RNA–Protein interactions for RNA: ENST00000640752.1

HADH-223, Transcript of hydroxyacyl-CoA dehydrogenase, human

TSL 5

Gene HADH, Length 5,948 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HADH-223	ENST00000640752	FLG	P20930	4061 aa	Predicted RBP	3.73	□□□□□ -1.81
HADH-223	ENST00000640752	KRTAP9-6	A0A140TA67	174 aa		3.73	□□□□□ -1.81
HADH-223	ENST00000640752	TNXB	P22105	4242 aa		3.71	□□□□□ -1.81
HADH-223	ENST00000640752	ABCA13	Q86UQ4	5058 aa		3.71	□□□□□ -1.82
HADH-223	ENST00000640752	LCE2A	Q5TA79	106 aa	Predicted RBP	3.69	□□□□□ -1.82
HADH-223	ENST00000640752	KRTAP20-1	Q3LI63	56 aa		3.66	□□□□□ -1.82
HADH-223	ENST00000640752	MT1A	P04731	61 aa		3.65	□□□□□ -1.83
HADH-223	ENST00000640752	LOC100996750	A0A140TA64	210 aa		3.65	□□□□□ -1.83
HADH-223	ENST00000640752	KRTAP4-3	Q9BYR4	195 aa		3.63	□□□□□ -1.83
HADH-223	ENST00000640752	LCE1A	Q5T7P2	110 aa		3.63	□□□□□ -1.83
HADH-223	ENST00000640752	LCE1B	Q5T7P3	118 aa		3.62	□□□□□ -1.83
HADH-223	ENST00000640752	LCE1D	Q5T752	114 aa		3.61	□□□□□ -1.83
HADH-223	ENST00000640752	RNF213	Q63HN8	5207 aa		3.58	□□□□□ -1.84
HADH-223	ENST00000640752	KRTAP6-3	Q3LI67	103 aa		3.58	□□□□□ -1.84
HADH-223	ENST00000640752	PRM1	P04553	51 aa		3.56	□□□□□ -1.84
HADH-223	ENST00000640752	KRTAP19-7	Q3SYF9	63 aa		3.56	□□□□□ -1.84
HADH-223	ENST00000640752	KRTAP2-3	P0C7H8	128 aa		3.54	□□□□□ -1.84
HADH-223	ENST00000640752	KRTAP2-4	Q9BYR9	128 aa		3.54	□□□□□ -1.84
HADH-223	ENST00000640752	FAT4	Q6V0I7	4981 aa		3.54	□□□□□ -1.84
HADH-223	ENST00000640752	KRTAP9-7	A8MTY7	169 aa		3.51	□□□□□ -1.85
HADH-223	ENST00000640752	LCE4A	Q5TA78	99 aa		3.51	□□□□□ -1.85
HADH-223	ENST00000640752	UBR4	Q5T4S7	5183 aa		3.5	□□□□□ -1.85
HADH-223	ENST00000640752	LCE5A	Q5TCM9	118 aa		3.46	□□□□□ -1.86
HADH-223	ENST00000640752	KRTAP2-1	Q9BYU5	128 aa		3.44	□□□□□ -1.86
HADH-223	ENST00000640752	SYNE2	Q8WXH0	6885 aa	Known RBP	3.43	□□□□□ -1.86
HADH-223	ENST00000640752	SYNE1	Q8NF91	8797 aa	Known RBP	3.41	□□□□□ -1.86
HADH-223	ENST00000640752	FSIP2	Q5CZC0	6907 aa		3.4	□□□□□ -1.86
HADH-223	ENST00000640752	HMCN2	Q8NDA2	5059 aa		3.4	□□□□□ -1.87
HADH-223	ENST00000640752	KRTAP2-2	Q9BYT5	123 aa		3.4	□□□□□ -1.87
HADH-223	ENST00000640752	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	3.37	□□□□□ -1.87
HADH-223	ENST00000640752	KRTAP4-9	Q9BYQ8	210 aa		3.35	□□□□□ -1.87
HADH-223	ENST00000640752	MUC2	Q02817	5179 aa		3.34	□□□□□ -1.87
HADH-223	ENST00000640752	KRTAP9-4	Q9BYQ2	154 aa		3.34	□□□□□ -1.88
HADH-223	ENST00000640752	KRTAP6-1	Q3LI64	71 aa		3.29	□□□□□ -1.88
HADH-223	ENST00000640752	KRTAP6-2	Q3LI66	62 aa		3.29	□□□□□ -1.88
HADH-223	ENST00000640752	LCE1C	Q5T751	118 aa		3.17	□□□□□ -1.9
HADH-223	ENST00000640752	LCE1E	Q5T753	118 aa		3.17	□□□□□ -1.9
HADH-223	ENST00000640752	LCE1F	Q5T754	118 aa		3.17	□□□□□ -1.9
HADH-223	ENST00000640752	OBSCN	Q5VST9	7968 aa		3.16	□□□□□ -1.9
HADH-223	ENST00000640752	KRTAP9-6	A8MVA2	160 aa		3.15	□□□□□ -1.91
HADH-223	ENST00000640752	KRTAP9-9	Q9BYP9	154 aa		3.06	□□□□□ -1.92
HADH-223	ENST00000640752	USH2A	O75445	5202 aa		2.93	□□□□□ -1.94
HADH-223	ENST00000640752	NEB	P20929	6669 aa		2.92	□□□□□ -1.94
HADH-223	ENST00000640752	KRTAP5-9	P26371	169 aa		2.9	□□□□□ -1.94
HADH-223	ENST00000640752	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	2.8	□□□□□ -1.96
HADH-223	ENST00000640752	SSPO	A2VEC9	5147 aa		2.78	□□□□□ -1.96
HADH-223	ENST00000640752	MACF1	Q9UPN3	7388 aa	Known RBP	2.77	□□□□□ -1.97
HADH-223	ENST00000640752	DST	Q03001	7570 aa	Known RBP	2.76	□□□□□ -1.97
HADH-223	ENST00000640752	KRTAP4-6	Q9BYQ5	205 aa		2.76	□□□□□ -1.97
HADH-223	ENST00000640752	KRTAP20-2	Q3LI61	65 aa		2.75	□□□□□ -1.97
HADH-223	ENST00000640752	KMT2D	O14686	5537 aa		2.69	□□□□□ -1.98
HADH-223	ENST00000640752	KRTAP5-4	Q6L8H1	288 aa		2.66	□□□□□ -1.98
HADH-223	ENST00000640752	GPR98	Q8WXG9	6306 aa		2.6	□□□□□ -1.99
HADH-223	ENST00000640752	KRTAP4-11	Q9BYQ6	195 aa		2.6	□□□□□ -1.99
HADH-223	ENST00000640752	MDN1	Q9NU22	5596 aa		2.59	□□□□□ -1.99
HADH-223	ENST00000640752	MUC12	Q9UKN1	5478 aa		2.51	□□□□□ -2.01
HADH-223	ENST00000640752	MUC19	Q7Z5P9	8384 aa		2.48	□□□□□ -2.01
HADH-223	ENST00000640752	KRTAP4-12	Q9BQ66	201 aa		2.47	□□□□□ -2.01
HADH-223	ENST00000640752	KRTAP4-2	Q9BYR5	136 aa		2.47	□□□□□ -2.01
HADH-223	ENST00000640752	KRTAP4-4	Q9BYR3	166 aa		2.46	□□□□□ -2.02
HADH-223	ENST00000640752	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.35	□□□□□ -2.03
HADH-223	ENST00000640752	KRTAP5-3	Q6L8H2	238 aa		2.31	□□□□□ -2.04
HADH-223	ENST00000640752	AHNAK2	Q8IVF2	5795 aa		2.2	□□□□□ -2.06
HADH-223	ENST00000640752	MUC5AC	P98088	5654 aa		2.15	□□□□□ -2.07
HADH-223	ENST00000640752	KRTAP5-8	O75690	187 aa		2.06	□□□□□ -2.08
HADH-223	ENST00000640752	HMCN1	Q96RW7	5635 aa		2.06	□□□□□ -2.08
HADH-223	ENST00000640752	PHGR1	C9JFL3	82 aa		1.95	□□□□□ -2.1
HADH-223	ENST00000640752	KRTAP5-2	Q701N4	177 aa		1.94	□□□□□ -2.1
HADH-223	ENST00000640752	KRTAP5-10	Q6L8G5	202 aa		1.9	□□□□□ -2.1
HADH-223	ENST00000640752	MUC5B	Q9HC84	5762 aa	Predicted RBP	1.87	□□□□□ -2.11
HADH-223	ENST00000640752	KRTAP5-11	Q6L8G4	156 aa		1.85	□□□□□ -2.11
HADH-223	ENST00000640752	AHNAK	Q09666	5890 aa	Known RBP	1.79	□□□□□ -2.12
HADH-223	ENST00000640752	KRTAP5-1	Q6L8H4	278 aa		1.71	□□□□□ -2.14
HADH-223	ENST00000640752	KRTAP21-2	Q3LI59	83 aa		1.63	□□□□□ -2.15
HADH-223	ENST00000640752	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	1.6	□□□□□ -2.15
HADH-223	ENST00000640752	KRTAP5-7	Q6L8G8	165 aa		1.55	□□□□□ -2.16
HADH-223	ENST00000640752	KRTAP21-1	Q3LI58	79 aa		1.46	□□□□□ -2.18
HADH-223	ENST00000640752	MUC16	Q8WXI7	14507 aa		1.09	□□□□□ -2.23

Retrieved 78 of 20,778 RNA–protein pairs in 355.5 ms