RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Rapgef6Q5NCJ1 1609 aa11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 Eif4a2P10630 407 aa11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 Pkp1P97350 728 aaKnown RBP11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 Zfp781Q0P5U5 243 aa11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 Tekt2Q922G7 430 aa11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 AdarQ99MU3 1178 aaKnown RBP11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 AticQ9CWJ9 592 aaKnown RBP11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 AnkarA2RT91 1465 aa11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 Serpinb6eI7HJI3 429 aa11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 Pdrg1P59048 133 aa11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 Sf3b2Q3UJB0 878 aaKnown RBP11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 Spata16Q8C636 571 aa11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 CgasQ8C6L5 507 aa11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 Pym1Q8CHP5 203 aaKnown RBP11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 Cwc25Q9DBF7 416 aa11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 Cacna2d1O08532 1103 aa11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 Cetn3O35648 167 aa11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 Cdk4P30285 303 aa11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 Gucy2fQ5SDA5 1108 aa11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 Kdm3bQ6ZPY7 1562 aa11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 Ddx42Q810A7 929 aaKnown RBP11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 Zc3h6Q8BYK8 1177 aa11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 Apbb1ipQ8R5A3 670 aa11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 Smc6Q924W5 1097 aa11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 Adgrb2Q8CGM1 1561 aa11.39□□□□□ -0.59
Lig4-201ENSMUST00000095476 Kctd16Q5DTY9 427 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Usp28Q5I043 1051 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Sdccag8Q80UF4 717 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 GopcQ8BH60 463 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Fermt2Q8CIB5 680 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 P3h4Q8K2B0 443 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Tada3Q8R0L9 432 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Pcdhb22Q91XZ8 794 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Kif17Q99PW8 1038 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 AatkQ80YE4 1365 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Gm43638A0A0J9YU36 694 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Gm6588E9Q3K0 461 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Casp8O89110 480 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Dnm2P39054 870 aaKnown RBP11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Vps37dQ810I0 261 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Epc1Q8C9X6 813 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Eif3bQ8JZQ9 803 aaKnown RBP11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Klhl20Q8VCK5 604 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Olr1Q9EQ09 363 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Prl7a2O54831 253 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Calm1P0DP26 149 aaKnown RBP11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Calm2P0DP27 149 aaKnown RBP11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Calm3P0DP28 149 aaKnown RBP11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Vps54Q5SPW0 977 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Ccdc155Q80VJ8 648 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Lmbrd2Q8C561 694 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Pcdhb15Q91Y04 786 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Ophn1Q99J31 802 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Actn2Q9JI91 894 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Kiaa1107Q80TK0 1369 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Gm2030D3Z7C4 212 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 SfswapQ3USH5 945 aaKnown RBP11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Cdc37Q61081 379 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Cct6bQ61390 531 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Nup58Q8R332 587 aa11.38□□□□□ -0.59
Lig4-201ENSMUST00000095476 Fam170aQ66LM6 333 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Zkscan3Q91VW9 553 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Pcdhgc5Q91XW9 944 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Asic2Q925H0 512 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Lmtk2Q3TYD6 1471 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Ttc13A0A1L1SSC7 844 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Parp2O88554 559 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Ighmbp2P40694 993 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Cetn1P41209 172 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 S100a5P63084 93 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Vil1Q62468 827 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Klhl29Q80T74 875 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Pde6cQ91ZQ1 861 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Edc4Q3UJB9 1406 aaKnown RBP11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Ttll7A4Q9F0 912 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Pde4bB1AWC9 736 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Akr1c19G3X9Y6 323 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Kif5aP33175 1027 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Akr1b8P45377 316 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Unc5clQ6R653 518 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Ube2oQ6ZPJ3 1288 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Clec16aQ80U30 1036 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Ccdc40Q8BI79 1192 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 PtprgQ05909 1442 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 DgkiD3YWQ0 1071 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Hcls1P49710 486 aaKnown RBP11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Arhgef2Q60875 985 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 E330017A01RikQ8BU47 192 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Kcnh5Q920E3 988 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Cbx6Q9DBY5 414 aa11.37□□□□□ -0.59
Lig4-201ENSMUST00000095476 Bfsp1A2AMT1 669 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Ccdc24E9PUW8 296 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Ccdc175E9PVB3 822 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Ap1g2O88512 791 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 GnaqP21279 359 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 CtcfQ61164 736 aaKnown RBP11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Ccdc182Q9D9C6 152 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 HnrnpcQ9Z204 313 aaKnown RBP11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Scaf11E9PZM7 1456 aaKnown RBP11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 A0A1W2P6Q8 802 aa11.36□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms