RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 U90926O08546 118 aa11.93□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Trav14d-1A0A075B6B1 121 aa11.93□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Pglyrp1O88593 182 aa11.93□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 P01756 117 aa11.93□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 P01757 117 aa11.93□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 CrygbP04344 175 aa11.93□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Tln2Q71LX4 2375 aa11.93□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 MdfiP70331 251 aa11.93□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 PemtQ61907 199 aa11.93□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 BC048562Q80ZQ7 204 aa11.93□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Gm26558Q8BLW8 286 aa11.93□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Ube2cQ9D1C1 179 aa11.93□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Nbl1Q61477 178 aa11.92□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 A530064D06RikQ8BNV8 229 aa11.92□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Foxi1Q922I5 372 aa11.92□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Pip4p1Q3TWL2 284 aa11.92□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Srsf2Q62093 221 aaKnown RBP11.92□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Nckap5E9QAE1 1909 aa11.92□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 PifoQ9D9W1 207 aa11.92□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Cd24P24807 76 aa11.92□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Ncor2Q9WU42 2472 aaKnown RBP11.91□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Crybg1A0A0G2JG52 2065 aa11.91□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Pcnx1Q9QYC1 2344 aa11.91□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Gm5129F6YHA9 99 aa11.91□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Atp6v0e2Q91XE7 81 aa11.91□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Igkv3-5A0A140T8M6 119 aa11.91□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Gm4744D3Z3S5 154 aa11.91□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Ighv1-19A0A0A6YWX0 117 aa11.91□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Ighv12-3A0A075B5T1 117 aa11.9□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Carhsp1Q9CR86 148 aa11.9□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Pcdh15Q99PJ1 1943 aa11.9□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Id3P41133 119 aa11.9□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Samd5Q3V1H9 173 aa11.9□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Higd2aQ9CQJ1 106 aa11.9□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Cysrt1Q9D1E4 142 aa11.9□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Spry4Q9WTP2 300 aa11.9□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Eml5Q8BQM8 1977 aa11.9□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Trbv14A0A140T8L9 115 aa11.9□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Inafm2A0A1L1STD6 152 aa11.9□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 P01750 117 aa11.9□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Cox17P56394 63 aa11.9□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Bex1Q9R224 128 aa11.9□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Ncor1Q60974 2453 aa11.9□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Plxnb1Q8CJH3 2119 aa11.9□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Nsun4C4P6S0 806 aaKnown RBP11.9□□□□□ -0.5
Ccdc50-203ENSMUST00000100026 Zfp951A0A087WRH0 451 aa11.9□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Mrps12O35680 139 aa11.9□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 4933414I15RikQ9D4D5 133 aa11.9□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Bcl6bO88282 474 aa11.89□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Trav3-1Q5R1I8 114 aa11.89□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Vwa8Q8CC88 1905 aa11.89□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Igkv8-18A0A0B4J1J3 123 aa11.89□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Igkv1-122A0A140T8M9 119 aa11.89□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Gm6034E9Q101 117 aa11.89□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Gm19684G3UZ45 117 aa11.89□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Tmem14cQ9CQN6 114 aa11.89□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Ighv1-12A0A0A6YXJ9 117 aa11.89□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Gm28269A0A087WSG3 125 aa11.89□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Timm17aQ9Z0V8 171 aa11.89□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Rspo1Q9Z132 265 aa11.89□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Gm20517G3UVU6 152 aa11.88□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 BC035044E0CXF8 138 aa11.88□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Ccl17F6R5P4 103 aa11.88□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Rmi2Q3UPE3 149 aa11.88□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Tm2d2Q8R0I4 213 aa11.88□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Defa27F2Z403 93 aa11.88□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Lect2O88803 151 aa11.88□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 9130213A22RikQ3V3T2 120 aa11.88□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Xcl1P47993 114 aa11.88□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 4930415O20RikQ8CDT5 131 aa11.88□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Lage3Q9CR70 148 aa11.88□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Reg3bP35230 175 aa11.88□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Wfdc9Q3UW41 83 aa11.88□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Klhdc3Q8VEM9 382 aa11.88□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Igkv2-137A0A0B4J1H6 120 aa11.87□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Igkv3-10A0A0G2JGN0 119 aa11.87□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Insl3O09107 122 aa11.87□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 P01793 123 aa11.87□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Il22ra2Q80XF5 230 aa11.87□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Tmem131O70472 1877 aa11.87□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Ifitm1Q9D103 106 aa11.87□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Ubl5Q9EPV8 73 aa11.87□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Rnase1P00683 149 aa11.86□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Trip12G5E870 2025 aaKnown RBP11.86□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 4930442H23RikQ9D5G7 103 aa11.86□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Defb29Q8BGW9 78 aa11.86□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Cend1Q9JKC6 149 aa11.86□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Ube2aQ9Z255 152 aa11.86□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 SprnQ8BWU1 147 aa11.85□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Cfap126Q6P8X9 189 aa11.85□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Trav14n-2A0A0G2JDF5 121 aa11.85□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Nxph4G3X9N5 304 aa11.85□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Gm10735Q3US96 136 aa11.85□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Pom121l2Q5SW25 972 aa11.85□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Trav14-2A0A075B694 121 aa11.85□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Gm15557A6PWY0 234 aa11.85□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Olfr312Q7TRZ9 308 aa11.85□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Pxt1Q8K459 51 aa11.85□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 B9d2Q3UK10 175 aa11.84□□□□□ -0.51
Ccdc50-203ENSMUST00000100026 Mapk1ip1Q9D7G9 263 aa11.84□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 52.6 ms