RNA–Protein interactions for RNA: ENST00000311895.7

ERCC4-201, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC4, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-201ENST00000311895 TTC38Q5R3I4 469 aa9.51□□□□□ -0.89
ERCC4-201ENST00000311895 GKAP1Q5VSY0 366 aaPredicted RBP9.51□□□□□ -0.89
ERCC4-201ENST00000311895 NELFBQ8WX92 580 aa9.51□□□□□ -0.89
ERCC4-201ENST00000311895 NOX5Q96PH1 765 aa9.51□□□□□ -0.89
ERCC4-201ENST00000311895 WDR70Q9NW82 654 aa9.51□□□□□ -0.89
ERCC4-201ENST00000311895 CIB2O75838 187 aa9.51□□□□□ -0.89
ERCC4-201ENST00000311895 WDR44Q5JSH3 913 aa9.51□□□□□ -0.89
ERCC4-201ENST00000311895 TYW1BQ6NUM6 668 aa9.51□□□□□ -0.89
ERCC4-201ENST00000311895 PNMA8AQ86V59 439 aaPredicted RBP9.51□□□□□ -0.89
ERCC4-201ENST00000311895 FMNL3Q8IVF7 1028 aa9.51□□□□□ -0.89
ERCC4-201ENST00000311895 IFT20Q8IY31 132 aa9.51□□□□□ -0.89
ERCC4-201ENST00000311895 TEX11Q8IYF3 940 aa9.51□□□□□ -0.89
ERCC4-201ENST00000311895 RAD50Q92878 1312 aa9.51□□□□□ -0.89
ERCC4-201ENST00000311895 C8orf37Q96NL8 207 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 DESI2Q9BSY9 194 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 A0A1W2PP64 1363 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 GUCY2FP51841 1108 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 ZNF445P59923 1031 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 ATL3Q6DD88 541 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 TPTE2Q6XPS3 522 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 SND1Q7KZF4 910 aaKnown RBP eCLIP9.5□□□□□ -0.89
ERCC4-201ENST00000311895 XPO4Q9C0E2 1151 aaKnown RBP9.5□□□□□ -0.89
ERCC4-201ENST00000311895 MYO1AQ9UBC5 1043 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 SGSM2O43147 1006 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 PKP1Q13835 747 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 DDB1Q16531 1140 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 USH1GQ495M9 461 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 GPR161Q8N6U8 529 aaKnown RBP9.5□□□□□ -0.89
ERCC4-201ENST00000311895 PPFIBP2Q8ND30 876 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 BCL2L12Q9HB09 334 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 TFCP2L1Q9NZI6 479 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 NOL3O60936 208 aaKnown RBP9.5□□□□□ -0.89
ERCC4-201ENST00000311895 NR1I2O75469 434 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 LRMPQ12912 555 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 NEDD9Q14511 834 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 TESK2Q96S53 571 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 FAM207AQ9NSI2 230 aaPredicted RBP9.5□□□□□ -0.89
ERCC4-201ENST00000311895 VPS54Q9P1Q0 977 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 ASIC3Q9UHC3 531 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 IL2RBP14784 551 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 LGR6Q9HBX8 967 aa9.5□□□□□ -0.89
ERCC4-201ENST00000311895 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.5□□□□□ -0.89
ERCC4-201ENST00000311895 CUTAO60888 179 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 HOXC9P31274 260 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 CLNS1AP54105 237 aaKnown RBP9.49□□□□□ -0.89
ERCC4-201ENST00000311895 ME3Q16798 604 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 KIFAP3Q92845 792 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 SUCLG2Q96I99 432 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 NYXQ9GZU5 481 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 NLRC4Q9NPP4 1024 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 PLCH2O75038 1416 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 SH3BP5O60239 455 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 NCBP1Q09161 790 aaKnown RBP9.49□□□□□ -0.89
ERCC4-201ENST00000311895 TRAF1Q13077 416 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 ZNF365Q70YC5 407 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 RDH13Q8NBN7 331 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 CLEC11AQ9Y240 323 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 ABCC1P33527 1531 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 FLT4P35916 1363 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 KDM2BQ8NHM5 1336 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 ZWINTO95229 277 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 GINS2Q9Y248 185 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 STK38LQ9Y2H1 464 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 ACTN4O43707 911 aaKnown RBP9.49□□□□□ -0.89
ERCC4-201ENST00000311895 TRIM14Q14142 442 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 RPUSD2Q8IZ73 545 aaKnown RBP9.49□□□□□ -0.89
ERCC4-201ENST00000311895 FAM204AQ9H8W3 233 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 CTTNBP2NLQ9P2B4 639 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 USP19O94966 1318 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 EYA2O00167 538 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 STX10O60499 249 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 COBLO75128 1261 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 ALDH3A1P30838 453 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 MAGEA1P43355 309 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 HERC4Q5GLZ8 1057 aaPredicted RBP9.49□□□□□ -0.89
ERCC4-201ENST00000311895 CADPS2Q86UW7 1296 aa9.49□□□□□ -0.89
ERCC4-201ENST00000311895 CALUO43852 315 aaPredicted RBP9.48□□□□□ -0.89
ERCC4-201ENST00000311895 CRCPO75575 148 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 TUBBP07437 444 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 MYCLP12524 364 aaPredicted RBP9.48□□□□□ -0.89
ERCC4-201ENST00000311895 FYB2Q5VWT5 728 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 KRT40Q6A162 431 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 VPS52Q8N1B4 723 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 SNX29Q8TEQ0 813 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 SWAP70Q9UH65 585 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 RTCBQ9Y3I0 505 aaKnown RBP9.48□□□□□ -0.89
ERCC4-201ENST00000311895 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.48□□□□□ -0.89
ERCC4-201ENST00000311895 RNF123Q5XPI4 1314 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 GCNT3O95395 438 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 PLCG2P16885 1265 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 ATP5DP30049 168 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 SNX16P57768 344 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 CLUL1Q15846 466 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 ARHGAP44Q17R89 818 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 SLC9C1Q4G0N8 1177 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 FAM47AQ5JRC9 791 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 RRAGAQ7L523 313 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 MSANTD4Q8NCY6 345 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 EPSTI1Q96J88 318 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 TMEM87BQ96K49 555 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms