RNA–Protein interactions for RNA: ENSMUST00000113690.7

Tpm1-209, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 3 BASIC

Gene Tpm1, Length 2,890 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-209ENSMUST00000113690 Minos1Q7TNS2 76 aa11.28□□□□□ -0.6
Tpm1-209ENSMUST00000113690 Rbmxl2Q9DAE2 385 aaKnown RBP11.28□□□□□ -0.6
Tpm1-209ENSMUST00000113690 Sptan1P16546 2472 aaKnown RBP11.27□□□□□ -0.6
Tpm1-209ENSMUST00000113690 Ighv1-62-3P01754 117 aa11.27□□□□□ -0.6
Tpm1-209ENSMUST00000113690 TshbP12656 138 aa11.27□□□□□ -0.6
Tpm1-209ENSMUST00000113690 Hspe1Q64433 102 aaKnown RBP11.27□□□□□ -0.6
Tpm1-209ENSMUST00000113690 Gm26938S4R185 226 aa11.27□□□□□ -0.6
Tpm1-209ENSMUST00000113690 Gm28269A0A087WSG3 125 aa11.27□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Esp3J3QN49 87 aa11.27□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Mrps21P58059 87 aa11.27□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Olfr312Q7TRZ9 308 aa11.27□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Obp2aQ8K1H9 176 aa11.27□□□□□ -0.61
Tpm1-209ENSMUST00000113690 ApomQ9Z1R3 190 aa11.27□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Obox8V9GWY9 217 aa11.27□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Igkv4-59A0A0B4J1I8 117 aa11.26□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Prr3Q811B5 190 aaKnown RBP11.26□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Shisa9Q9CZN4 424 aa11.26□□□□□ -0.61
Tpm1-209ENSMUST00000113690 SonQ9QX47 2444 aaKnown RBP11.26□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Trbv13-1A0A0B4J1P8 112 aa11.26□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Smim1P0C8K7 78 aa11.26□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Defb30Q30KN4 75 aa11.26□□□□□ -0.61
Tpm1-209ENSMUST00000113690 AW146154Q3TPQ7 468 aa11.26□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Tal2Q62282 108 aa11.26□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Srsf1Q6PDM2 248 aaKnown RBP11.26□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Mustn1Q99JI1 82 aa11.26□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Olfr311Q5NC59 308 aa11.26□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Obp2bA2BHR0 176 aa11.25□□□□□ -0.61
Tpm1-209ENSMUST00000113690 P06334 169 aa11.25□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Csn3P06796 181 aa11.25□□□□□ -0.61
Tpm1-209ENSMUST00000113690 S100a4P07091 101 aa11.25□□□□□ -0.61
Tpm1-209ENSMUST00000113690 E130116L18RikQ8BMV6 101 aa11.25□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Obox1Q9D350 204 aa11.25□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Col6a4A2AX52 2309 aa11.25□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Umad1E0CX23 159 aa11.25□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Srsf2Q62093 221 aaKnown RBP11.25□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Chac1Q8R3J5 223 aa11.25□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Piezo1E2JF22 2547 aa11.24□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Zfand3Q497H0 227 aa11.24□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Tmem30bQ8BHG3 353 aa11.24□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Q9CX63 252 aa11.24□□□□□ -0.61
Tpm1-209ENSMUST00000113690 CenpeQ6RT24 2474 aaKnown RBP11.24□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Gm5294J3QP53 216 aa11.24□□□□□ -0.61
Tpm1-209ENSMUST00000113690 P01725 110 aa11.24□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Ang5Q5GAN1 145 aa11.24□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Mrpl36Q99N90 102 aa11.24□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Cd69P37217 199 aa11.23□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Tmem170bP86050 132 aa11.23□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Q9CX25 107 aa11.23□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Pgpep1Q9ESW8 209 aa11.23□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Igkv4-71A0A0G2JEH0 117 aa11.23□□□□□ -0.61
Tpm1-209ENSMUST00000113690 A130051J06RikQ8CAU1 227 aa11.23□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Klk5Q9D140 293 aa11.23□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Gm42674D3YUT9 64 aa11.22□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Igkv2-137A0A0B4J1H6 120 aa11.22□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Parm1Q923D3 296 aa11.22□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Arid1bE9Q4N7 2244 aa11.22□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Igkv20-101-2A0A0G2JDU3 113 aa11.22□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Nsun4C4P6S0 806 aaKnown RBP11.22□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Fam240aJ3QNP9 97 aa11.22□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Rpl11Q9CXW4 178 aaKnown RBP11.22□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Pradc1Q9D9N8 188 aa11.22□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Wfdc11A2A5H7 82 aa11.21□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Esp4A8R0T8 117 aa11.21□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Sumo2P61957 95 aaKnown RBP11.21□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Trav2Q5R1I9 109 aa11.21□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Tmem219Q9D123 240 aa11.21□□□□□ -0.61
Tpm1-209ENSMUST00000113690 Ighv1-53A0A075B5W3 117 aa11.21□□□□□ -0.62
Tpm1-209ENSMUST00000113690 4930447F04RikA2AFR2 126 aa11.21□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Mrps12O35680 139 aa11.21□□□□□ -0.62
Tpm1-209ENSMUST00000113690 AamdcQ8R0P4 122 aa11.21□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Plac1Q9JI83 173 aa11.21□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Ighv1-4A0A075B5T4 117 aa11.2□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Ighv1-74A0A0G2JGK2 117 aa11.2□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Cdx4Q07424 282 aa11.2□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Tex26Q0VB26 296 aa11.2□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Sdhaf1Q3U276 118 aa11.2□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Q4KKZ1 196 aa11.2□□□□□ -0.62
Tpm1-209ENSMUST00000113690 TctaQ8VEA7 122 aa11.2□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Prss29Q99MS4 279 aa11.2□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Ighv3-4A0A0A6YXF1 117 aa11.2□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Ndufa4Q62425 82 aaKnown RBP11.2□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Zfp248Q640N4 576 aa11.2□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Spata45Q9CVW4 97 aa11.2□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Arl3Q9WUL7 182 aa11.2□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Ccl25O35903 144 aa11.19□□□□□ -0.62
Tpm1-209ENSMUST00000113690 P01747 120 aa11.19□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Ighv3-8A0A075B5T0 131 aa11.19□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Gm45785A0A1B0GT05 94 aa11.19□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Vamp8O70404 101 aa11.19□□□□□ -0.62
Tpm1-209ENSMUST00000113690 P01837 106 aa11.19□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Pla2g2dQ9WVF6 144 aa11.19□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Hcfc1Q61191 2045 aaKnown RBP11.19□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Gm10271F6WY25 52 aa11.18□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Edn3P48299 214 aa11.18□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Fam222aQ6PGH4 453 aa11.18□□□□□ -0.62
Tpm1-209ENSMUST00000113690 RhohQ9D3G9 191 aa11.18□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Ighv1-9A0A0A6YW37 117 aa11.18□□□□□ -0.62
Tpm1-209ENSMUST00000113690 Tcrg-C3L7N479 172 aa11.18□□□□□ -0.62
Tpm1-209ENSMUST00000113690 P03985 172 aa11.18□□□□□ -0.62
Tpm1-209ENSMUST00000113690 NrepQ07475 68 aa11.18□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms