RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Ltb4r2Q9JJL9 360 aa10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Tmod2Q9JKK7 351 aa10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Nlrp9bQ66X22 1003 aa10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Ppp2r5bQ6PD28 497 aa10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Haus2Q9CQS9 234 aa10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Mipol1Q9D9F8 279 aa10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Ehd4Q9EQP2 541 aa10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Tacc2Q9JJG0 1149 aa10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Setdb1O88974 1307 aa10.65□□□□□ -0.71
Ldlr-202ENSMUST00000213114 VrtnQ3SYK4 740 aa10.65□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Uba5Q8VE47 403 aa10.65□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Eaf2Q91ZD6 262 aa10.65□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Tubb4aQ9D6F9 444 aa10.65□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Popdc2Q9ES82 367 aa10.65□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Mx2Q9WVP9 655 aa10.65□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Flt4P35917 1363 aa10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Dync1i1O88485 628 aa10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Mcm7Q61881 719 aaKnown RBP10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Zfp91Q62511 572 aa10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Sptlc3Q8BG54 563 aa10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Pnpla2Q8BJ56 486 aa10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 BbxQ8VBW5 907 aa10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Fam114a1Q9D281 569 aa10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Mroh6V9GX81 722 aa10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Gm1993A6X8I0 212 aa10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Lekr1B2RVN1 116 aa10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 SlxD3Z347 212 aa10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 1700013D24RikQ0P521 120 aa10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Nlrp2Q4PLS0 1046 aaKnown RBP10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Ppm1eQ80TL0 749 aa10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Erlin2Q8BFZ9 340 aa10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Kcnq3Q8K3F6 873 aa10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Arhgef28P97433 1693 aa10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Cyp2c23E9Q5K4 494 aa10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Ube4aE9Q735 1028 aa10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Hmgb1P63158 215 aaKnown RBP10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 ErmnQ5EBJ4 281 aa10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 LpxnQ99N69 386 aa10.64□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Fbf1A2A870 1173 aa10.63□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Wdr70Q3TWF6 657 aa10.63□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Brinp3Q499E0 766 aa10.63□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Tmtc2Q56A06 836 aa10.63□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Calml3Q9D6P8 149 aa10.63□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Oxr1Q4KMM3 866 aa10.63□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Lrrc45Q8CIM1 670 aa10.63□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Mettl5Q8K1A0 209 aa10.63□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Eid1Q9DCR4 169 aa10.63□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Nid2O88322 1403 aa10.63□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Med23Q80YQ2 1367 aa10.63□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Sept1P42209 366 aa10.63□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Specc1lQ2KN98 1118 aaKnown RBP10.63□□□□□ -0.71
Ldlr-202ENSMUST00000213114 C87499Q3UX49 493 aa10.63□□□□□ -0.71
Ldlr-202ENSMUST00000213114 AdnpQ9Z103 1108 aaKnown RBP10.63□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Gm3409A0A0G2JE67 319 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Mx1P09922 631 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Pde6aP27664 859 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Stat5bP42232 786 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Plcb3P51432 1234 aaKnown RBP10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Samsn1P57725 372 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Dynll1P63168 89 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Znf667Q2TL60 609 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Lins1Q3U1D0 764 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Gpbp1Q6NXH3 473 aaKnown RBP10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Sec62Q8BU14 398 aaKnown RBP10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Gm5934D3Z4U6 212 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Ccdc42Q5SV66 316 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Atp2b4Q6Q477 1205 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 A0A1Y7VML8 143 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 AK157302I3ITR1 129 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Pak1O88643 545 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Cd3dP04235 173 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Trap1aP19473 224 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Prpf38aQ4FK66 312 aaKnown RBP10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Smarcc2Q6PDG5 1213 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Slc44a1Q6X893 653 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Susd4Q8BH32 490 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Matr3Q8K310 846 aaKnown RBP10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Lman1Q9D0F3 517 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Isca1Q9D924 129 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Olr1Q9EQ09 363 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Gtf2iQ9ESZ8 998 aaKnown RBP10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Stk39Q9Z1W9 556 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Dip2bQ3UH60 1574 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Vmn2r23E9PXI5 849 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Arhgef2Q60875 985 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Atp1a2Q6PIE5 1020 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Asic3Q6X1Y6 530 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 PicalmQ7M6Y3 660 aaKnown RBP10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Olfr118Q7TRJ6 321 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Dnaaf2Q8BPI1 814 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Kiaa1024Q8K3V7 917 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Desi2Q9D291 194 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 EhhadhQ9DBM2 718 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Gdf11Q9Z1W4 405 aa10.62□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Pald1P70261 859 aa10.61□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Top1Q04750 767 aaKnown RBP10.61□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Arid3aQ62431 601 aa10.61□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Sp4Q62445 782 aa10.61□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Oxsr1Q6P9R2 527 aa10.61□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Sh3d21Q7TSG5 549 aa10.61□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms