RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Reg3gO09049 174 aa7.24□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Defb3Q9WTL0 63 aa7.24□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Igkv4-58A0A0G2JGI6 119 aa7.24□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 P04942 107 aa7.24□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Tmem52Q9D702 196 aa7.24□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Gtsf1Q9DAN6 167 aa7.24□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Tanc1Q0VGY8 1856 aa7.24□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Ncor1Q60974 2453 aa7.23□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Pla2g5P97391 137 aa7.23□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Zc2hc1bQ9D534 172 aa7.23□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Igkv6-13A0A0G2JGY3 119 aa7.23□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 CtsgP28293 261 aa7.23□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Tmem213Q08EA8 116 aa7.23□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Tmem263Q9DAM7 115 aa7.23□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 P01792 123 aa7.23□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Tmem243B2RVB9 118 aa7.23□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Lst1O08843 95 aa7.23□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 SelenowP63300 88 aa7.23□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Bex1Q9R224 128 aa7.23□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Col4a3Q9QZS0 1669 aa7.22□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Cela2aP05208 271 aa7.22□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Chchd5Q9CQP3 110 aa7.22□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Fhl3Q9R059 289 aa7.22□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Ccl24Q9JKC0 119 aa7.22□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Trbv16A0A0B4J1H3 115 aa7.22□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Ly6c1P0CW02 131 aa7.22□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Ccl21aP84444 133 aa7.22□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Ccl21bP86792 133 aa7.22□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Ccl21cP86793 133 aa7.22□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Pou2af1Q64693 256 aa7.22□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Gm15217A2CG07 155 aa7.22□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Glrp1E9Q9S8 174 aa7.22□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 1500011B03RikQ3TTH7 73 aa7.22□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Tnrc6aQ3UHK8 1896 aaKnown RBP7.22□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Atp6v0e2Q91XE7 81 aa7.21□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Odf1Q61999 247 aa7.21□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Sox16Q62247 57 aa7.21□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Vopp1Q8R1C3 172 aa7.21□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 MplkipQ9D011 178 aa7.21□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Med12A2AGH6 2190 aa7.21□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Ighv1-77A0A0G2JGS9 117 aa7.21□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 P01739 132 aa7.21□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Igll1P20764 209 aa7.21□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 7420426K07RikQ3UX66 186 aa7.21□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Olfr311Q5NC59 308 aa7.21□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Cd33Q63994 403 aa7.21□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Zmat4Q8BZ94 229 aa7.21□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 9430069I07RikQ9CX21 111 aa7.21□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Brca1P48754 1812 aa7.21□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Abca4O35600 2310 aa7.21□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Col4a5Q63ZW6 1691 aa7.21□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Ighv1-4A0A075B5T4 117 aa7.21□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Trbv14A0A140T8L9 115 aa7.21□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Gm16503Q8C6M9 103 aa7.21□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Klk11Q9QYN3 276 aa7.21□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Gm5941Q497P9 117 aa7.2□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Ang5Q5GAN1 145 aa7.2□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Ntf4Q80VU4 209 aa7.2□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Fhl4Q8CDC8 279 aa7.2□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Tmem223Q9CQE2 199 aaKnown RBP7.2□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 UrahQ9CRB3 118 aa7.2□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Obox8V9GWY9 217 aa7.2□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Trav12d-3A0A075B6A4 115 aa7.2□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Trav9d-4A0A0G2JG37 103 aa7.2□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 E030018B13RikJ3QMS9 113 aa7.2□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 P01750 117 aa7.2□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Wfdc2Q9DAU7 174 aa7.2□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Zic4Q61467 341 aa7.2□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 4930415O20RikQ8CDT5 131 aa7.2□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Notch3Q61982 2318 aa7.2□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Tsc2Q61037 1814 aa7.2□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Q08AU9 97 aa7.2□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Fancd2osQ9D4K4 178 aa7.19□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Vsig4F6TUL9 280 aa7.19□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Gm19684G3UZ45 117 aa7.19□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Gp9O88186 177 aa7.19□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Eif4ebp1Q60876 117 aa7.19□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Ighv3-1A0A075B5S6 116 aa7.19□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Ighv8-8A0A0A6YXQ0 119 aa7.19□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 P01793 123 aa7.19□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Ube2bP63147 152 aa7.19□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 BC048562Q80ZQ7 204 aa7.19□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Gm11733Q8BQP1 125 aa7.19□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Ndufc1Q9CQY9 76 aa7.19□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Tnfrsf13bQ9ET35 249 aa7.19□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 P01789 122 aa7.19□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 P04943 107 aa7.19□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Gm26558Q8BLW8 286 aa7.19□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Gm9961Q8BNV2 113 aa7.19□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 BikO70337 150 aa7.18□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 P01794 123 aa7.18□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Tmem210Q9D2F0 147 aa7.18□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Lyg1Q9D7Q0 197 aa7.18□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Ramp1Q9WTJ5 148 aa7.18□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 P04944 107 aa7.18□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Spink12Q9D256 87 aa7.18□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Ighv8-4A0A0A6YW26 117 aa7.18□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Clec4b2Q67DU8 208 aa7.18□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Zc2hc1aQ8BJH1 324 aa7.18□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Zfp951A0A087WRH0 451 aa7.18□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms