ENST00000356005 ISM2Q6H9L7 571 aa12.61□□□□□ -0.39
FN1-204ENST00000356005 ZBTB8OSQ8IWT0 167 aa12.61□□□□□ -0.39
FN1-204ENST00000356005 REXO1Q8N1G1 1221 aaKnown RBP12.61□□□□□ -0.39
FN1-204ENST00000356005 PRPF6O94906 941 aaKnown RBP12.61□□□□□ -0.39
FN1-204ENST00000356005 CFBP00751 764 aa12.61□□□□□ -0.39
FN1-204ENST00000356005 METTL13Q8N6R0 699 aa12.61□□□□□ -0.39
FN1-204ENST00000356005 CCDC114Q96M63 670 aa12.61□□□□□ -0.39
FN1-204ENST00000356005 ZNF804BA4D1E1 1349 aa12.61□□□□□ -0.39
FN1-204ENST00000356005 ATF7P17544 494 aaPredicted RBP12.61□□□□□ -0.39
FN1-204ENST00000356005 APOBRQ0VD83 1088 aa12.61□□□□□ -0.39
FN1-204ENST00000356005 SPECC1LQ69YQ0 1117 aa12.61□□□□□ -0.39
FN1-204ENST00000356005 PKD2L1Q9P0L9 805 aa12.61□□□□□ -0.39
FN1-204ENST00000356005 B4E1Z4 1266 aa12.61□□□□□ -0.39
FN1-204ENST00000356005 CHL1O00533 1208 aa12.61□□□□□ -0.39
FN1-204ENST00000356005 ARID4AP29374 1257 aaPredicted RBP12.61□□□□□ -0.39
FN1-204ENST00000356005 JPH2Q9BR39 696 aaPredicted RBP12.61□□□□□ -0.39
FN1-204ENST00000356005 ARHGEF37A1IGU5 675 aa12.6□□□□□ -0.39
FN1-204ENST00000356005 CHMP2AO43633 222 aa12.6□□□□□ -0.39
FN1-204ENST00000356005 FAM160B1Q5W0V3 765 aa12.6□□□□□ -0.39
FN1-204ENST00000356005 ABI1Q8IZP0 508 aa12.6□□□□□ -0.39
FN1-204ENST00000356005 GSDMBQ8TAX9 411 aa12.6□□□□□ -0.39
FN1-204ENST00000356005 ZNF496Q96IT1 587 aaPredicted RBP12.6□□□□□ -0.39
FN1-204ENST00000356005 HAUS7Q99871 368 aa12.6□□□□□ -0.39
FN1-204ENST00000356005 MAGI3Q5TCQ9 1506 aa12.6□□□□□ -0.39
FN1-204ENST00000356005 GAS7O60861 476 aa12.6□□□□□ -0.39
FN1-204ENST00000356005 RBM6P78332 1123 aaKnown RBP12.6□□□□□ -0.39
FN1-204ENST00000356005 PLCB3Q01970 1234 aa12.6□□□□□ -0.39
FN1-204ENST00000356005 C6orf163Q5TEZ5 329 aa12.6□□□□□ -0.39
FN1-204ENST00000356005 TESK2Q96S53 571 aa12.6□□□□□ -0.39
FN1-204ENST00000356005 LGR6Q9HBX8 967 aa12.6□□□□□ -0.39
FN1-204ENST00000356005 HARSP12081 509 aaKnown RBP12.6□□□□□ -0.39
FN1-204ENST00000356005 SLC27A3Q5K4L6 730 aa12.6□□□□□ -0.39
FN1-204ENST00000356005 ZKSCAN3Q9BRR0 538 aa12.6□□□□□ -0.39
FN1-204ENST00000356005 VWA3AA6NCI4 1184 aa12.6□□□□□ -0.39
FN1-204ENST00000356005 FAM169AQ9Y6X4 670 aa12.6□□□□□ -0.39
FN1-204ENST00000356005 ZNF532Q9HCE3 1301 aa12.6□□□□□ -0.39
FN1-204ENST00000356005 BCRP11274 1271 aa12.6□□□□□ -0.39
FN1-204ENST00000356005 CALRP27797 417 aaKnown RBP12.6□□□□□ -0.39
FN1-204ENST00000356005 TTLL6Q8N841 843 aa12.6□□□□□ -0.39
FN1-204ENST00000356005 SLC17A8Q8NDX2 589 aa12.6□□□□□ -0.39
FN1-204ENST00000356005 INTS4Q96HW7 963 aaKnown RBP12.6□□□□□ -0.39
FN1-204ENST00000356005 ATP8A2Q9NTI2 1148 aa12.6□□□□□ -0.39
FN1-204ENST00000356005 CAMSAP1Q5T5Y3 1602 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 GOLGA6CA6NDK9 693 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 GOLGA6BA6NDN3 693 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 GOLGA6DP0CG33 693 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 YARSP54577 528 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms