RNA–Protein interactions for RNA: ENST00000639589.1

PRICKLE1-213, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRICKLE1, Length 5,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-213ENST00000639589 MT4P47944 62 aa3.12□□□□□ -1.91
PRICKLE1-213ENST00000639589 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
PRICKLE1-213ENST00000639589 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
PRICKLE1-213ENST00000639589 MT1EP04732 61 aa3.1□□□□□ -1.91
PRICKLE1-213ENST00000639589 FLGP20930 4061 aaPredicted RBP3.09□□□□□ -1.91
PRICKLE1-213ENST00000639589 RNF213Q63HN8 5207 aa3.08□□□□□ -1.92
PRICKLE1-213ENST00000639589 MT1LQ93083 61 aa3.08□□□□□ -1.92
PRICKLE1-213ENST00000639589 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
PRICKLE1-213ENST00000639589 FAT4Q6V0I7 4981 aa3.05□□□□□ -1.92
PRICKLE1-213ENST00000639589 MT1MQ8N339 61 aa3.02□□□□□ -1.93
PRICKLE1-213ENST00000639589 SPRR5A0A1B0GTR4 108 aa3.01□□□□□ -1.93
PRICKLE1-213ENST00000639589 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
PRICKLE1-213ENST00000639589 HMCN2Q8NDA2 5059 aa3□□□□□ -1.93
PRICKLE1-213ENST00000639589 LCE1AQ5T7P2 110 aa2.99□□□□□ -1.93
PRICKLE1-213ENST00000639589 KRTAP4-7Q9BYR0 210 aa2.98□□□□□ -1.93
PRICKLE1-213ENST00000639589 UBR4Q5T4S7 5183 aa2.97□□□□□ -1.93
PRICKLE1-213ENST00000639589 KRTAP2-2Q9BYT5 123 aa2.97□□□□□ -1.93
PRICKLE1-213ENST00000639589 KRTAP2-1Q9BYU5 128 aa2.97□□□□□ -1.93
PRICKLE1-213ENST00000639589 SYNE2Q8WXH0 6885 aaKnown RBP2.95□□□□□ -1.94
PRICKLE1-213ENST00000639589 MT3P25713 68 aa2.95□□□□□ -1.94
PRICKLE1-213ENST00000639589 LCE4AQ5TA78 99 aa2.9□□□□□ -1.95
PRICKLE1-213ENST00000639589 KRTAP9-9Q9BYP9 154 aa2.88□□□□□ -1.95
PRICKLE1-213ENST00000639589 KRTAP9-4Q9BYQ2 154 aa2.88□□□□□ -1.95
PRICKLE1-213ENST00000639589 KRTAP4-12Q9BQ66 201 aa2.87□□□□□ -1.95
PRICKLE1-213ENST00000639589 LCE1DQ5T752 114 aa2.85□□□□□ -1.95
PRICKLE1-213ENST00000639589 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
PRICKLE1-213ENST00000639589 MT1AP04731 61 aa2.79□□□□□ -1.96
PRICKLE1-213ENST00000639589 KRTAP19-7Q3SYF9 63 aa2.79□□□□□ -1.96
PRICKLE1-213ENST00000639589 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
PRICKLE1-213ENST00000639589 KRTAP4-9Q9BYQ8 210 aa2.76□□□□□ -1.97
PRICKLE1-213ENST00000639589 FSIP2Q5CZC0 6907 aa2.76□□□□□ -1.97
PRICKLE1-213ENST00000639589 PRM1P04553 51 aa2.73□□□□□ -1.97
PRICKLE1-213ENST00000639589 LCE5AQ5TCM9 118 aa2.71□□□□□ -1.98
PRICKLE1-213ENST00000639589 NEBP20929 6669 aa2.66□□□□□ -1.98
PRICKLE1-213ENST00000639589 MUC2Q02817 5179 aa2.65□□□□□ -1.98
PRICKLE1-213ENST00000639589 KRTAP5-9P26371 169 aa2.63□□□□□ -1.99
PRICKLE1-213ENST00000639589 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
PRICKLE1-213ENST00000639589 KRTAP4-11Q9BYQ6 195 aa2.6□□□□□ -1.99
PRICKLE1-213ENST00000639589 SSPOA2VEC9 5147 aa2.58□□□□□ -2
PRICKLE1-213ENST00000639589 KRTAP6-1Q3LI64 71 aa2.57□□□□□ -2
PRICKLE1-213ENST00000639589 KRTAP6-2Q3LI66 62 aa2.57□□□□□ -2
PRICKLE1-213ENST00000639589 USH2AO75445 5202 aa2.49□□□□□ -2.01
PRICKLE1-213ENST00000639589 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
PRICKLE1-213ENST00000639589 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
PRICKLE1-213ENST00000639589 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
PRICKLE1-213ENST00000639589 MACF1Q9UPN3 7388 aaKnown RBP2.43□□□□□ -2.02
PRICKLE1-213ENST00000639589 KRTAP5-3Q6L8H2 238 aa2.42□□□□□ -2.02
PRICKLE1-213ENST00000639589 KRTAP9-6A8MVA2 160 aa2.41□□□□□ -2.02
PRICKLE1-213ENST00000639589 KRTAP20-2Q3LI61 65 aa2.34□□□□□ -2.03
PRICKLE1-213ENST00000639589 FCGBPQ9Y6R7 5405 aaPredicted RBP2.34□□□□□ -2.04
PRICKLE1-213ENST00000639589 KRTAP5-4Q6L8H1 288 aa2.31□□□□□ -2.04
PRICKLE1-213ENST00000639589 SYNE1Q8NF91 8797 aaKnown RBP2.26□□□□□ -2.05
PRICKLE1-213ENST00000639589 OBSCNQ5VST9 7968 aa2.2□□□□□ -2.06
PRICKLE1-213ENST00000639589 GPR98Q8WXG9 6306 aa2.17□□□□□ -2.06
PRICKLE1-213ENST00000639589 KMT2DO14686 5537 aa2.17□□□□□ -2.06
PRICKLE1-213ENST00000639589 MDN1Q9NU22 5596 aa2.15□□□□□ -2.07
PRICKLE1-213ENST00000639589 DSTQ03001 7570 aaKnown RBP2.08□□□□□ -2.08
PRICKLE1-213ENST00000639589 KRTAP5-5Q701N2 237 aaPredicted RBP1.98□□□□□ -2.09
PRICKLE1-213ENST00000639589 MUC12Q9UKN1 5478 aa1.95□□□□□ -2.1
PRICKLE1-213ENST00000639589 AHNAK2Q8IVF2 5795 aa1.94□□□□□ -2.1
PRICKLE1-213ENST00000639589 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
PRICKLE1-213ENST00000639589 HMCN1Q96RW7 5635 aa1.9□□□□□ -2.11
PRICKLE1-213ENST00000639589 MUC5ACP98088 5654 aa1.84□□□□□ -2.11
PRICKLE1-213ENST00000639589 KRTAP5-8O75690 187 aa1.84□□□□□ -2.11
PRICKLE1-213ENST00000639589 KRTAP5-2Q701N4 177 aa1.72□□□□□ -2.13
PRICKLE1-213ENST00000639589 KRTAP5-11Q6L8G4 156 aa1.69□□□□□ -2.14
PRICKLE1-213ENST00000639589 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
PRICKLE1-213ENST00000639589 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
PRICKLE1-213ENST00000639589 KRTAP5-7Q6L8G8 165 aa1.66□□□□□ -2.14
PRICKLE1-213ENST00000639589 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.15
PRICKLE1-213ENST00000639589 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.15
PRICKLE1-213ENST00000639589 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
PRICKLE1-213ENST00000639589 KRTAP5-1Q6L8H4 278 aa1.55□□□□□ -2.16
PRICKLE1-213ENST00000639589 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
PRICKLE1-213ENST00000639589 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
PRICKLE1-213ENST00000639589 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
PRICKLE1-213ENST00000639589 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 40.3 ms