RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 LCE1AQ5T7P2 110 aa4.85□□□□□ -1.63
CLN5-208ENST00000636183 KRTAP4-9Q9BYQ8 210 aa4.84□□□□□ -1.64
CLN5-208ENST00000636183 RYR2Q92736 4967 aa4.8□□□□□ -1.64
CLN5-208ENST00000636183 HERC2O95714 4834 aa4.79□□□□□ -1.64
CLN5-208ENST00000636183 HYDINQ4G0P3 5121 aa4.76□□□□□ -1.65
CLN5-208ENST00000636183 BIRC6Q9NR09 4857 aa4.76□□□□□ -1.65
CLN5-208ENST00000636183 PCLOQ9Y6V0 5065 aa4.75□□□□□ -1.65
CLN5-208ENST00000636183 KIAA1109Q2LD37 5005 aa4.74□□□□□ -1.65
CLN5-208ENST00000636183 KRTAP2-3P0C7H8 128 aa4.73□□□□□ -1.65
CLN5-208ENST00000636183 KRTAP2-4Q9BYR9 128 aa4.73□□□□□ -1.65
CLN5-208ENST00000636183 LRP2P98164 4655 aa4.71□□□□□ -1.66
CLN5-208ENST00000636183 SYNE2Q8WXH0 6885 aaKnown RBP4.67□□□□□ -1.66
CLN5-208ENST00000636183 KRTAP19-2Q3LHN2 52 aa4.66□□□□□ -1.66
CLN5-208ENST00000636183 EPPK1P58107 5090 aaKnown RBP4.63□□□□□ -1.67
CLN5-208ENST00000636183 TNXBP22105 4242 aa4.6□□□□□ -1.67
CLN5-208ENST00000636183 MT1AP04731 61 aa4.58□□□□□ -1.68
CLN5-208ENST00000636183 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.57□□□□□ -1.68
CLN5-208ENST00000636183 FSIP2Q5CZC0 6907 aa4.57□□□□□ -1.68
CLN5-208ENST00000636183 KMT2CQ8NEZ4 4911 aaKnown RBP4.56□□□□□ -1.68
CLN5-208ENST00000636183 KRTAP6-3Q3LI67 103 aa4.56□□□□□ -1.68
CLN5-208ENST00000636183 FLGP20930 4061 aaPredicted RBP4.55□□□□□ -1.68
CLN5-208ENST00000636183 KRTAP2-2Q9BYT5 123 aa4.53□□□□□ -1.68
CLN5-208ENST00000636183 KRTAP2-1Q9BYU5 128 aa4.53□□□□□ -1.68
CLN5-208ENST00000636183 MUC17Q685J3 4493 aa4.52□□□□□ -1.69
CLN5-208ENST00000636183 LCE2AQ5TA79 106 aaPredicted RBP4.51□□□□□ -1.69
CLN5-208ENST00000636183 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
CLN5-208ENST00000636183 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
CLN5-208ENST00000636183 KRTAP19-7Q3SYF9 63 aa4.4□□□□□ -1.7
CLN5-208ENST00000636183 SYNE1Q8NF91 8797 aaKnown RBP4.37□□□□□ -1.71
CLN5-208ENST00000636183 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
CLN5-208ENST00000636183 KRTAP9-9Q9BYP9 154 aa4.31□□□□□ -1.72
CLN5-208ENST00000636183 KRTAP9-4Q9BYQ2 154 aa4.3□□□□□ -1.72
CLN5-208ENST00000636183 MUC2Q02817 5179 aa4.25□□□□□ -1.73
CLN5-208ENST00000636183 ABCA13Q86UQ4 5058 aa4.13□□□□□ -1.75
CLN5-208ENST00000636183 HMCN2Q8NDA2 5059 aa4.11□□□□□ -1.75
CLN5-208ENST00000636183 FAT4Q6V0I7 4981 aa4.11□□□□□ -1.75
CLN5-208ENST00000636183 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
CLN5-208ENST00000636183 UBR4Q5T4S7 5183 aa4.03□□□□□ -1.76
CLN5-208ENST00000636183 RNF213Q63HN8 5207 aa4.03□□□□□ -1.76
CLN5-208ENST00000636183 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
CLN5-208ENST00000636183 KRTAP9-6A8MVA2 160 aa3.87□□□□□ -1.79
CLN5-208ENST00000636183 KRTAP4-6Q9BYQ5 205 aa3.79□□□□□ -1.8
CLN5-208ENST00000636183 MACF1Q9UPN3 7388 aaKnown RBP3.78□□□□□ -1.8
CLN5-208ENST00000636183 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
CLN5-208ENST00000636183 KRTAP4-2Q9BYR5 136 aa3.76□□□□□ -1.81
CLN5-208ENST00000636183 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
CLN5-208ENST00000636183 DSTQ03001 7570 aaKnown RBP3.71□□□□□ -1.82
CLN5-208ENST00000636183 KRTAP4-11Q9BYQ6 195 aa3.69□□□□□ -1.82
CLN5-208ENST00000636183 NEBP20929 6669 aa3.67□□□□□ -1.82
CLN5-208ENST00000636183 FCGBPQ9Y6R7 5405 aaPredicted RBP3.48□□□□□ -1.85
CLN5-208ENST00000636183 KRTAP5-9P26371 169 aa3.46□□□□□ -1.86
CLN5-208ENST00000636183 USH2AO75445 5202 aa3.45□□□□□ -1.86
CLN5-208ENST00000636183 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
CLN5-208ENST00000636183 KMT2DO14686 5537 aa3.32□□□□□ -1.88
CLN5-208ENST00000636183 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
CLN5-208ENST00000636183 MUC19Q7Z5P9 8384 aa3.25□□□□□ -1.89
CLN5-208ENST00000636183 SSPOA2VEC9 5147 aa3.18□□□□□ -1.9
CLN5-208ENST00000636183 MDN1Q9NU22 5596 aa3.07□□□□□ -1.92
CLN5-208ENST00000636183 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
CLN5-208ENST00000636183 KRTAP5-3Q6L8H2 238 aa2.99□□□□□ -1.93
CLN5-208ENST00000636183 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
CLN5-208ENST00000636183 MUC12Q9UKN1 5478 aa2.96□□□□□ -1.94
CLN5-208ENST00000636183 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
CLN5-208ENST00000636183 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
CLN5-208ENST00000636183 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
CLN5-208ENST00000636183 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
CLN5-208ENST00000636183 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
CLN5-208ENST00000636183 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
CLN5-208ENST00000636183 KRTAP5-2Q701N4 177 aa2.22□□□□□ -2.05
CLN5-208ENST00000636183 KRTAP5-1Q6L8H4 278 aa2.15□□□□□ -2.06
CLN5-208ENST00000636183 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
CLN5-208ENST00000636183 KRTAP5-11Q6L8G4 156 aa2.1□□□□□ -2.07
CLN5-208ENST00000636183 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
CLN5-208ENST00000636183 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
CLN5-208ENST00000636183 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
CLN5-208ENST00000636183 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
CLN5-208ENST00000636183 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 495.5 ms