RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Sned1Q70E20 1403 aa8.76□□□□□ -1.01
Trim40-201ENSMUST00000087158 Pcmtd1P59913 357 aa8.75□□□□□ -1.01
Trim40-201ENSMUST00000087158 Sec23aQ01405 765 aa8.75□□□□□ -1.01
Trim40-201ENSMUST00000087158 Cep131Q62036 1060 aa8.75□□□□□ -1.01
Trim40-201ENSMUST00000087158 Ppp2r5bQ6PD28 497 aa8.75□□□□□ -1.01
Trim40-201ENSMUST00000087158 Otop3Q80UF9 577 aa8.75□□□□□ -1.01
Trim40-201ENSMUST00000087158 WaslQ91YD9 501 aa8.75□□□□□ -1.01
Trim40-201ENSMUST00000087158 Efcc1Q9JJF6 558 aa8.75□□□□□ -1.01
Trim40-201ENSMUST00000087158 Mx2Q9WVP9 655 aa8.75□□□□□ -1.01
Trim40-201ENSMUST00000087158 Ccdc112A0AUP1 442 aa8.75□□□□□ -1.01
Trim40-201ENSMUST00000087158 Prss40A6H6T1 365 aa8.75□□□□□ -1.01
Trim40-201ENSMUST00000087158 Ccdc85cE9Q6B2 420 aa8.75□□□□□ -1.01
Trim40-201ENSMUST00000087158 Abl1P00520 1123 aa8.75□□□□□ -1.01
Trim40-201ENSMUST00000087158 Dnajc2P54103 621 aaKnown RBP8.75□□□□□ -1.01
Trim40-201ENSMUST00000087158 Ppp4cP97470 307 aa8.75□□□□□ -1.01
Trim40-201ENSMUST00000087158 Fhdc1Q3ULZ2 1149 aa8.75□□□□□ -1.01
Trim40-201ENSMUST00000087158 Ttll4Q80UG8 1193 aa8.75□□□□□ -1.01
Trim40-201ENSMUST00000087158 Ccdc39Q9D5Y1 937 aa8.75□□□□□ -1.01
Trim40-201ENSMUST00000087158 Gdf11Q9Z1W4 405 aa8.75□□□□□ -1.01
Trim40-201ENSMUST00000087158 Lnx1O70263 728 aa8.74□□□□□ -1.01
Trim40-201ENSMUST00000087158 EzrP26040 586 aaKnown RBP8.74□□□□□ -1.01
Trim40-201ENSMUST00000087158 Usp28Q5I043 1051 aa8.74□□□□□ -1.01
Trim40-201ENSMUST00000087158 AsnsQ61024 561 aa8.74□□□□□ -1.01
Trim40-201ENSMUST00000087158 Slitrk3Q810B9 980 aa8.74□□□□□ -1.01
Trim40-201ENSMUST00000087158 Ranbp6Q8BIV3 1105 aa8.74□□□□□ -1.01
Trim40-201ENSMUST00000087158 QarsQ8BML9 775 aa8.74□□□□□ -1.01
Trim40-201ENSMUST00000087158 Wasf1Q8R5H6 559 aa8.74□□□□□ -1.01
Trim40-201ENSMUST00000087158 Cyp2ab1S4R196 498 aa8.74□□□□□ -1.01
Trim40-201ENSMUST00000087158 Wdr33Q8K4P0 1330 aaKnown RBP8.74□□□□□ -1.01
Trim40-201ENSMUST00000087158 Col4a5Q63ZW6 1691 aa8.74□□□□□ -1.01
Trim40-201ENSMUST00000087158 1700113H08RikE9Q9Q5 327 aa8.74□□□□□ -1.01
Trim40-201ENSMUST00000087158 Ccng2O08918 344 aa8.74□□□□□ -1.01
Trim40-201ENSMUST00000087158 Adcy5P84309 1262 aa8.74□□□□□ -1.01
Trim40-201ENSMUST00000087158 Dok7Q18PE0 504 aa8.74□□□□□ -1.01
Trim40-201ENSMUST00000087158 Mum1l1Q4VA55 681 aa8.74□□□□□ -1.01
Trim40-201ENSMUST00000087158 TrhQ62361 256 aa8.74□□□□□ -1.01
Trim40-201ENSMUST00000087158 Stn1Q8K2X3 378 aa8.74□□□□□ -1.01
Trim40-201ENSMUST00000087158 Gys2Q8VCB3 704 aa8.74□□□□□ -1.01
Trim40-201ENSMUST00000087158 Col4a3bpQ9EQG9 624 aa8.74□□□□□ -1.01
Trim40-201ENSMUST00000087158 StrcQ8VIM6 1809 aa8.73□□□□□ -1.01
Trim40-201ENSMUST00000087158 Cfap58B2RW38 873 aa8.73□□□□□ -1.01
Trim40-201ENSMUST00000087158 Ces1hD3Z298 562 aa8.73□□□□□ -1.01
Trim40-201ENSMUST00000087158 Slc1a4O35874 532 aa8.73□□□□□ -1.01
Trim40-201ENSMUST00000087158 Ptgs1P22437 602 aa8.73□□□□□ -1.01
Trim40-201ENSMUST00000087158 Rpusd2Q149F1 553 aa8.73□□□□□ -1.01
Trim40-201ENSMUST00000087158 Llgl2Q3TJ91 1027 aa8.73□□□□□ -1.01
Trim40-201ENSMUST00000087158 Gm28047Q3US59 414 aa8.73□□□□□ -1.01
Trim40-201ENSMUST00000087158 Pus7lQ8CE46 702 aa8.73□□□□□ -1.01
Trim40-201ENSMUST00000087158 Evc2Q8K1G2 1220 aa8.73□□□□□ -1.01
Trim40-201ENSMUST00000087158 Bicd2Q921C5 820 aa8.73□□□□□ -1.01
Trim40-201ENSMUST00000087158 Ccdc94Q9D6J3 314 aa8.73□□□□□ -1.01
Trim40-201ENSMUST00000087158 Tcof1O08784 1320 aaKnown RBP8.73□□□□□ -1.01
Trim40-201ENSMUST00000087158 Mtcl1Q3UHU5 1945 aa8.73□□□□□ -1.01
Trim40-201ENSMUST00000087158 Prr16A3KMN5 304 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Adam7O35227 789 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Calm1P0DP26 149 aaKnown RBP8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Calm2P0DP27 149 aaKnown RBP8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Calm3P0DP28 149 aaKnown RBP8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Dnm1P39053 867 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 TbcaP48428 108 aaKnown RBP8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Gja5Q01231 358 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Ccdc162pQ0VG85 912 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Lins1Q3U1D0 764 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Tmem109Q3UBX0 243 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Tbc1d5Q80XQ2 815 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Cdca8Q8BHX3 289 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Tbc1d23Q8K0F1 684 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Rtn1Q8K0T0 780 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 TraipQ8VIG6 470 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Slc44a4Q91VA1 707 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Ccer1Q9CQL2 403 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Slc4a5E9Q3M5 1116 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Kif23E9Q5G3 953 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 U2af2P26369 475 aaKnown RBP8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Cplx1P63040 134 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Nell2Q61220 819 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Fxr1Q61584 677 aaKnown RBP8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Oxsr1Q6P9R2 527 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Kif1bpQ6ZPU9 617 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Fam117aQ7TNF9 451 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Stac3Q8BZ71 360 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Col23a1Q8K4G2 532 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Lrrc2Q8VDB8 371 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Yeats4Q9CR11 227 aaKnown RBP8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Telo2Q9DC40 840 aaKnown RBP8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Irx4Q9QY61 515 aa8.72□□□□□ -1.01
Trim40-201ENSMUST00000087158 Ano3A2AHL1 981 aa8.71□□□□□ -1.01
Trim40-201ENSMUST00000087158 Tbc1d8bA3KGB4 1114 aa8.71□□□□□ -1.01
Trim40-201ENSMUST00000087158 Mcm3P25206 812 aaKnown RBP8.71□□□□□ -1.01
Trim40-201ENSMUST00000087158 Traf3ip1Q149C2 625 aa8.71□□□□□ -1.01
Trim40-201ENSMUST00000087158 Prpf38aQ4FK66 312 aaKnown RBP8.71□□□□□ -1.01
Trim40-201ENSMUST00000087158 Tmtc2Q56A06 836 aa8.71□□□□□ -1.01
Trim40-201ENSMUST00000087158 Atp2b4Q6Q477 1205 aa8.71□□□□□ -1.01
Trim40-201ENSMUST00000087158 Acnat2Q8BGG9 420 aa8.71□□□□□ -1.01
Trim40-201ENSMUST00000087158 Myl6bQ8CI43 207 aa8.71□□□□□ -1.01
Trim40-201ENSMUST00000087158 Gpr37l1Q99JG2 481 aa8.71□□□□□ -1.01
Trim40-201ENSMUST00000087158 Hps4Q99KG7 671 aa8.71□□□□□ -1.01
Trim40-201ENSMUST00000087158 TnmdQ9EP64 317 aa8.71□□□□□ -1.01
Trim40-201ENSMUST00000087158 Eif4enif1Q9EST3 983 aaKnown RBP8.71□□□□□ -1.01
Trim40-201ENSMUST00000087158 Stk39Q9Z1W9 556 aa8.71□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms