RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Shisa9Q9CZN4 424 aa9.66□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 MgaA2AWL7 3003 aaKnown RBP9.66□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 D930048N14RikA2AA67 225 aa9.66□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Umad1E0CX23 159 aa9.66□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Hspe1Q64433 102 aaKnown RBP9.66□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 GlrxQ9QUH0 107 aa9.66□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Wfdc11A2A5H7 82 aa9.66□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 SNORCQ9CXL7 121 aa9.66□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 BptfA2A654 3036 aaKnown RBP9.66□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 DmdP11531 3678 aa9.65□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Gm42674D3YUT9 64 aa9.65□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 Tac4Q99N14 128 aa9.65□□□□□ -0.86
Pcdh1-202ENSMUST00000159405 P04942 107 aa9.65□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 P06334 169 aa9.65□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Ccl6P27784 116 aa9.65□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Defa4P28311 92 aa9.65□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 BC106179Q8C9L1 186 aa9.65□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Cysrt1Q9D1E4 142 aa9.65□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Fbn2Q61555 2907 aa9.65□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Defb33Q30KN3 62 aa9.64□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Gm904Q3V2L5 102 aa9.64□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Olfr312Q7TRZ9 308 aa9.64□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Spink6Q8BT20 105 aa9.64□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Gm9949Q8C9F4 104 aa9.64□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Smim1P0C8K7 78 aa9.64□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 P18527 97 aa9.64□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Q08AU9 97 aa9.64□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Gm4763Q8CFJ5 196 aa9.64□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Q5BN45 167 aa9.64□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 EpopQ7TNS8 369 aa9.64□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Fstl3Q9EQC7 256 aa9.64□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Gm35549A0A0N4SUS7 141 aa9.63□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 P06330 118 aa9.63□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Znf691Q3TDE8 283 aa9.63□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Ighv1-20A0A0A6YX66 117 aa9.63□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 P0C1Z5 52 aa9.63□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Defb47Q30KN1 79 aa9.63□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 RpeQ8VEE0 228 aa9.63□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Atp5lQ9CPQ8 103 aa9.63□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Ash1lQ99MY8 2958 aa9.63□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Shisal2aA2A9G7 189 aa9.63□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Lynx1P0DP60 116 aa9.63□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Rbmy1bQ60990 380 aa9.63□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 RetnQ99P87 114 aa9.63□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Obp2bA2BHR0 176 aa9.62□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Luzp4B1AV09 449 aa9.62□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Gm15127B1AVZ5 449 aa9.62□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Gm15107B1B0X0 449 aa9.62□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 3110021N24RikJ3QMN2 152 aa9.62□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Cd5P13379 494 aa9.62□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Gm5105Q8C6Y9 112 aa9.62□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Prrc2aQ7TSC1 2158 aaKnown RBP9.62□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Ighv1-7A0A075B5T7 117 aa9.62□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Gm933J3QPC1 141 aa9.62□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Rab1bQ9D1G1 201 aa9.62□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 P04943 107 aa9.62□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Prima1Q810F0 153 aa9.62□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Nup37Q9CWU9 326 aa9.62□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Ighv1-37A0A0A6YW32 117 aa9.61□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 9830107B12RikD3Z5D6 160 aa9.61□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Edn2P22389 175 aa9.61□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Defa25Q5G864 92 aa9.61□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Smim10l1A0A087WNQ7 89 aa9.61□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Igkv2-137A0A0B4J1H6 120 aa9.61□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 S100a4P07091 101 aa9.61□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Gm10767Q3TQP0 103 aa9.61□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Cdx4Q07424 282 aa9.6□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Rnf185Q91YT2 192 aa9.6□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Znf672Q99LH4 468 aa9.6□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Ighv14-2A0A075B5R7 117 aa9.6□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 P01726 129 aa9.6□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 TtrP07309 147 aa9.6□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Gm28038F7BCN9 126 aa9.6□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 P01811 117 aa9.6□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Gm5464Q3UY29 175 aa9.6□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Chchd5Q9CQP3 110 aa9.6□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Gm26938S4R185 226 aa9.59□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Gm15091B1AZM2 449 aa9.59□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Foxc1Q61572 553 aa9.59□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Rnase2aQ8K196 155 aa9.59□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Avpi1Q9D7H4 142 aa9.59□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Il1f10Q8R459 152 aa9.59□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 Wdr38Q9D994 303 aa9.59□□□□□ -0.87
Pcdh1-202ENSMUST00000159405 P01837 106 aa9.58□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Gm10118Q8C8J5 116 aa9.58□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Gm10735Q3US96 136 aa9.58□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Lgals4Q8K419 326 aa9.58□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Pear1Q8VIK5 1034 aa9.58□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Dpm2Q9Z324 84 aa9.58□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Gm29423A0A087WRM1 55 aa9.58□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 SpegQ62407 3262 aa9.58□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Trav19A0A0B4J1K4 119 aa9.57□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Folr2Q05685 251 aa9.57□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Spint3Q3UW09 88 aa9.57□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 B430305J03RikQ8BQQ8 176 aa9.57□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Ovol2Q8CIV7 274 aa9.57□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Triap1Q9D8Z2 76 aa9.57□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 SpenQ62504 3644 aaKnown RBP9.57□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Gm20726G3UX18 150 aa9.56□□□□□ -0.88
Pcdh1-202ENSMUST00000159405 Zfp248Q640N4 576 aa9.56□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 51.4 ms