RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Wfdc9Q3UW41 83 aa6.56□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Tmem52Q9D702 196 aa6.56□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Rpl36aP83882 106 aaKnown RBP6.56□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Gpr82Q8BZR0 328 aa6.56□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Igkv4-81A0A0G2JEY5 119 aa6.56□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 1700056E22RikF7CNM6 234 aa6.56□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 TcraP01849 138 aa6.56□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Cd69P37217 199 aa6.56□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Isg15Q64339 161 aaKnown RBP6.56□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Gm26566Q8CAC1 153 aa6.56□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Gm9925F6T2U3 160 aa6.56□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Igkv1-99F6XWB2 120 aa6.56□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 H1fxQ80ZM5 188 aa6.56□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Cd99Q8VCN6 175 aa6.56□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Card19Q9D1I2 183 aa6.56□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 P01643 108 aa6.56□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Bex1Q9R224 128 aa6.56□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Chd7A2AJK6 2986 aaKnown RBP6.55□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Tmem238A9JSM3 176 aa6.55□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Gm12845A0A0N4SUM5 588 aa6.55□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Odf3l1Q810P2 275 aa6.55□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Ighv1-64A0A075B5X3 117 aa6.55□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 P01727 129 aa6.55□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 CrygbP04344 175 aa6.55□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Tex26Q0VB26 296 aa6.55□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Tmem14cQ9CQN6 114 aa6.55□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Higd1aQ9JLR9 95 aa6.55□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Trav14-2A0A075B694 121 aa6.55□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Gm9747Q810H1 104 aa6.55□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Tcrg-C1A0A075B5Z0 172 aa6.55□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Tcrg-C3L7N479 172 aa6.55□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Rpl32P62911 135 aaKnown RBP6.55□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Znf787Q8BIF9 381 aa6.55□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Gnb1lQ9EQ15 326 aa6.55□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 SetxA2AKX3 2646 aa6.54□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Dmrt3Q80WT2 476 aa6.54□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Tomm6Q9CQN3 74 aa6.54□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Gkn1Q9CR36 201 aa6.54□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Ifi27l2aQ8R412 90 aa6.54□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Gm10521E9PZK0 135 aa6.54□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Q8R092 253 aa6.54□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Gm7075D3Z497 112 aa6.54□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Ndufc2Q9CQ54 120 aa6.54□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Trav6-6A0A075B603 114 aa6.54□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 P01756 117 aa6.54□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 P01757 117 aa6.54□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Rasl10aQ8K5A4 203 aa6.54□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Ang5Q5GAN1 145 aa6.53□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 4930447F04RikA2AFR2 126 aa6.53□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Cited2O35740 269 aa6.53□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Hoxd3P09027 433 aa6.53□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Pcnx2Q5DU28 2122 aa6.53□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Gm2564F6Z9S8 108 aa6.53□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Ccl19O70460 108 aa6.53□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 A130051J06RikQ8CAU1 227 aa6.53□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Sptbn2Q68FG2 2388 aa6.53□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Igkv4-57-1A0A075B5M4 119 aa6.53□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Ighv5-9-1A0A0A6YVS4 126 aa6.53□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 P01739 132 aa6.53□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Gm9961Q8BNV2 113 aa6.53□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Ncor2Q9WU42 2472 aaKnown RBP6.53□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Igkv3-1A0A075B5P1 119 aa6.52□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Sprr3O09116 238 aa6.52□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 P01820 115 aa6.52□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Wfdc15bQ9JHY4 80 aa6.52□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Ighv1-52A0A0A6YXC3 117 aa6.52□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Igkv8-24A0A140T8P5 121 aa6.52□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Nat8b-psE0CYC6 232 aa6.52□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Znf239P24399 201 aa6.52□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Ndufa4l2Q4FZG9 87 aa6.52□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Ndufa4Q62425 82 aaKnown RBP6.52□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Slamf6Q9ET39 351 aa6.52□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 DscamQ9ERC8 2013 aa6.52□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Shisa9Q9CZN4 424 aa6.52□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Ighv1-50A0A075B5W1 117 aa6.52□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Tcte2E9PY37 120 aa6.52□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Gm11020F6ZGD5 61 aa6.52□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Rpl35aO55142 110 aa6.52□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Ccl24Q9JKC0 119 aa6.52□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Trbv30A0A0B4J1P1 111 aa6.52□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 P01750 117 aa6.52□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 P01896 185 aa6.52□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Vmo1Q5SXG7 201 aa6.52□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Tln1P26039 2541 aaKnown RBP6.52□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Ighv2-6A0A075B6A7 116 aa6.51□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Trav6n-6A0A075B6B2 114 aa6.51□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 P01791 123 aa6.51□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Vwc2lQ505H4 222 aa6.51□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Chac1Q8R3J5 223 aa6.51□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Leap2Q91V13 76 aa6.51□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 PerpQ9JK95 193 aa6.51□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Erdr1J3QMM0 206 aa6.51□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 P03985 172 aa6.51□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 FshbQ60687 130 aa6.51□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Hbb-bsA8DUK4 147 aa6.51□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Hbb-b1P02088 147 aa6.51□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Hist1h4aP62806 103 aaKnown RBP6.51□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Odf3Q920N1 254 aa6.51□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Gm21994F6T2D2 329 aa6.51□□□□□ -1.37
Sf3b1-201ENSMUST00000027127 Igll1P20764 209 aa6.51□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms