RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 Leap2Q91V13 76 aa11.26□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Plxna2P70207 1894 aa11.25□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Igkv4-72A0A0B4J1I4 117 aa11.25□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Gm26602M0QWA4 95 aa11.25□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 P04942 107 aa11.25□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Iglc1A0A0G2JE99 106 aa11.25□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 P01843 105 aa11.25□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 NpbQ8K4P1 119 aa11.25□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Ighv1-74A0A0G2JGK2 117 aa11.25□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 P01756 117 aa11.25□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 P01757 117 aa11.25□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Atp6v0e2Q91XE7 81 aa11.25□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Ramp1Q9WTJ5 148 aa11.25□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Col4a5Q63ZW6 1691 aa11.25□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Atg2aQ6P4T0 1914 aa11.24□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Trav4d-3A0A075B625 110 aa11.24□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Ighv1-77A0A0G2JGS9 117 aa11.24□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Rbm3O89086 153 aaKnown RBP11.24□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Tmem263Q9DAM7 115 aa11.24□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Atp5eP56382 52 aa11.24□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 SelenowP63300 88 aa11.24□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Gm12253Q5NC48 229 aa11.24□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Gm20726G3UX18 150 aa11.23□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Gtf3c1Q8K284 2101 aa11.23□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Fstl3Q9EQC7 256 aa11.23□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Trbv14A0A140T8L9 115 aa11.23□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 3110021N24RikJ3QMN2 152 aa11.23□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Cela2aP05208 271 aa11.23□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Gm5941Q497P9 117 aa11.23□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Plxnd1Q3UH93 1925 aa11.23□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Ighv1-50A0A075B5W1 117 aa11.23□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 P01739 132 aa11.23□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Hoxd3P09027 433 aa11.23□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Defb47Q30KN1 79 aa11.23□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 9930022D16RikQ8BG27 128 aa11.23□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Tmem52Q9D702 196 aa11.23□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Gp9O88186 177 aa11.22□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 3110082J24RikF6Z6Z2 108 aa11.22□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 LoxP28301 411 aa11.22□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Defb29Q8BGW9 78 aa11.22□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Tln2Q71LX4 2375 aa11.22□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Ighv3-4A0A0A6YXF1 117 aa11.22□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 NpyP57774 97 aa11.22□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Nlrc5C3VPR6 1915 aa11.22□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 P01837 106 aa11.22□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Foxc1Q61572 553 aa11.22□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Igkv4-69A0A0B4J1I6 116 aa11.21□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Gm15093A2BI72 449 aa11.21□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Gm15097E9QA14 449 aa11.21□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Gm10295Q8CCF3 114 aa11.21□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Fancd2osQ9D4K4 178 aa11.21□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Foxi2Q3I5G5 311 aa11.21□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 7420426K07RikQ3UX66 186 aa11.21□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Akap6E9Q9K8 2307 aa11.21□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Nxph4G3X9N5 304 aa11.21□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Ighv1-4A0A075B5T4 117 aa11.2□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Glrp1E9Q9S8 174 aa11.2□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Gm20481G3UXK4 153 aa11.2□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 P0C913 63 aa11.2□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Lgals4Q8K419 326 aa11.2□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 AtrxQ61687 2476 aaKnown RBP11.2□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Ang4Q3TMQ6 144 aa11.2□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 BC048562Q80ZQ7 204 aa11.2□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Pi4kaE9Q3L2 2105 aa11.2□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Lst1O08843 95 aa11.2□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Chchd5Q9CQP3 110 aa11.2□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 PoleQ9WVF7 2283 aa11.2□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Smim10l1A0A087WNQ7 89 aa11.19□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Tmem210Q9D2F0 147 aa11.19□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Timm17aQ9Z0V8 171 aa11.19□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Ighv5-8A0A075B676 92 aa11.19□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Igkv4-78A0A0A6YYE5 119 aa11.19□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Trav4-3A0A0B4J1K1 110 aa11.19□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Zc2hc1aQ8BJH1 324 aa11.19□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Igkv4-79A0A075B5L8 119 aa11.19□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Gm17455G3UW87 128 aa11.18□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Reg3gO09049 174 aa11.18□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Gm20730A0A075B5J6 119 aa11.18□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Igkv4-57A0A0A6YYE7 117 aa11.18□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Asxl3Q8C4A5 2259 aa11.18□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Cfap46E9Q2C0 2641 aa11.18□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Dock9Q8BIK4 2055 aa11.18□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Cep295Q8BQ48 2412 aa11.18□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 PemtQ61907 199 aa11.17□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Greb1Q3UHK3 1954 aa11.17□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Dad1P61804 113 aa11.17□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Tmem213Q08EA8 116 aa11.17□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 C920008G01RikA0A0B4J1N1 112 aa11.17□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 1500011B03RikQ3TTH7 73 aa11.16□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Dand5Q76LW6 185 aa11.16□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 MylkQ6PDN3 1941 aaKnown RBP11.16□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Vsig4F6TUL9 280 aa11.16□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 P01750 117 aa11.16□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 P06330 118 aa11.16□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Mlst8Q9DCJ1 326 aa11.16□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Gm9970F6ZED4 185 aa11.16□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Nup210lQ9D2F7 1881 aa11.15□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Smim20D3Z7Q2 69 aa11.15□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Gm5468Q8C3D3 155 aa11.15□□□□□ -0.62
Pcdha8-201ENSMUST00000194038 Cryba4Q9JJV0 196 aa11.15□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 56.6 ms