RNA–Protein interactions for RNA: ENST00000639496.1

KCNQ3-208, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 5

Gene KCNQ3, Length 4,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-208ENST00000639496 PKHD1P08F94 4074 aa3.27□□□□□ -1.89
KCNQ3-208ENST00000639496 MT1MQ8N339 61 aa3.25□□□□□ -1.89
KCNQ3-208ENST00000639496 KRTAP9-6A0A140TA67 174 aa3.24□□□□□ -1.89
KCNQ3-208ENST00000639496 MT4P47944 62 aa3.24□□□□□ -1.89
KCNQ3-208ENST00000639496 KRTAP4-7Q9BYR0 210 aa3.23□□□□□ -1.89
KCNQ3-208ENST00000639496 MUC17Q685J3 4493 aa3.19□□□□□ -1.9
KCNQ3-208ENST00000639496 FSIP2Q5CZC0 6907 aa3.17□□□□□ -1.9
KCNQ3-208ENST00000639496 RNF213Q63HN8 5207 aa3.13□□□□□ -1.91
KCNQ3-208ENST00000639496 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
KCNQ3-208ENST00000639496 LCE1DQ5T752 114 aa3.1□□□□□ -1.91
KCNQ3-208ENST00000639496 LPAP08519 4548 aa3.1□□□□□ -1.91
KCNQ3-208ENST00000639496 MUC2Q02817 5179 aa3.09□□□□□ -1.91
KCNQ3-208ENST00000639496 KRTAP20-1Q3LI63 56 aa3.09□□□□□ -1.91
KCNQ3-208ENST00000639496 FLGP20930 4061 aaPredicted RBP3.09□□□□□ -1.92
KCNQ3-208ENST00000639496 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.08□□□□□ -1.92
KCNQ3-208ENST00000639496 KRTAP9-7A8MTY7 169 aa3.08□□□□□ -1.92
KCNQ3-208ENST00000639496 TNXBP22105 4242 aa3.07□□□□□ -1.92
KCNQ3-208ENST00000639496 FAT4Q6V0I7 4981 aa3.06□□□□□ -1.92
KCNQ3-208ENST00000639496 MT1AP04731 61 aa3.06□□□□□ -1.92
KCNQ3-208ENST00000639496 LCE1AQ5T7P2 110 aa3.06□□□□□ -1.92
KCNQ3-208ENST00000639496 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
KCNQ3-208ENST00000639496 KRTAP4-3Q9BYR4 195 aa3.04□□□□□ -1.92
KCNQ3-208ENST00000639496 KRTAP19-7Q3SYF9 63 aa3.04□□□□□ -1.92
KCNQ3-208ENST00000639496 KRTAP6-3Q3LI67 103 aa3.03□□□□□ -1.92
KCNQ3-208ENST00000639496 SYNE2Q8WXH0 6885 aaKnown RBP3.02□□□□□ -1.93
KCNQ3-208ENST00000639496 KRTAP2-3P0C7H8 128 aa2.99□□□□□ -1.93
KCNQ3-208ENST00000639496 KRTAP2-4Q9BYR9 128 aa2.99□□□□□ -1.93
KCNQ3-208ENST00000639496 PRM1P04553 51 aa2.97□□□□□ -1.93
KCNQ3-208ENST00000639496 LCE5AQ5TCM9 118 aa2.94□□□□□ -1.94
KCNQ3-208ENST00000639496 KRTAP2-1Q9BYU5 128 aa2.93□□□□□ -1.94
KCNQ3-208ENST00000639496 HMCN2Q8NDA2 5059 aa2.92□□□□□ -1.94
KCNQ3-208ENST00000639496 LCE4AQ5TA78 99 aa2.9□□□□□ -1.94
KCNQ3-208ENST00000639496 KRTAP2-2Q9BYT5 123 aa2.9□□□□□ -1.95
KCNQ3-208ENST00000639496 MACF1Q9UPN3 7388 aaKnown RBP2.86□□□□□ -1.95
KCNQ3-208ENST00000639496 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
KCNQ3-208ENST00000639496 KRTAP9-4Q9BYQ2 154 aa2.83□□□□□ -1.96
KCNQ3-208ENST00000639496 KRTAP4-9Q9BYQ8 210 aa2.8□□□□□ -1.96
KCNQ3-208ENST00000639496 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
KCNQ3-208ENST00000639496 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.96
KCNQ3-208ENST00000639496 KRTAP6-1Q3LI64 71 aa2.77□□□□□ -1.97
KCNQ3-208ENST00000639496 DSTQ03001 7570 aaKnown RBP2.76□□□□□ -1.97
KCNQ3-208ENST00000639496 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
KCNQ3-208ENST00000639496 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
KCNQ3-208ENST00000639496 USH2AO75445 5202 aa2.72□□□□□ -1.97
KCNQ3-208ENST00000639496 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
KCNQ3-208ENST00000639496 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
KCNQ3-208ENST00000639496 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
KCNQ3-208ENST00000639496 FCGBPQ9Y6R7 5405 aaPredicted RBP2.68□□□□□ -1.98
KCNQ3-208ENST00000639496 KRTAP5-3Q6L8H2 238 aa2.68□□□□□ -1.98
KCNQ3-208ENST00000639496 KMT2DO14686 5537 aa2.66□□□□□ -1.98
KCNQ3-208ENST00000639496 KRTAP9-6A8MVA2 160 aa2.64□□□□□ -1.99
KCNQ3-208ENST00000639496 MUC19Q7Z5P9 8384 aa2.59□□□□□ -2
KCNQ3-208ENST00000639496 MDN1Q9NU22 5596 aa2.57□□□□□ -2
KCNQ3-208ENST00000639496 NEBP20929 6669 aa2.56□□□□□ -2
KCNQ3-208ENST00000639496 KRTAP5-9P26371 169 aa2.5□□□□□ -2.01
KCNQ3-208ENST00000639496 SSPOA2VEC9 5147 aa2.39□□□□□ -2.03
KCNQ3-208ENST00000639496 KRTAP20-2Q3LI61 65 aa2.36□□□□□ -2.03
KCNQ3-208ENST00000639496 MUC12Q9UKN1 5478 aa2.36□□□□□ -2.03
KCNQ3-208ENST00000639496 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
KCNQ3-208ENST00000639496 KRTAP4-11Q9BYQ6 195 aa2.23□□□□□ -2.05
KCNQ3-208ENST00000639496 KRTAP5-4Q6L8H1 288 aa2.19□□□□□ -2.06
KCNQ3-208ENST00000639496 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
KCNQ3-208ENST00000639496 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
KCNQ3-208ENST00000639496 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
KCNQ3-208ENST00000639496 MUC5ACP98088 5654 aa2.03□□□□□ -2.08
KCNQ3-208ENST00000639496 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.08
KCNQ3-208ENST00000639496 KRTAP5-5Q701N2 237 aaPredicted RBP1.96□□□□□ -2.1
KCNQ3-208ENST00000639496 MUC5BQ9HC84 5762 aaPredicted RBP1.86□□□□□ -2.11
KCNQ3-208ENST00000639496 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
KCNQ3-208ENST00000639496 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
KCNQ3-208ENST00000639496 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
KCNQ3-208ENST00000639496 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
KCNQ3-208ENST00000639496 KRTAP5-1Q6L8H4 278 aa1.63□□□□□ -2.15
KCNQ3-208ENST00000639496 KRTAP5-7Q6L8G8 165 aa1.62□□□□□ -2.15
KCNQ3-208ENST00000639496 KRTAP5-10Q6L8G5 202 aa1.61□□□□□ -2.15
KCNQ3-208ENST00000639496 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
KCNQ3-208ENST00000639496 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
KCNQ3-208ENST00000639496 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 140.5 ms