RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 IQCB1Q15051 598 aa25.12■■□□□ 1.61
CLN6-201ENST00000249806 STX1AQ16623 288 aa25.12■■□□□ 1.61
CLN6-201ENST00000249806 NBPF11Q86T75 865 aa25.12■■□□□ 1.61
CLN6-201ENST00000249806 USP17L12C9JPN9 530 aa25.11■■□□□ 1.61
CLN6-201ENST00000249806 USP17L21D6R901 530 aa25.11■■□□□ 1.61
CLN6-201ENST00000249806 CRACR2BQ8N4Y2 399 aaPredicted RBP25.11■■□□□ 1.61
CLN6-201ENST00000249806 SBF2Q86WG5 1849 aa25.11■■□□□ 1.61
CLN6-201ENST00000249806 TNRC6CQ9HCJ0 1690 aaKnown RBP25.11■■□□□ 1.61
CLN6-201ENST00000249806 KIAA2012Q0VF49 1180 aa25.1■■□□□ 1.61
CLN6-201ENST00000249806 FBXW7Q969H0 707 aa25.1■■□□□ 1.61
CLN6-201ENST00000249806 KCNJ14Q9UNX9 436 aa25.1■■□□□ 1.61
CLN6-201ENST00000249806 CAVIN2O95810 425 aa25.1■■□□□ 1.61
CLN6-201ENST00000249806 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.1■■□□□ 1.61
CLN6-201ENST00000249806 TRIM22Q8IYM9 498 aa25.1■■□□□ 1.61
CLN6-201ENST00000249806 ENAHQ8N8S7 591 aaPredicted RBP25.1■■□□□ 1.61
CLN6-201ENST00000249806 MAP3K14Q99558 947 aa25.1■■□□□ 1.61
CLN6-201ENST00000249806 BTBD18B2RXH4 712 aa25.09■■□□□ 1.61
CLN6-201ENST00000249806 PTPAQ15257 358 aa25.09■■□□□ 1.61
CLN6-201ENST00000249806 TRIM5Q9C035 493 aa25.09■■□□□ 1.61
CLN6-201ENST00000249806 ZNF202O95125 648 aa25.09■■□□□ 1.61
CLN6-201ENST00000249806 CMA1P23946 247 aa25.09■■□□□ 1.61
CLN6-201ENST00000249806 WASF1Q92558 559 aa25.09■■□□□ 1.61
CLN6-201ENST00000249806 ZSCAN10Q96SZ4 725 aaPredicted RBP25.09■■□□□ 1.61
CLN6-201ENST00000249806 ANKIB1Q9P2G1 1089 aa25.09■■□□□ 1.61
CLN6-201ENST00000249806 MROH7-TTC4A0A0A0MT08 1334 aa25.08■■□□□ 1.61
CLN6-201ENST00000249806 AFF2P51816 1311 aa25.08■■□□□ 1.61
CLN6-201ENST00000249806 IRS2Q9Y4H2 1338 aa25.08■■□□□ 1.61
CLN6-201ENST00000249806 PFKFB1P16118 471 aa25.08■■□□□ 1.61
CLN6-201ENST00000249806 PDS5AQ29RF7 1337 aaKnown RBP25.08■■□□□ 1.61
CLN6-201ENST00000249806 CCDC196A0A1B0GTZ2 297 aa25.08■■□□□ 1.6
CLN6-201ENST00000249806 MMP1P03956 469 aa25.08■■□□□ 1.6
CLN6-201ENST00000249806 SEPT12Q8IYM1 358 aa25.08■■□□□ 1.6
CLN6-201ENST00000249806 KCNF1Q9H3M0 494 aa25.08■■□□□ 1.6
CLN6-201ENST00000249806 PLA2G4DQ86XP0 818 aa25.07■■□□□ 1.6
CLN6-201ENST00000249806 C17orf53Q8N3J3 647 aaPredicted RBP25.07■■□□□ 1.6
CLN6-201ENST00000249806 DCP1AQ9NPI6 582 aaPredicted RBP25.07■■□□□ 1.6
CLN6-201ENST00000249806 ANO10Q9NW15 660 aa25.07■■□□□ 1.6
CLN6-201ENST00000249806 DUOX1Q9NRD9 1551 aa25.07■■□□□ 1.6
CLN6-201ENST00000249806 ZNF75DP51815 510 aa25.06■■□□□ 1.6
CLN6-201ENST00000249806 NOSTRINQ8IVI9 506 aa25.06■■□□□ 1.6
CLN6-201ENST00000249806 DIS3L2Q8IYB7 885 aaKnown RBP25.06■■□□□ 1.6
CLN6-201ENST00000249806 CNBD1Q8NA66 436 aa25.06■■□□□ 1.6
CLN6-201ENST00000249806 CLIC6Q96NY7 704 aa25.06■■□□□ 1.6
CLN6-201ENST00000249806 KIAA1468Q9P260 1216 aa25.06■■□□□ 1.6
CLN6-201ENST00000249806 PPP6R2O75170 966 aa25.06■■□□□ 1.6
CLN6-201ENST00000249806 DEXIO95424 95 aa25.06■■□□□ 1.6
CLN6-201ENST00000249806 FGRP09769 529 aa25.06■■□□□ 1.6
CLN6-201ENST00000249806 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.05■■□□□ 1.6
CLN6-201ENST00000249806 GOLGA6L19H0YKK7 550 aa25.05■■□□□ 1.6
CLN6-201ENST00000249806 RCAN1P53805 252 aa25.05■■□□□ 1.6
CLN6-201ENST00000249806 GRAPQ13588 217 aa25.05■■□□□ 1.6
CLN6-201ENST00000249806 SHC4Q6S5L8 630 aa25.05■■□□□ 1.6
CLN6-201ENST00000249806 GRAPLQ8TC17 118 aaPredicted RBP25.05■■□□□ 1.6
CLN6-201ENST00000249806 CRNKL1Q9BZJ0 848 aaKnown RBP25.05■■□□□ 1.6
CLN6-201ENST00000249806 ONECUT3O60422 494 aaPredicted RBP25.05■■□□□ 1.6
CLN6-201ENST00000249806 IFIT1BQ5T764 474 aaKnown RBP25.05■■□□□ 1.6
CLN6-201ENST00000249806 DHX40Q8IX18 779 aaKnown RBP25.05■■□□□ 1.6
CLN6-201ENST00000249806 PIBF1Q8WXW3 757 aa25.05■■□□□ 1.6
CLN6-201ENST00000249806 R3HCC1Q9Y3T6 440 aaKnown RBP25.05■■□□□ 1.6
CLN6-201ENST00000249806 CYP2D6P10635 497 aa25.04■■□□□ 1.6
CLN6-201ENST00000249806 IQCA1Q86XH1 822 aa25.04■■□□□ 1.6
CLN6-201ENST00000249806 GPR101Q96P66 508 aaPredicted RBP25.04■■□□□ 1.6
CLN6-201ENST00000249806 NRBP1Q9UHY1 535 aa25.04■■□□□ 1.6
CLN6-201ENST00000249806 GOLGA6L6A8MZA4 724 aa25.04■■□□□ 1.6
CLN6-201ENST00000249806 TOB1P50616 345 aaPredicted RBP25.04■■□□□ 1.6
CLN6-201ENST00000249806 SAFBQ15424 915 aaKnown RBP eCLIP25.04■■□□□ 1.6
CLN6-201ENST00000249806 SLC4A8Q2Y0W8 1093 aa25.04■■□□□ 1.6
CLN6-201ENST00000249806 DRC7Q8IY82 874 aa25.04■■□□□ 1.6
CLN6-201ENST00000249806 CCDC88AQ3V6T2 1871 aa25.03■■□□□ 1.6
CLN6-201ENST00000249806 hCG_1642624A0A1W2PR95 340 aa25.03■■□□□ 1.6
CLN6-201ENST00000249806 NMT2O60551 498 aa25.03■■□□□ 1.6
CLN6-201ENST00000249806 PTGS1P23219 599 aa25.03■■□□□ 1.6
CLN6-201ENST00000249806 NR5A1Q13285 461 aa25.03■■□□□ 1.6
CLN6-201ENST00000249806 PRR5LQ6MZQ0 368 aa25.03■■□□□ 1.6
CLN6-201ENST00000249806 BCL11BQ9C0K0 894 aaPredicted RBP25.03■■□□□ 1.6
CLN6-201ENST00000249806 MYH6P13533 1939 aa25.03■■□□□ 1.6
CLN6-201ENST00000249806 BECN2A8MW95 431 aa25.02■■□□□ 1.6
CLN6-201ENST00000249806 SLC3A2P08195 630 aaKnown RBP25.02■■□□□ 1.6
CLN6-201ENST00000249806 NOLC1Q14978 699 aaKnown RBP eCLIP25.02■■□□□ 1.6
CLN6-201ENST00000249806 FAM47AQ5JRC9 791 aa25.02■■□□□ 1.6
CLN6-201ENST00000249806 DZIP1Q86YF9 867 aaKnown RBP25.02■■□□□ 1.6
CLN6-201ENST00000249806 JMYQ8N9B5 988 aa25.02■■□□□ 1.6
CLN6-201ENST00000249806 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.02■■□□□ 1.6
CLN6-201ENST00000249806 ATP8A2Q9NTI2 1148 aa25.02■■□□□ 1.6
CLN6-201ENST00000249806 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.02■■□□□ 1.67e-6■■■■■ 33.6
CLN6-201ENST00000249806 SYKP43405 635 aa25.02■■□□□ 1.6
CLN6-201ENST00000249806 CATIPQ7Z7H3 387 aa25.02■■□□□ 1.6
CLN6-201ENST00000249806 OXER1Q8TDS5 423 aa25.02■■□□□ 1.6
CLN6-201ENST00000249806 SHISA4Q96DD7 197 aa25.02■■□□□ 1.6
CLN6-201ENST00000249806 BIN1O00499 593 aa25.01■■□□□ 1.59
CLN6-201ENST00000249806 TROAPQ12815 778 aa25.01■■□□□ 1.59
CLN6-201ENST00000249806 DPCR1Q3MIW9 517 aa25.01■■□□□ 1.59
CLN6-201ENST00000249806 CCDC186Q7Z3E2 898 aa25.01■■□□□ 1.59
CLN6-201ENST00000249806 CEP57L1Q8IYX8 460 aa25.01■■□□□ 1.59
CLN6-201ENST00000249806 PYCARDQ9ULZ3 195 aa25.01■■□□□ 1.59
CLN6-201ENST00000249806 HPSEQ9Y251 543 aa25.01■■□□□ 1.59
CLN6-201ENST00000249806 PLEKHA8P1O95397 391 aa25.01■■□□□ 1.59
CLN6-201ENST00000249806 PCP11498 1178 aaKnown RBP25.01■■□□□ 1.59
CLN6-201ENST00000249806 RNF26Q9BY78 433 aaPredicted RBP25.01■■□□□ 1.59
CLN6-201ENST00000249806 FOXP1Q9H334 677 aaPredicted RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms