RNA–Protein interactions for RNA: ENST00000294161.10

TTC9C-201, Transcript of tetratricopeptide repeat domain 9C, humanhuman

TSL 1 (best)

Gene TTC9C, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-201ENST00000294161 NT5C2P49902 561 aa17.12■□□□□ 0.33
TTC9C-201ENST00000294161 RTN1Q16799 776 aa17.12■□□□□ 0.33
TTC9C-201ENST00000294161 OTUD7BQ6GQQ9 843 aa17.12■□□□□ 0.33
TTC9C-201ENST00000294161 FTOQ9C0B1 505 aaKnown RBP eCLIP17.12■□□□□ 0.33
TTC9C-201ENST00000294161 IQSEC3Q9UPP2 1182 aaPredicted RBP17.12■□□□□ 0.33
TTC9C-201ENST00000294161 SLC3A2P08195 630 aaKnown RBP17.12■□□□□ 0.33
TTC9C-201ENST00000294161 SNW1Q13573 536 aaKnown RBP17.12■□□□□ 0.33
TTC9C-201ENST00000294161 NTRK3Q16288 839 aa17.12■□□□□ 0.33
TTC9C-201ENST00000294161 PRR5LQ6MZQ0 368 aa17.12■□□□□ 0.33
TTC9C-201ENST00000294161 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.12■□□□□ 0.33
TTC9C-201ENST00000294161 CLIC4Q9Y696 253 aa17.12■□□□□ 0.33
TTC9C-201ENST00000294161 MINDY4BA8MYZ0 360 aa17.11■□□□□ 0.33
TTC9C-201ENST00000294161 SOCS7O14512 581 aa17.11■□□□□ 0.33
TTC9C-201ENST00000294161 SLC39A14Q15043 492 aa17.11■□□□□ 0.33
TTC9C-201ENST00000294161 FMR1NBQ8N0W7 255 aaPredicted RBP17.11■□□□□ 0.33
TTC9C-201ENST00000294161 SDF4Q9BRK5 362 aa17.11■□□□□ 0.33
TTC9C-201ENST00000294161 RIOK1Q9BRS2 568 aaKnown RBP17.11■□□□□ 0.33
TTC9C-201ENST00000294161 SLC26A6Q9BXS9 759 aa17.11■□□□□ 0.33
TTC9C-201ENST00000294161 GOLPH3LQ9H4A5 285 aa17.11■□□□□ 0.33
TTC9C-201ENST00000294161 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.11■□□□□ 0.33
TTC9C-201ENST00000294161 PPP6R2O75170 966 aa17.1■□□□□ 0.33
TTC9C-201ENST00000294161 CMA1P23946 247 aa17.1■□□□□ 0.33
TTC9C-201ENST00000294161 U2AF2P26368 475 aaKnown RBP eCLIP17.1■□□□□ 0.332e-6■■■■■ 28.6
TTC9C-201ENST00000294161 TERF1P54274 439 aa17.1■□□□□ 0.33
TTC9C-201ENST00000294161 CRNKL1Q9BZJ0 848 aaKnown RBP17.1■□□□□ 0.33
TTC9C-201ENST00000294161 DEXIO95424 95 aa17.1■□□□□ 0.33
TTC9C-201ENST00000294161 CALM1P0DP23 149 aa17.1■□□□□ 0.33
TTC9C-201ENST00000294161 CALM2P0DP24 149 aa17.1■□□□□ 0.33
TTC9C-201ENST00000294161 CALM3P0DP25 149 aa17.1■□□□□ 0.33
TTC9C-201ENST00000294161 LUZP1Q86V48 1076 aa17.1■□□□□ 0.33
TTC9C-201ENST00000294161 CNBD1Q8NA66 436 aa17.1■□□□□ 0.33
TTC9C-201ENST00000294161 PHKBQ93100 1093 aa17.1■□□□□ 0.33
TTC9C-201ENST00000294161 FAM217BQ9NTX9 383 aaPredicted RBP17.1■□□□□ 0.33
TTC9C-201ENST00000294161 XBP1P17861 261 aa17.09■□□□□ 0.33
TTC9C-201ENST00000294161 RXRAP19793 462 aa17.09■□□□□ 0.33
TTC9C-201ENST00000294161 AKAP17AQ02040 695 aaKnown RBP17.09■□□□□ 0.33
TTC9C-201ENST00000294161 IQCA1Q86XH1 822 aa17.09■□□□□ 0.33
TTC9C-201ENST00000294161 CCDC144CPQ8IYA2 1237 aa17.09■□□□□ 0.33
TTC9C-201ENST00000294161 CEP57L1Q8IYX8 460 aa17.09■□□□□ 0.33
TTC9C-201ENST00000294161 DNAJC25Q9H1X3 360 aa17.09■□□□□ 0.33
TTC9C-201ENST00000294161 SENP2Q9HC62 589 aa17.09■□□□□ 0.33
TTC9C-201ENST00000294161 INCENPQ9NQS7 918 aa17.09■□□□□ 0.33
TTC9C-201ENST00000294161 ATP8A2Q9NTI2 1148 aa17.09■□□□□ 0.33
TTC9C-201ENST00000294161 LEMD3Q9Y2U8 911 aa17.09■□□□□ 0.33
TTC9C-201ENST00000294161 PARP3Q9Y6F1 533 aa17.09■□□□□ 0.33
TTC9C-201ENST00000294161 COL4A1P02462 1669 aa17.09■□□□□ 0.33
TTC9C-201ENST00000294161 TAF1P21675 1872 aa17.08■□□□□ 0.33
TTC9C-201ENST00000294161 KIF28PB7ZC32 967 aa17.08■□□□□ 0.33
TTC9C-201ENST00000294161 ADGRA1Q86SQ6 560 aa17.08■□□□□ 0.33
TTC9C-201ENST00000294161 ZNF654Q8IZM8 581 aa17.08■□□□□ 0.33
TTC9C-201ENST00000294161 FANCBQ8NB91 859 aa17.08■□□□□ 0.33
TTC9C-201ENST00000294161 TIGD1Q96MW7 591 aa17.08■□□□□ 0.33
TTC9C-201ENST00000294161 ANKRD31Q8N7Z5 1873 aa17.08■□□□□ 0.32
TTC9C-201ENST00000294161 COL1A1P02452 1464 aaPredicted RBP17.08■□□□□ 0.32
TTC9C-201ENST00000294161 BECN2A8MW95 431 aa17.07■□□□□ 0.32
TTC9C-201ENST00000294161 RANBP6O60518 1105 aaKnown RBP17.07■□□□□ 0.32
TTC9C-201ENST00000294161 TPM2P07951 284 aa17.07■□□□□ 0.32
TTC9C-201ENST00000294161 SDR42E1Q8WUS8 393 aa17.07■□□□□ 0.32
TTC9C-201ENST00000294161 NSUN4Q96CB9 384 aaKnown RBP17.07■□□□□ 0.32
TTC9C-201ENST00000294161 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.07■□□□□ 0.32
TTC9C-201ENST00000294161 RBM28Q9NW13 759 aaKnown RBP17.07■□□□□ 0.32
TTC9C-201ENST00000294161 NRXN2Q9P2S2 1712 aa17.07■□□□□ 0.32
TTC9C-201ENST00000294161 CATIPQ7Z7H3 387 aa17.07■□□□□ 0.32
TTC9C-201ENST00000294161 CRACR2BQ8N4Y2 399 aaPredicted RBP17.07■□□□□ 0.32
TTC9C-201ENST00000294161 ZSCAN10Q96SZ4 725 aaPredicted RBP17.07■□□□□ 0.32
TTC9C-201ENST00000294161 MYL10Q9BUA6 226 aa17.07■□□□□ 0.32
TTC9C-201ENST00000294161 TRIM5Q9C035 493 aa17.07■□□□□ 0.32
TTC9C-201ENST00000294161 FOXP1Q9H334 677 aaPredicted RBP17.07■□□□□ 0.32
TTC9C-201ENST00000294161 TACC3Q9Y6A5 838 aa17.07■□□□□ 0.32
TTC9C-201ENST00000294161 CACNA1SQ13698 1873 aa17.06■□□□□ 0.32
TTC9C-201ENST00000294161 TNKSO95271 1327 aa17.06■□□□□ 0.32
TTC9C-201ENST00000294161 A0A1B0GVL5 298 aa17.06■□□□□ 0.32
TTC9C-201ENST00000294161 CUTAO60888 179 aa17.06■□□□□ 0.32
TTC9C-201ENST00000294161 FGRP09769 529 aa17.06■□□□□ 0.32
TTC9C-201ENST00000294161 CDC25BP30305 580 aa17.06■□□□□ 0.32
TTC9C-201ENST00000294161 NDUFA8P51970 172 aa17.06■□□□□ 0.32
TTC9C-201ENST00000294161 GSTO1P78417 241 aa17.06■□□□□ 0.32
TTC9C-201ENST00000294161 MECOMQ03112 1051 aa17.06■□□□□ 0.32
TTC9C-201ENST00000294161 GRAPQ13588 217 aa17.06■□□□□ 0.32
TTC9C-201ENST00000294161 SLC51AQ86UW1 340 aa17.06■□□□□ 0.32
TTC9C-201ENST00000294161 NKX2-3Q8TAU0 364 aa17.06■□□□□ 0.32
TTC9C-201ENST00000294161 WDR66Q8TBY9 1149 aa17.06■□□□□ 0.32
TTC9C-201ENST00000294161 GRAPLQ8TC17 118 aaPredicted RBP17.06■□□□□ 0.32
TTC9C-201ENST00000294161 RNF26Q9BY78 433 aaPredicted RBP17.06■□□□□ 0.32
TTC9C-201ENST00000294161 MTFR1LQ9H019 292 aa17.06■□□□□ 0.32
TTC9C-201ENST00000294161 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.06■□□□□ 0.32
TTC9C-201ENST00000294161 ARPP21Q9UBL0 812 aaPredicted RBP17.06■□□□□ 0.32
TTC9C-201ENST00000294161 ORC4O43929 436 aa17.05■□□□□ 0.32
TTC9C-201ENST00000294161 MMP1P03956 469 aa17.05■□□□□ 0.32
TTC9C-201ENST00000294161 ZNF75DP51815 510 aa17.05■□□□□ 0.32
TTC9C-201ENST00000294161 DYNLL1P63167 89 aaKnown RBP17.05■□□□□ 0.32
TTC9C-201ENST00000294161 SEC23AQ15436 765 aa17.05■□□□□ 0.32
TTC9C-201ENST00000294161 RILPL1Q5EBL4 403 aa17.05■□□□□ 0.32
TTC9C-201ENST00000294161 SARM1Q6SZW1 724 aa17.05■□□□□ 0.32
TTC9C-201ENST00000294161 NOSTRINQ8IVI9 506 aa17.05■□□□□ 0.32
TTC9C-201ENST00000294161 DRC7Q8IY82 874 aa17.05■□□□□ 0.32
TTC9C-201ENST00000294161 SLC16A10Q8TF71 515 aa17.05■□□□□ 0.32
TTC9C-201ENST00000294161 PIBF1Q8WXW3 757 aa17.05■□□□□ 0.32
TTC9C-201ENST00000294161 AIFM3Q96NN9 605 aa17.05■□□□□ 0.32
TTC9C-201ENST00000294161 ZKSCAN3Q9BRR0 538 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms