RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 LCE2DQ5TA82 110 aaPredicted RBP5.19□□□□□ -1.58
HNRNPU-217ENST00000638952 KRTAP19-6Q3LI70 58 aa5.17□□□□□ -1.58
HNRNPU-217ENST00000638952 LCE1BQ5T7P3 118 aa5.13□□□□□ -1.59
HNRNPU-217ENST00000638952 ABCA13Q86UQ4 5058 aa5.13□□□□□ -1.59
HNRNPU-217ENST00000638952 KRTAP19-7Q3SYF9 63 aa5.11□□□□□ -1.59
HNRNPU-217ENST00000638952 EPPK1P58107 5090 aaKnown RBP5.08□□□□□ -1.6
HNRNPU-217ENST00000638952 LCE1DQ5T752 114 aa5.06□□□□□ -1.6
HNRNPU-217ENST00000638952 HMCN2Q8NDA2 5059 aa5.05□□□□□ -1.6
HNRNPU-217ENST00000638952 MT4P47944 62 aa5.04□□□□□ -1.6
HNRNPU-217ENST00000638952 KRTAP2-3P0C7H8 128 aa5.03□□□□□ -1.6
HNRNPU-217ENST00000638952 KRTAP2-4Q9BYR9 128 aa5.03□□□□□ -1.6
HNRNPU-217ENST00000638952 KRTAP2-1Q9BYU5 128 aa5.03□□□□□ -1.6
HNRNPU-217ENST00000638952 FAT4Q6V0I7 4981 aa5.01□□□□□ -1.61
HNRNPU-217ENST00000638952 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
HNRNPU-217ENST00000638952 RNF213Q63HN8 5207 aa4.93□□□□□ -1.62
HNRNPU-217ENST00000638952 MT1AP04731 61 aa4.92□□□□□ -1.62
HNRNPU-217ENST00000638952 LCE2AQ5TA79 106 aaPredicted RBP4.91□□□□□ -1.62
HNRNPU-217ENST00000638952 KRTAP9-2Q9BYQ4 174 aa4.85□□□□□ -1.63
HNRNPU-217ENST00000638952 UBR4Q5T4S7 5183 aa4.85□□□□□ -1.63
HNRNPU-217ENST00000638952 KRTAP9-6A8MVA2 160 aa4.84□□□□□ -1.63
HNRNPU-217ENST00000638952 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
HNRNPU-217ENST00000638952 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
HNRNPU-217ENST00000638952 FSIP2Q5CZC0 6907 aa4.73□□□□□ -1.65
HNRNPU-217ENST00000638952 KRTAP6-2Q3LI66 62 aa4.72□□□□□ -1.65
HNRNPU-217ENST00000638952 KRTAP6-1Q3LI64 71 aa4.71□□□□□ -1.66
HNRNPU-217ENST00000638952 SYNE2Q8WXH0 6885 aaKnown RBP4.66□□□□□ -1.66
HNRNPU-217ENST00000638952 MUC2Q02817 5179 aa4.58□□□□□ -1.68
HNRNPU-217ENST00000638952 KRTAP9-4Q9BYQ2 154 aa4.57□□□□□ -1.68
HNRNPU-217ENST00000638952 KRTAP9-7A8MTY7 169 aa4.54□□□□□ -1.68
HNRNPU-217ENST00000638952 LCE1AQ5T7P2 110 aa4.47□□□□□ -1.69
HNRNPU-217ENST00000638952 KRTAP9-6A0A140TA67 174 aa4.46□□□□□ -1.7
HNRNPU-217ENST00000638952 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
HNRNPU-217ENST00000638952 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
HNRNPU-217ENST00000638952 LCE1FQ5T754 118 aa4.41□□□□□ -1.7
HNRNPU-217ENST00000638952 OBSCNQ5VST9 7968 aa4.39□□□□□ -1.71
HNRNPU-217ENST00000638952 KRTAP6-3Q3LI67 103 aa4.37□□□□□ -1.71
HNRNPU-217ENST00000638952 KRTAP20-1Q3LI63 56 aa4.34□□□□□ -1.71
HNRNPU-217ENST00000638952 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
HNRNPU-217ENST00000638952 LCE4AQ5TA78 99 aa4.27□□□□□ -1.73
HNRNPU-217ENST00000638952 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.21□□□□□ -1.74
HNRNPU-217ENST00000638952 KMT2DO14686 5537 aa4.21□□□□□ -1.74
HNRNPU-217ENST00000638952 USH2AO75445 5202 aa4.15□□□□□ -1.75
HNRNPU-217ENST00000638952 FCGBPQ9Y6R7 5405 aaPredicted RBP4.12□□□□□ -1.75
HNRNPU-217ENST00000638952 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
HNRNPU-217ENST00000638952 DSTQ03001 7570 aaKnown RBP3.99□□□□□ -1.77
HNRNPU-217ENST00000638952 SSPOA2VEC9 5147 aa3.92□□□□□ -1.78
HNRNPU-217ENST00000638952 MACF1Q9UPN3 7388 aaKnown RBP3.83□□□□□ -1.8
HNRNPU-217ENST00000638952 KRTAP5-9P26371 169 aa3.82□□□□□ -1.8
HNRNPU-217ENST00000638952 KRTAP4-6Q9BYQ5 205 aa3.79□□□□□ -1.8
HNRNPU-217ENST00000638952 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
HNRNPU-217ENST00000638952 MUC12Q9UKN1 5478 aa3.7□□□□□ -1.82
HNRNPU-217ENST00000638952 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
HNRNPU-217ENST00000638952 KRTAP5-5Q701N2 237 aaPredicted RBP3.66□□□□□ -1.82
HNRNPU-217ENST00000638952 NEBP20929 6669 aa3.66□□□□□ -1.82
HNRNPU-217ENST00000638952 MUC19Q7Z5P9 8384 aa3.63□□□□□ -1.83
HNRNPU-217ENST00000638952 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
HNRNPU-217ENST00000638952 KRTAP5-4Q6L8H1 288 aa3.4□□□□□ -1.87
HNRNPU-217ENST00000638952 KRTAP4-12Q9BQ66 201 aa3.38□□□□□ -1.87
HNRNPU-217ENST00000638952 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
HNRNPU-217ENST00000638952 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
HNRNPU-217ENST00000638952 MDN1Q9NU22 5596 aa3.27□□□□□ -1.89
HNRNPU-217ENST00000638952 KRTAP5-3Q6L8H2 238 aa2.94□□□□□ -1.94
HNRNPU-217ENST00000638952 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
HNRNPU-217ENST00000638952 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
HNRNPU-217ENST00000638952 KRTAP5-2Q701N4 177 aa2.71□□□□□ -1.98
HNRNPU-217ENST00000638952 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
HNRNPU-217ENST00000638952 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
HNRNPU-217ENST00000638952 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
HNRNPU-217ENST00000638952 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
HNRNPU-217ENST00000638952 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
HNRNPU-217ENST00000638952 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
HNRNPU-217ENST00000638952 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
HNRNPU-217ENST00000638952 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
HNRNPU-217ENST00000638952 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
HNRNPU-217ENST00000638952 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
HNRNPU-217ENST00000638952 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.06
HNRNPU-217ENST00000638952 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
HNRNPU-217ENST00000638952 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 6.9 ms