RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Ighv14-1A0A075B5R4 117 aa17.2■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Tctex1d4Q8CDY7 219 aa17.2■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Card19Q9D1I2 183 aa17.2■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Vmn1r63Q9EPT1 300 aa17.2■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Gm16442D3YZG3 307 aa17.19■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Ccdc71lE9Q4T4 218 aa17.19■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Krtap24-1G3X9A2 248 aa17.19■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Pmis2Q497Q9 96 aa17.19■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Trbv14A0A140T8L9 115 aa17.19■□□□□ 0.34
Upf3a-201ENSMUST00000043767 P01793 123 aa17.19■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Olfr1012Q8VFJ7 311 aa17.19■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Dynlrb2Q9DAJ5 96 aa17.19■□□□□ 0.34
Upf3a-201ENSMUST00000043767 CtrlQ9ER05 264 aa17.19■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Trdv2-1A0A0G2JGB9 116 aa17.18■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Olfr1185-ps1F6XP16 303 aa17.18■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Gm20517G3UVU6 152 aa17.18■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Trdv2-2Q5R1A4 116 aa17.18■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Obox8V9GWY9 217 aa17.18■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Gm5878E9PUB3 99 aa17.17■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Zfp248Q640N4 576 aa17.17■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Fxyd4Q9D2W0 88 aa17.17■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Trappc1Q5NCF2 145 aa17.17■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Defa22Q8C1N8 93 aa17.17■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Nat6Q9R123 314 aa17.17■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Ang5Q5GAN1 145 aa17.16■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Mrpl53Q9D1H8 118 aaKnown RBP17.16■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Gm15294V9GXA7 121 aa17.16■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Tmem141A2AJB2 108 aa17.16■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Gm33815A0A087WNV3 176 aa17.15■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Gm29644A0A087WPG2 191 aa17.15■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Trav14n-2A0A0G2JDF5 121 aa17.15■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Gm28305F6U473 122 aa17.15■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Rnf24Q8BGI1 148 aa17.15■□□□□ 0.34
Upf3a-201ENSMUST00000043767 Igkv4-69A0A0B4J1I6 116 aa17.14■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Adam8Q05910 826 aa17.14■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Cd33Q63994 403 aa17.14■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Olfr1367Q8VFG2 316 aa17.14■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Tomm6Q9CQN3 74 aa17.14■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Sec11aQ9R0P6 179 aa17.14■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Fn1P11276 2477 aaKnown RBP17.14■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Igkv4-81A0A0G2JEY5 119 aa17.14■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Defa35E9QLQ1 93 aa17.14■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Psmg4P0C7N9 123 aa17.14■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Krtap26-1Q9D7N2 215 aa17.14■□□□□ 0.33
Upf3a-201ENSMUST00000043767 GlmpQ9JHJ3 404 aa17.14■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Nsd1O88491 2588 aaKnown RBP17.14■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Igkv20-101-2A0A0G2JDU3 113 aa17.13■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Gm2564F6Z9S8 108 aa17.13■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Ccl19O70460 108 aa17.13■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Tnfrsf9P20334 256 aa17.13■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Ighv2-7A0A075B5Q8 116 aa17.12■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Tcrg-V6A0A075B5Y8 134 aa17.12■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Odf1Q61999 247 aa17.12■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Clec4b2Q67DU8 208 aa17.12■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Tex48Q9DA81 110 aa17.12■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Rabac1Q9Z0S9 185 aa17.12■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Gm5426J3QNM7 103 aa17.12■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Itgb1bp1O35671 200 aa17.12■□□□□ 0.33
Upf3a-201ENSMUST00000043767 SstP60041 116 aa17.12■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Gm5105Q8C6Y9 112 aa17.12■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Gm10118Q8C8J5 116 aa17.12■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Olfr1431Q8VF59 312 aa17.12■□□□□ 0.33
Upf3a-201ENSMUST00000043767 CnfnQ6PCW6 111 aa17.11■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Hivep1Q03172 2688 aa17.11■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Trav16nA0A075B634 117 aa17.11■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Trbv17A0A140T8P8 114 aa17.11■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Fhl2O70433 279 aa17.11■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Znf239P24399 201 aa17.11■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Timm8bP62077 83 aaKnown RBP17.11■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Ighv1-12A0A0A6YXJ9 117 aa17.1■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Ceacam15A0A0B4J1L0 234 aa17.1■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Runx1Q03347 451 aa17.1■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Muc15Q8C6Z1 331 aa17.1■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Tctex1d2Q9CQ66 144 aa17.09■□□□□ 0.33
Upf3a-201ENSMUST00000043767 AhspQ9CY02 102 aa17.09■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Ighv1-82A0A0G2JEU7 117 aa17.09■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Ighv1-62-3P01754 117 aa17.09■□□□□ 0.33
Upf3a-201ENSMUST00000043767 H2-DMb1P35737 261 aa17.09■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Gm1968Q3T9I3 115 aa17.09■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Tex15F8VPN2 2785 aa17.08■□□□□ 0.33
Upf3a-201ENSMUST00000043767 QrfpQ8CE23 124 aa17.08■□□□□ 0.33
Upf3a-201ENSMUST00000043767 Ighv3-8A0A075B5T0 131 aa17.08■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Igkv4-70A0A0B4J1I5 116 aa17.08■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Gm45623A0A1B0GSF6 103 aa17.08■□□□□ 0.32
Upf3a-201ENSMUST00000043767 CrxO54751 299 aa17.08■□□□□ 0.32
Upf3a-201ENSMUST00000043767 P01750 117 aa17.08■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Fhl1P97447 280 aaKnown RBP17.08■□□□□ 0.32
Upf3a-201ENSMUST00000043767 BtcQ05928 177 aa17.08■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Rasl10aQ8K5A4 203 aa17.08■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Ighv1-64A0A075B5X3 117 aa17.07■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Gm45521A0A1B0GRK0 198 aa17.07■□□□□ 0.32
Upf3a-201ENSMUST00000043767 P01791 123 aa17.07■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Tctex1d1Q9D5I4 173 aa17.07■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Josd1Q9DBJ6 202 aa17.07■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Hspb8Q9JK92 196 aa17.07■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Trav9-2A0A075B647 113 aa17.06■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Trav9-4A0A0B4J1K2 113 aa17.06■□□□□ 0.32
Upf3a-201ENSMUST00000043767 P01739 132 aa17.06■□□□□ 0.32
Upf3a-201ENSMUST00000043767 TroQ6DIC6 2087 aa17.06■□□□□ 0.32
Upf3a-201ENSMUST00000043767 Q9DAB9 146 aa17.06■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 91.6 ms