RNA–Protein interactions for RNA: ENST00000637736.1

CACNA1A-246, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-246ENST00000637736 KRTAP4-9Q9BYQ8 210 aa5.4□□□□□ -1.54
CACNA1A-246ENST00000637736 LRP2P98164 4655 aa5.4□□□□□ -1.55
CACNA1A-246ENST00000637736 MT1AP04731 61 aa5.38□□□□□ -1.55
CACNA1A-246ENST00000637736 KRTAP2-3P0C7H8 128 aa5.37□□□□□ -1.55
CACNA1A-246ENST00000637736 KRTAP2-4Q9BYR9 128 aa5.37□□□□□ -1.55
CACNA1A-246ENST00000637736 KRTAP2-1Q9BYU5 128 aa5.37□□□□□ -1.55
CACNA1A-246ENST00000637736 KRTAP19-2Q3LHN2 52 aa5.34□□□□□ -1.55
CACNA1A-246ENST00000637736 KRTAP9-6A0A140TA67 174 aa5.29□□□□□ -1.56
CACNA1A-246ENST00000637736 SYNE2Q8WXH0 6885 aaKnown RBP5.26□□□□□ -1.57
CACNA1A-246ENST00000637736 MUC17Q685J3 4493 aa5.24□□□□□ -1.57
CACNA1A-246ENST00000637736 KRTAP6-2Q3LI66 62 aa5.15□□□□□ -1.58
CACNA1A-246ENST00000637736 KRTAP19-7Q3SYF9 63 aa5.15□□□□□ -1.59
CACNA1A-246ENST00000637736 LCE4AQ5TA78 99 aa5.12□□□□□ -1.59
CACNA1A-246ENST00000637736 KRTAP9-7A8MTY7 169 aa5.06□□□□□ -1.6
CACNA1A-246ENST00000637736 KMT2CQ8NEZ4 4911 aaKnown RBP5.05□□□□□ -1.6
CACNA1A-246ENST00000637736 HYDINQ4G0P3 5121 aa5.03□□□□□ -1.6
CACNA1A-246ENST00000637736 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
CACNA1A-246ENST00000637736 KRTAP6-3Q3LI67 103 aa4.98□□□□□ -1.61
CACNA1A-246ENST00000637736 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
CACNA1A-246ENST00000637736 LCE2AQ5TA79 106 aaPredicted RBP4.95□□□□□ -1.62
CACNA1A-246ENST00000637736 RYR2Q92736 4967 aa4.94□□□□□ -1.62
CACNA1A-246ENST00000637736 HERC2O95714 4834 aa4.87□□□□□ -1.63
CACNA1A-246ENST00000637736 KRTAP2-2Q9BYT5 123 aa4.86□□□□□ -1.63
CACNA1A-246ENST00000637736 KIAA1109Q2LD37 5005 aa4.85□□□□□ -1.63
CACNA1A-246ENST00000637736 PCLOQ9Y6V0 5065 aa4.84□□□□□ -1.63
CACNA1A-246ENST00000637736 KRTAP9-9Q9BYP9 154 aa4.79□□□□□ -1.64
CACNA1A-246ENST00000637736 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.74□□□□□ -1.65
CACNA1A-246ENST00000637736 BIRC6Q9NR09 4857 aa4.68□□□□□ -1.66
CACNA1A-246ENST00000637736 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
CACNA1A-246ENST00000637736 HMCN2Q8NDA2 5059 aa4.59□□□□□ -1.67
CACNA1A-246ENST00000637736 HERC1Q15751 4861 aa4.51□□□□□ -1.69
CACNA1A-246ENST00000637736 SYNE1Q8NF91 8797 aaKnown RBP4.46□□□□□ -1.69
CACNA1A-246ENST00000637736 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
CACNA1A-246ENST00000637736 FSIP2Q5CZC0 6907 aa4.45□□□□□ -1.7
CACNA1A-246ENST00000637736 KRTAP20-2Q3LI61 65 aa4.44□□□□□ -1.7
CACNA1A-246ENST00000637736 EPPK1P58107 5090 aaKnown RBP4.41□□□□□ -1.7
CACNA1A-246ENST00000637736 ABCA13Q86UQ4 5058 aa4.23□□□□□ -1.73
CACNA1A-246ENST00000637736 OBSCNQ5VST9 7968 aa4.21□□□□□ -1.74
CACNA1A-246ENST00000637736 KRTAP4-4Q9BYR3 166 aa4.15□□□□□ -1.75
CACNA1A-246ENST00000637736 MUC2Q02817 5179 aa4.11□□□□□ -1.75
CACNA1A-246ENST00000637736 KRTAP4-6Q9BYQ5 205 aa4.09□□□□□ -1.75
CACNA1A-246ENST00000637736 FAT4Q6V0I7 4981 aa4.05□□□□□ -1.76
CACNA1A-246ENST00000637736 KRTAP4-12Q9BQ66 201 aa4.05□□□□□ -1.76
CACNA1A-246ENST00000637736 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
CACNA1A-246ENST00000637736 RNF213Q63HN8 5207 aa4.03□□□□□ -1.76
CACNA1A-246ENST00000637736 KRTAP5-9P26371 169 aa4□□□□□ -1.77
CACNA1A-246ENST00000637736 UBR4Q5T4S7 5183 aa3.97□□□□□ -1.77
CACNA1A-246ENST00000637736 KRTAP5-4Q6L8H1 288 aa3.79□□□□□ -1.8
CACNA1A-246ENST00000637736 DSTQ03001 7570 aaKnown RBP3.72□□□□□ -1.81
CACNA1A-246ENST00000637736 NEBP20929 6669 aa3.7□□□□□ -1.82
CACNA1A-246ENST00000637736 MACF1Q9UPN3 7388 aaKnown RBP3.69□□□□□ -1.82
CACNA1A-246ENST00000637736 KMT2DO14686 5537 aa3.69□□□□□ -1.82
CACNA1A-246ENST00000637736 FCGBPQ9Y6R7 5405 aaPredicted RBP3.49□□□□□ -1.85
CACNA1A-246ENST00000637736 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
CACNA1A-246ENST00000637736 USH2AO75445 5202 aa3.42□□□□□ -1.86
CACNA1A-246ENST00000637736 MUC19Q7Z5P9 8384 aa3.41□□□□□ -1.86
CACNA1A-246ENST00000637736 KRTAP5-3Q6L8H2 238 aa3.25□□□□□ -1.89
CACNA1A-246ENST00000637736 MDN1Q9NU22 5596 aa3.25□□□□□ -1.89
CACNA1A-246ENST00000637736 GPR98Q8WXG9 6306 aa3.17□□□□□ -1.9
CACNA1A-246ENST00000637736 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
CACNA1A-246ENST00000637736 MUC12Q9UKN1 5478 aa3.14□□□□□ -1.91
CACNA1A-246ENST00000637736 SSPOA2VEC9 5147 aa3.13□□□□□ -1.91
CACNA1A-246ENST00000637736 MUC5ACP98088 5654 aa2.99□□□□□ -1.93
CACNA1A-246ENST00000637736 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
CACNA1A-246ENST00000637736 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.95
CACNA1A-246ENST00000637736 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
CACNA1A-246ENST00000637736 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.99
CACNA1A-246ENST00000637736 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -1.99
CACNA1A-246ENST00000637736 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
CACNA1A-246ENST00000637736 HMCN1Q96RW7 5635 aa2.48□□□□□ -2.01
CACNA1A-246ENST00000637736 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
CACNA1A-246ENST00000637736 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
CACNA1A-246ENST00000637736 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
CACNA1A-246ENST00000637736 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
CACNA1A-246ENST00000637736 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.07
CACNA1A-246ENST00000637736 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
CACNA1A-246ENST00000637736 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms