RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 RYR3Q15413 4870 aa5.19□□□□□ -1.58
CACNA1A-225ENST00000636389 KRTAP17-1Q9BYP8 105 aa5.18□□□□□ -1.58
CACNA1A-225ENST00000636389 KRTAP19-6Q3LI70 58 aa5.16□□□□□ -1.58
CACNA1A-225ENST00000636389 MYCBP2O75592 4640 aa5.15□□□□□ -1.58
CACNA1A-225ENST00000636389 KRTAP20-1Q3LI63 56 aa5.1□□□□□ -1.59
CACNA1A-225ENST00000636389 SYNE2Q8WXH0 6885 aaKnown RBP5.08□□□□□ -1.6
CACNA1A-225ENST00000636389 HERC2O95714 4834 aa5.08□□□□□ -1.6
CACNA1A-225ENST00000636389 PCLOQ9Y6V0 5065 aa5.07□□□□□ -1.6
CACNA1A-225ENST00000636389 KRTAP4-9Q9BYQ8 210 aa5.07□□□□□ -1.6
CACNA1A-225ENST00000636389 KRTAP9-6A0A140TA67 174 aa4.93□□□□□ -1.62
CACNA1A-225ENST00000636389 HERC1Q15751 4861 aa4.9□□□□□ -1.63
CACNA1A-225ENST00000636389 UBR4Q5T4S7 5183 aa4.9□□□□□ -1.63
CACNA1A-225ENST00000636389 EPPK1P58107 5090 aaKnown RBP4.89□□□□□ -1.63
CACNA1A-225ENST00000636389 KRTAP2-3P0C7H8 128 aa4.88□□□□□ -1.63
CACNA1A-225ENST00000636389 KRTAP2-4Q9BYR9 128 aa4.88□□□□□ -1.63
CACNA1A-225ENST00000636389 KRTAP2-1Q9BYU5 128 aa4.88□□□□□ -1.63
CACNA1A-225ENST00000636389 HMCN2Q8NDA2 5059 aa4.86□□□□□ -1.63
CACNA1A-225ENST00000636389 KMT2CQ8NEZ4 4911 aaKnown RBP4.83□□□□□ -1.64
CACNA1A-225ENST00000636389 RNF213Q63HN8 5207 aa4.82□□□□□ -1.64
CACNA1A-225ENST00000636389 MT1AP04731 61 aa4.8□□□□□ -1.64
CACNA1A-225ENST00000636389 KRTAP6-2Q3LI66 62 aa4.78□□□□□ -1.65
CACNA1A-225ENST00000636389 KRTAP9-7A8MTY7 169 aa4.74□□□□□ -1.65
CACNA1A-225ENST00000636389 LRP2P98164 4655 aa4.73□□□□□ -1.65
CACNA1A-225ENST00000636389 LCE4AQ5TA78 99 aa4.73□□□□□ -1.65
CACNA1A-225ENST00000636389 MUC17Q685J3 4493 aa4.69□□□□□ -1.66
CACNA1A-225ENST00000636389 KRTAP19-2Q3LHN2 52 aa4.65□□□□□ -1.67
CACNA1A-225ENST00000636389 KRTAP6-1Q3LI64 71 aa4.57□□□□□ -1.68
CACNA1A-225ENST00000636389 KRTAP9-4Q9BYQ2 154 aa4.55□□□□□ -1.68
CACNA1A-225ENST00000636389 KRTAP19-7Q3SYF9 63 aa4.53□□□□□ -1.68
CACNA1A-225ENST00000636389 KRTAP9-9Q9BYP9 154 aa4.5□□□□□ -1.69
CACNA1A-225ENST00000636389 LCE2AQ5TA79 106 aaPredicted RBP4.5□□□□□ -1.69
CACNA1A-225ENST00000636389 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
CACNA1A-225ENST00000636389 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
CACNA1A-225ENST00000636389 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.33□□□□□ -1.72
CACNA1A-225ENST00000636389 USH2AO75445 5202 aa4.26□□□□□ -1.73
CACNA1A-225ENST00000636389 FAT4Q6V0I7 4981 aa4.24□□□□□ -1.73
CACNA1A-225ENST00000636389 KRTAP20-2Q3LI61 65 aa4.23□□□□□ -1.73
CACNA1A-225ENST00000636389 FSIP2Q5CZC0 6907 aa4.18□□□□□ -1.74
CACNA1A-225ENST00000636389 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
CACNA1A-225ENST00000636389 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
CACNA1A-225ENST00000636389 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
CACNA1A-225ENST00000636389 SSPOA2VEC9 5147 aa4.02□□□□□ -1.77
CACNA1A-225ENST00000636389 KRTAP4-4Q9BYR3 166 aa3.95□□□□□ -1.78
CACNA1A-225ENST00000636389 KRTAP4-6Q9BYQ5 205 aa3.92□□□□□ -1.78
CACNA1A-225ENST00000636389 MUC2Q02817 5179 aa3.89□□□□□ -1.79
CACNA1A-225ENST00000636389 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
CACNA1A-225ENST00000636389 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
CACNA1A-225ENST00000636389 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
CACNA1A-225ENST00000636389 KRTAP5-9P26371 169 aa3.49□□□□□ -1.85
CACNA1A-225ENST00000636389 MDN1Q9NU22 5596 aa3.49□□□□□ -1.85
CACNA1A-225ENST00000636389 FCGBPQ9Y6R7 5405 aaPredicted RBP3.47□□□□□ -1.85
CACNA1A-225ENST00000636389 KMT2DO14686 5537 aa3.45□□□□□ -1.86
CACNA1A-225ENST00000636389 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
CACNA1A-225ENST00000636389 MACF1Q9UPN3 7388 aaKnown RBP3.34□□□□□ -1.88
CACNA1A-225ENST00000636389 KRTAP5-4Q6L8H1 288 aa3.3□□□□□ -1.88
CACNA1A-225ENST00000636389 NEBP20929 6669 aa3.24□□□□□ -1.89
CACNA1A-225ENST00000636389 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
CACNA1A-225ENST00000636389 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
CACNA1A-225ENST00000636389 MUC12Q9UKN1 5478 aa3.12□□□□□ -1.91
CACNA1A-225ENST00000636389 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
CACNA1A-225ENST00000636389 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
CACNA1A-225ENST00000636389 HMCN1Q96RW7 5635 aa2.89□□□□□ -1.95
CACNA1A-225ENST00000636389 KRTAP5-3Q6L8H2 238 aa2.84□□□□□ -1.95
CACNA1A-225ENST00000636389 AHNAK2Q8IVF2 5795 aa2.79□□□□□ -1.96
CACNA1A-225ENST00000636389 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
CACNA1A-225ENST00000636389 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
CACNA1A-225ENST00000636389 KRTAP5-8O75690 187 aa2.63□□□□□ -1.99
CACNA1A-225ENST00000636389 KRTAP5-10Q6L8G5 202 aa2.52□□□□□ -2.01
CACNA1A-225ENST00000636389 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
CACNA1A-225ENST00000636389 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
CACNA1A-225ENST00000636389 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
CACNA1A-225ENST00000636389 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
CACNA1A-225ENST00000636389 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
CACNA1A-225ENST00000636389 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
CACNA1A-225ENST00000636389 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
CACNA1A-225ENST00000636389 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
CACNA1A-225ENST00000636389 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 108.7 ms