RNA–Protein interactions for RNA: ENSMUST00000035911.4

Rc3h1-201, Transcript of Roquin-1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rc3h1, Length 3,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-201ENSMUST00000035911 Kcnh3Q9WVJ0 1095 aa6.41□□□□□ -1.38
Rc3h1-201ENSMUST00000035911 Sept3Q9Z1S5 350 aa6.41□□□□□ -1.38
Rc3h1-201ENSMUST00000035911 Klhl33G3UW92 533 aa6.4□□□□□ -1.38
Rc3h1-201ENSMUST00000035911 Opa1P58281 960 aa6.4□□□□□ -1.38
Rc3h1-201ENSMUST00000035911 Mrps31Q61733 384 aaKnown RBP6.4□□□□□ -1.38
Rc3h1-201ENSMUST00000035911 Stkld1Q80YS9 662 aa6.4□□□□□ -1.38
Rc3h1-201ENSMUST00000035911 Asnsd1Q8BFS9 627 aa6.4□□□□□ -1.38
Rc3h1-201ENSMUST00000035911 D130040H23RikQ8BII3 405 aa6.4□□□□□ -1.38
Rc3h1-201ENSMUST00000035911 Leng8Q8CBY3 785 aaKnown RBP6.4□□□□□ -1.38
Rc3h1-201ENSMUST00000035911 Lrrc45Q8CIM1 670 aa6.4□□□□□ -1.38
Rc3h1-201ENSMUST00000035911 Tldc1Q8K0P3 455 aa6.4□□□□□ -1.38
Rc3h1-201ENSMUST00000035911 Uap1Q91YN5 522 aa6.4□□□□□ -1.38
Rc3h1-201ENSMUST00000035911 Calr3Q9D9Q6 380 aa6.4□□□□□ -1.38
Rc3h1-201ENSMUST00000035911 Uso1Q9Z1Z0 959 aaKnown RBP6.4□□□□□ -1.38
Rc3h1-201ENSMUST00000035911 4930407I10RikD3Z5T8 1512 aa6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Cep85lA0A1W2P884 806 aa6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Pde4bB1AWC9 736 aa6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Rexo5D3YW29 759 aa6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Cpsf2O35218 782 aaKnown RBP6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Prl7a2O54831 253 aa6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Emc10Q3TAS6 258 aa6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Myo6Q64331 1265 aa6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Btbd11Q6GQW0 1109 aa6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Naa35Q6PHQ8 725 aa6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Spag7Q7TNE3 227 aaKnown RBP6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Aldh5a1Q8BWF0 523 aa6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Gigyf1Q99MR1 1044 aaKnown RBP6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Fam217aQ9D9W6 419 aa6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Abcc12Q80WJ6 1366 aa6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 VimP20152 466 aaKnown RBP6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Sox5P35710 763 aa6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Myo1fP70248 1099 aa6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Ccdc138Q0VF22 680 aa6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Fnbp1Q80TY0 616 aa6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Enox1Q8BHR2 643 aaKnown RBP6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Trim59Q922Y2 403 aa6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Entpd5Q9WUZ9 427 aa6.4□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Akap12Q9WTQ5 1684 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Carmil3Q3UFQ8 1375 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Dctn1O08788 1281 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Rgs9O54828 675 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Tab3Q571K4 716 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Tgfb1i1Q62219 461 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Irak1Q62406 710 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Ehbp1Q69ZW3 1231 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Jade2Q6ZQF7 829 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Cep104Q80V31 926 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Acbd3Q8BMP6 525 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Iffo1Q8BXL9 562 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Rint1Q8BZ36 792 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Slf1Q8R3P9 1054 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Pcdha7Q91Y13 937 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Tab2Q99K90 693 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 RarsQ9D0I9 660 aaKnown RBP6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Mfap3lQ9D3X9 409 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 4930449I24RikQ9D5E3 319 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Pde3aQ9Z0X4 1141 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Knop1Q9Z2Q2 478 aaKnown RBP6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Usp32F8VPZ3 1604 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Larp1bA0A0A6YXJ7 370 aaKnown RBP6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Rbbp8nlA2ABX0 614 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Il27raO70394 623 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Casp8O89110 480 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Hoxd11P23813 323 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Pdrg1P59048 133 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Cct6aP80317 531 aaKnown RBP6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Stim2P83093 746 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Tmem232Q5K6N0 675 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Spty2d1Q68FG3 682 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Acnat2Q8BGG9 420 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Vmn1r218Q8R261 298 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 ParnQ8VDG3 624 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Trim11Q99PQ2 467 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Vnn1Q9Z0K8 512 aa6.39□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Cdc27A2A6Q5 825 aa6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Myo1eE9Q634 1107 aa6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Speer4aF8VPX6 267 aa6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Ube3aO08759 870 aa6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Dnm1P39053 867 aa6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Vps54Q5SPW0 977 aa6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Ccdc157Q5SPX1 718 aa6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Ythdf3Q8BYK6 585 aaKnown RBP6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Atp6v0a4Q920R6 833 aa6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Xrcc4Q924T3 326 aa6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Rsrc1Q9DBU6 334 aa6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Apol8A2VDH7 339 aaKnown RBP6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Adssl1P28650 457 aa6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Ctnnd1P30999 938 aaKnown RBP6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Pth1rP41593 591 aa6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Nkx2-5P42582 318 aa6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Trim80Q3V061 624 aa6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 VeztQ3ZK22 780 aa6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Rap1gap2Q5SVL6 712 aaKnown RBP6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Sh3gl2Q62420 352 aa6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Hook2Q7TMK6 716 aa6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Larp6Q8BN59 492 aa6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Sec62Q8BU14 398 aaKnown RBP6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 Dnajc5gQ8C632 165 aa6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 ClasrpQ8CFC7 668 aa6.38□□□□□ -1.39
Rc3h1-201ENSMUST00000035911 HdlbpQ8VDJ3 1268 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms