RNA–Protein interactions for RNA: ENST00000312295.4

RTP1-201, Transcript of receptor transporter protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP1, Length 2,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1-201ENST00000312295 PDCP20941 246 aa17.74■□□□□ 0.43
RTP1-201ENST00000312295 PLCD1P51178 756 aa17.74■□□□□ 0.43
RTP1-201ENST00000312295 SART3Q15020 963 aaKnown RBP17.74■□□□□ 0.43
RTP1-201ENST00000312295 PHKBQ93100 1093 aa17.74■□□□□ 0.43
RTP1-201ENST00000312295 LLPHQ9BRT6 129 aaKnown RBP17.74■□□□□ 0.43
RTP1-201ENST00000312295 DDX49Q9Y6V7 483 aaKnown RBP17.74■□□□□ 0.43
RTP1-201ENST00000312295 GAKO14976 1311 aa17.73■□□□□ 0.43
RTP1-201ENST00000312295 UBE2Q2LH0YL09 131 aa17.73■□□□□ 0.43
RTP1-201ENST00000312295 PPP4CP60510 307 aa17.73■□□□□ 0.43
RTP1-201ENST00000312295 OTUD7BQ6GQQ9 843 aa17.73■□□□□ 0.43
RTP1-201ENST00000312295 CMTR1Q8N1G2 835 aaKnown RBP17.73■□□□□ 0.43
RTP1-201ENST00000312295 NUP133Q8WUM0 1156 aa17.73■□□□□ 0.43
RTP1-201ENST00000312295 POLR3DP05423 398 aaPredicted RBP17.72■□□□□ 0.43
RTP1-201ENST00000312295 CCDC125Q86Z20 511 aa17.72■□□□□ 0.43
RTP1-201ENST00000312295 ENAHQ8N8S7 591 aaPredicted RBP17.72■□□□□ 0.43
RTP1-201ENST00000312295 CHMP4CQ96CF2 233 aa17.72■□□□□ 0.43
RTP1-201ENST00000312295 ZNF277Q9NRM2 450 aaPredicted RBP17.72■□□□□ 0.43
RTP1-201ENST00000312295 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.72■□□□□ 0.43
RTP1-201ENST00000312295 DDX60LQ5H9U9 1706 aaKnown RBP17.72■□□□□ 0.43
RTP1-201ENST00000312295 GSE1Q14687 1217 aa17.72■□□□□ 0.43
RTP1-201ENST00000312295 C12orf60Q5U649 245 aa17.72■□□□□ 0.43
RTP1-201ENST00000312295 PODNQ7Z5L7 613 aa17.72■□□□□ 0.43
RTP1-201ENST00000312295 SGMS1Q86VZ5 419 aa17.72■□□□□ 0.43
RTP1-201ENST00000312295 CCDC82Q8N4S0 544 aa17.72■□□□□ 0.43
RTP1-201ENST00000312295 AIFM3Q96NN9 605 aa17.72■□□□□ 0.43
RTP1-201ENST00000312295 COL4A5P29400 1685 aa17.71■□□□□ 0.43
RTP1-201ENST00000312295 LIFRP42702 1097 aa17.71■□□□□ 0.43
RTP1-201ENST00000312295 HMGN5P82970 282 aaKnown RBP17.71■□□□□ 0.43
RTP1-201ENST00000312295 TMED8Q6PL24 325 aaPredicted RBP17.71■□□□□ 0.43
RTP1-201ENST00000312295 ZSCAN10Q96SZ4 725 aaPredicted RBP17.71■□□□□ 0.43
RTP1-201ENST00000312295 ZNF646O15015 1829 aaPredicted RBP17.71■□□□□ 0.43
RTP1-201ENST00000312295 ECM29Q5VYK3 1845 aa17.71■□□□□ 0.43
RTP1-201ENST00000312295 TSPY2A6NKD2 308 aa17.71■□□□□ 0.43
RTP1-201ENST00000312295 YDJCA8MPS7 323 aa17.71■□□□□ 0.43
RTP1-201ENST00000312295 GADD45BO75293 160 aaPredicted RBP17.71■□□□□ 0.43
RTP1-201ENST00000312295 CACNB3P54284 484 aa17.71■□□□□ 0.43
RTP1-201ENST00000312295 KIAA2012Q0VF49 1180 aa17.71■□□□□ 0.43
RTP1-201ENST00000312295 SBK1Q52WX2 424 aa17.71■□□□□ 0.43
RTP1-201ENST00000312295 CCDC93Q567U6 631 aa17.71■□□□□ 0.43
RTP1-201ENST00000312295 SLF2Q8IX21 1173 aa17.71■□□□□ 0.43
RTP1-201ENST00000312295 GPT2Q8TD30 523 aa17.71■□□□□ 0.43
RTP1-201ENST00000312295 ORC3Q9UBD5 711 aaPredicted RBP17.71■□□□□ 0.43
RTP1-201ENST00000312295 SLC3A2P08195 630 aaKnown RBP17.7■□□□□ 0.42
RTP1-201ENST00000312295 POLD1P28340 1107 aa17.7■□□□□ 0.42
RTP1-201ENST00000312295 PDE4BQ07343 736 aa17.7■□□□□ 0.42
RTP1-201ENST00000312295 SEC23AQ15436 765 aa17.7■□□□□ 0.42
RTP1-201ENST00000312295 DACT2Q5SW24 774 aa17.7■□□□□ 0.42
RTP1-201ENST00000312295 USP48Q86UV5 1035 aa17.7■□□□□ 0.42
RTP1-201ENST00000312295 ZNF654Q8IZM8 581 aa17.7■□□□□ 0.42
RTP1-201ENST00000312295 MTFR1LQ9H019 292 aa17.7■□□□□ 0.42
RTP1-201ENST00000312295 DDX4Q9NQI0 724 aaKnown RBP17.7■□□□□ 0.42
RTP1-201ENST00000312295 FAM217BQ9NTX9 383 aaPredicted RBP17.7■□□□□ 0.42
RTP1-201ENST00000312295 KIF13BQ9NQT8 1826 aa17.7■□□□□ 0.42
RTP1-201ENST00000312295 RBM5P52756 815 aaKnown RBP eCLIP17.7■□□□□ 0.42
RTP1-201ENST00000312295 IFIT1BQ5T764 474 aaKnown RBP17.7■□□□□ 0.42
RTP1-201ENST00000312295 RBM27Q9P2N5 1060 aaKnown RBP17.7■□□□□ 0.42
RTP1-201ENST00000312295 DHX16O60231 1041 aaKnown RBP17.69■□□□□ 0.42
RTP1-201ENST00000312295 IQCA1Q86XH1 822 aa17.69■□□□□ 0.42
RTP1-201ENST00000312295 AMOTL1Q8IY63 956 aa17.69■□□□□ 0.42
RTP1-201ENST00000312295 USP17L3A6NCW0 530 aa17.68■□□□□ 0.42
RTP1-201ENST00000312295 USP17L4A6NCW7 530 aa17.68■□□□□ 0.42
RTP1-201ENST00000312295 FGRP09769 529 aa17.68■□□□□ 0.42
RTP1-201ENST00000312295 CRKP46108 304 aa17.68■□□□□ 0.42
RTP1-201ENST00000312295 CAVIN1Q6NZI2 390 aaKnown RBP17.68■□□□□ 0.42
RTP1-201ENST00000312295 SYNE3Q6ZMZ3 975 aa17.68■□□□□ 0.42
RTP1-201ENST00000312295 USP17L1Q7RTZ2 530 aa17.68■□□□□ 0.42
RTP1-201ENST00000312295 TEKT1Q969V4 418 aa17.68■□□□□ 0.42
RTP1-201ENST00000312295 FAM163AQ96GL9 167 aaPredicted RBP17.68■□□□□ 0.42
RTP1-201ENST00000312295 MKNK2Q9HBH9 465 aa17.68■□□□□ 0.42
RTP1-201ENST00000312295 USP40Q9NVE5 1235 aa17.68■□□□□ 0.42
RTP1-201ENST00000312295 MYH1P12882 1939 aa17.68■□□□□ 0.42
RTP1-201ENST00000312295 ORC4O43929 436 aa17.68■□□□□ 0.42
RTP1-201ENST00000312295 RAD17O75943 681 aa17.68■□□□□ 0.42
RTP1-201ENST00000312295 SLURP2P0DP57 97 aa17.68■□□□□ 0.42
RTP1-201ENST00000312295 PLCG2P16885 1265 aa17.68■□□□□ 0.42
RTP1-201ENST00000312295 STRIP1Q5VSL9 837 aa17.68■□□□□ 0.42
RTP1-201ENST00000312295 FOCADQ5VW36 1801 aa17.67■□□□□ 0.42
RTP1-201ENST00000312295 WDHD1O75717 1129 aaPredicted RBP17.67■□□□□ 0.42
RTP1-201ENST00000312295 TFAP4Q01664 338 aa17.67■□□□□ 0.42
RTP1-201ENST00000312295 NFIAQ12857 509 aa17.67■□□□□ 0.42
RTP1-201ENST00000312295 RESTQ13127 1097 aa17.67■□□□□ 0.42
RTP1-201ENST00000312295 RTN1Q16799 776 aa17.67■□□□□ 0.42
RTP1-201ENST00000312295 LARGE2Q8N3Y3 721 aa17.67■□□□□ 0.42
RTP1-201ENST00000312295 UPF1Q92900 1129 aaKnown RBP eCLIP17.67■□□□□ 0.42
RTP1-201ENST00000312295 SLC26A6Q9BXS9 759 aa17.67■□□□□ 0.42
RTP1-201ENST00000312295 TFIP11Q9UBB9 837 aaKnown RBP17.67■□□□□ 0.42
RTP1-201ENST00000312295 MTMR7Q9Y216 660 aa17.67■□□□□ 0.42
RTP1-201ENST00000312295 ATP6V1DQ9Y5K8 247 aa17.67■□□□□ 0.42
RTP1-201ENST00000312295 ROBO3Q96MS0 1386 aa17.67■□□□□ 0.42
RTP1-201ENST00000312295 APOBEC3HQ6NTF7 200 aaKnown RBP17.67■□□□□ 0.42
RTP1-201ENST00000312295 CDC42EP5Q6NZY7 148 aa17.67■□□□□ 0.42
RTP1-201ENST00000312295 FTOQ9C0B1 505 aaKnown RBP eCLIP17.67■□□□□ 0.42
RTP1-201ENST00000312295 SUGT1Q9Y2Z0 365 aa17.67■□□□□ 0.42
RTP1-201ENST00000312295 PTMSP20962 102 aa17.66■□□□□ 0.42
RTP1-201ENST00000312295 CEBPZQ03701 1054 aaKnown RBP17.66■□□□□ 0.42
RTP1-201ENST00000312295 NTRK3Q16288 839 aa17.66■□□□□ 0.42
RTP1-201ENST00000312295 KLHL40Q2TBA0 621 aa17.66■□□□□ 0.42
RTP1-201ENST00000312295 CC2D2BQ6DHV5 1058 aa17.66■□□□□ 0.42
RTP1-201ENST00000312295 SUPT20HQ8NEM7 779 aa17.66■□□□□ 0.42
RTP1-201ENST00000312295 C8orf76Q96K31 380 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms