RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 Nckap5E9QAE1 1909 aa13.15□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Nbl1Q61477 178 aa13.15□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Mpv17l2Q8VIK2 200 aa13.15□□□□□ -0.3
Shroom3-201ENSMUST00000113051 Higd2aQ9CQJ1 106 aa13.15□□□□□ -0.3
Shroom3-201ENSMUST00000113051 MifP34884 115 aaKnown RBP13.14□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Cfap126Q6P8X9 189 aa13.14□□□□□ -0.31
Shroom3-201ENSMUST00000113051 4930447F04RikA2AFR2 126 aa13.14□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Ucn2Q99ML8 113 aa13.14□□□□□ -0.31
Shroom3-201ENSMUST00000113051 P01794 123 aa13.14□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Gm10251J3QPM5 127 aa13.14□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Id3P41133 119 aa13.14□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Gm2916Q9D9B9 127 aa13.14□□□□□ -0.31
Shroom3-201ENSMUST00000113051 HampQ9EQ21 83 aa13.14□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Ndufa1O35683 70 aa13.14□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Cysrt1Q9D1E4 142 aa13.14□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Gm10203F6QJ09 66 aa13.13□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Igf2rQ07113 2483 aaKnown RBP13.13□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Morn3Q8C5T4 241 aa13.13□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Plxnb1Q8CJH3 2119 aa13.13□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Ighv3-1A0A075B5S6 116 aa13.13□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Q08AU9 97 aa13.13□□□□□ -0.31
Shroom3-201ENSMUST00000113051 9130213A22RikQ3V3T2 120 aa13.13□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Morn5Q9DAI9 170 aa13.13□□□□□ -0.31
Shroom3-201ENSMUST00000113051 4930415O20RikQ8CDT5 131 aa13.13□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Tln2Q71LX4 2375 aa13.12□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Ebi3O35228 228 aa13.12□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Cox11Q6P8I6 275 aa13.12□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Ighv6-7A0A0A6YWU3 119 aa13.12□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Gm4861Q8C5A4 106 aa13.12□□□□□ -0.31
Shroom3-201ENSMUST00000113051 P01745 121 aa13.12□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Trbv14A0A140T8L9 115 aa13.12□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Igkv3-5A0A140T8M6 119 aa13.12□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Wfdc15bQ9JHY4 80 aa13.12□□□□□ -0.31
Shroom3-201ENSMUST00000113051 MylkQ6PDN3 1941 aaKnown RBP13.11□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Lyrm9Q3UN90 78 aa13.11□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Crybg1A0A0G2JG52 2065 aa13.11□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Igkv1-88A0A140T8N1 120 aa13.11□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Xcl1P47993 114 aa13.11□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Hist2h2beQ64524 126 aa13.11□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Tnfrsf26P83626 204 aa13.11□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Ighv1-23A0A0A6YVW3 117 aa13.11□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Tcl1b2P56841 117 aa13.11□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Foxf1Q61080 378 aa13.11□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Spink10Q8CAC8 162 aa13.11□□□□□ -0.31
Shroom3-201ENSMUST00000113051 B230307C23RikQ8BLB2 64 aa13.1□□□□□ -0.31
Shroom3-201ENSMUST00000113051 NmbQ9CR53 121 aa13.1□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Frem1Q684R7 2191 aa13.1□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Rspo1Q9Z132 265 aa13.1□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Ndufa4Q62425 82 aaKnown RBP13.1□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Il22ra2Q80XF5 230 aa13.1□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Carhsp1Q9CR86 148 aa13.1□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Pcnx1Q9QYC1 2344 aa13.1□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Trav13d-4A0A0G2JFX3 110 aa13.1□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Rnf138Q9CQE0 245 aaKnown RBP13.1□□□□□ -0.31
Shroom3-201ENSMUST00000113051 COA4Q8BT51 87 aa13.09□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Fam24aQ8CF27 98 aa13.09□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Ighv1-52A0A0A6YXC3 117 aa13.09□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Gm10881P01642 115 aa13.09□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Znf664Q4VA44 261 aa13.09□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Srsf2Q62093 221 aaKnown RBP13.09□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Olfr312Q7TRZ9 308 aa13.09□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Mapk1ip1Q9D7G9 263 aa13.09□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Zfp951A0A087WRH0 451 aa13.09□□□□□ -0.31
Shroom3-201ENSMUST00000113051 U90926O08546 118 aa13.09□□□□□ -0.31
Shroom3-201ENSMUST00000113051 SprnQ8BWU1 147 aa13.09□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Reg3bP35230 175 aa13.09□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Cacna1gQ5SUF7 2381 aa13.08□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Eml5Q8BQM8 1977 aa13.08□□□□□ -0.31
Shroom3-201ENSMUST00000113051 Qrich2A0A140LIY9 2337 aa13.08□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Rpl18aP62717 176 aaKnown RBP13.08□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Igkv3-10A0A0G2JGN0 119 aa13.08□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Ang3P97802 145 aa13.08□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Tmem131O70472 1877 aa13.08□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Cd33Q63994 403 aa13.08□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Atp6v0e2Q91XE7 81 aa13.08□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Fstl3Q9EQC7 256 aa13.08□□□□□ -0.32
Shroom3-201ENSMUST00000113051 LtbP41155 306 aa13.07□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Gm17677B3GLJ5 116 aa13.07□□□□□ -0.32
Shroom3-201ENSMUST00000113051 A730015C16RikQ8C992 119 aa13.07□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Prpf8Q99PV0 2335 aaKnown RBP13.06□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Kif26aQ52KG5 1881 aa13.06□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Trav14n-2A0A0G2JDF5 121 aa13.06□□□□□ -0.32
Shroom3-201ENSMUST00000113051 P01750 117 aa13.06□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Fancd2osQ9D4K4 178 aa13.06□□□□□ -0.32
Shroom3-201ENSMUST00000113051 LenepQ9WVB6 61 aa13.06□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Gm3618D3Z4P5 127 aa13.06□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Gm20726G3UX18 150 aa13.06□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Ndufa12Q7TMF3 145 aaKnown RBP13.06□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Gm9949Q8C9F4 104 aa13.06□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Trav14-2A0A075B694 121 aa13.06□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Ighv8-8A0A0A6YXQ0 119 aa13.06□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Gm6034E9Q101 117 aa13.06□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Gm19684G3UZ45 117 aa13.06□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Gata1P17679 413 aa13.06□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Olfr313Q5NC55 308 aa13.06□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Vwa8Q8CC88 1905 aa13.05□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Gm17472A0A075B683 117 aa13.05□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Igkv8-18A0A0B4J1J3 123 aa13.05□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Sh2d1aO88890 126 aa13.05□□□□□ -0.32
Shroom3-201ENSMUST00000113051 Ubl5Q9EPV8 73 aa13.04□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms