RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 FLGP20930 4061 aaPredicted RBP4.55□□□□□ -1.68
UBE3A-220ENST00000630424 KRTAP19-2Q3LHN2 52 aa4.54□□□□□ -1.68
UBE3A-220ENST00000630424 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
UBE3A-220ENST00000630424 MT1MQ8N339 61 aa4.46□□□□□ -1.7
UBE3A-220ENST00000630424 SPRR5A0A1B0GTR4 108 aa4.45□□□□□ -1.7
UBE3A-220ENST00000630424 MT3P25713 68 aa4.45□□□□□ -1.7
UBE3A-220ENST00000630424 MUC2Q02817 5179 aa4.45□□□□□ -1.7
UBE3A-220ENST00000630424 RNF213Q63HN8 5207 aa4.43□□□□□ -1.7
UBE3A-220ENST00000630424 KRTAP9-6A0A140TA67 174 aa4.43□□□□□ -1.7
UBE3A-220ENST00000630424 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.71
UBE3A-220ENST00000630424 LCE1BQ5T7P3 118 aa4.38□□□□□ -1.71
UBE3A-220ENST00000630424 KRTAP4-3Q9BYR4 195 aa4.35□□□□□ -1.71
UBE3A-220ENST00000630424 LCE1DQ5T752 114 aa4.35□□□□□ -1.71
UBE3A-220ENST00000630424 LOC100996750A0A140TA64 210 aa4.34□□□□□ -1.72
UBE3A-220ENST00000630424 SYNE2Q8WXH0 6885 aaKnown RBP4.32□□□□□ -1.72
UBE3A-220ENST00000630424 LCE2AQ5TA79 106 aaPredicted RBP4.32□□□□□ -1.72
UBE3A-220ENST00000630424 FAT4Q6V0I7 4981 aa4.31□□□□□ -1.72
UBE3A-220ENST00000630424 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
UBE3A-220ENST00000630424 KRTAP20-1Q3LI63 56 aa4.21□□□□□ -1.74
UBE3A-220ENST00000630424 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
UBE3A-220ENST00000630424 PRM1P04553 51 aa4.17□□□□□ -1.74
UBE3A-220ENST00000630424 MT1AP04731 61 aa4.13□□□□□ -1.75
UBE3A-220ENST00000630424 MACF1Q9UPN3 7388 aaKnown RBP4.12□□□□□ -1.75
UBE3A-220ENST00000630424 LCE5AQ5TCM9 118 aa4.11□□□□□ -1.75
UBE3A-220ENST00000630424 DSTQ03001 7570 aaKnown RBP4.06□□□□□ -1.76
UBE3A-220ENST00000630424 KRTAP6-3Q3LI67 103 aa4.04□□□□□ -1.76
UBE3A-220ENST00000630424 KRTAP4-9Q9BYQ8 210 aa4.04□□□□□ -1.76
UBE3A-220ENST00000630424 KRTAP2-3P0C7H8 128 aa4.02□□□□□ -1.77
UBE3A-220ENST00000630424 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
UBE3A-220ENST00000630424 KRTAP2-1Q9BYU5 128 aa4.02□□□□□ -1.77
UBE3A-220ENST00000630424 LCE1AQ5T7P2 110 aa4.02□□□□□ -1.77
UBE3A-220ENST00000630424 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.99□□□□□ -1.77
UBE3A-220ENST00000630424 FCGBPQ9Y6R7 5405 aaPredicted RBP3.93□□□□□ -1.78
UBE3A-220ENST00000630424 USH2AO75445 5202 aa3.92□□□□□ -1.78
UBE3A-220ENST00000630424 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.79
UBE3A-220ENST00000630424 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
UBE3A-220ENST00000630424 KRTAP6-1Q3LI64 71 aa3.86□□□□□ -1.79
UBE3A-220ENST00000630424 KMT2DO14686 5537 aa3.86□□□□□ -1.79
UBE3A-220ENST00000630424 LCE4AQ5TA78 99 aa3.85□□□□□ -1.79
UBE3A-220ENST00000630424 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
UBE3A-220ENST00000630424 LCE1CQ5T751 118 aa3.77□□□□□ -1.81
UBE3A-220ENST00000630424 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
UBE3A-220ENST00000630424 LCE1FQ5T754 118 aa3.77□□□□□ -1.81
UBE3A-220ENST00000630424 GPR98Q8WXG9 6306 aa3.75□□□□□ -1.81
UBE3A-220ENST00000630424 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
UBE3A-220ENST00000630424 MUC19Q7Z5P9 8384 aa3.68□□□□□ -1.82
UBE3A-220ENST00000630424 MDN1Q9NU22 5596 aa3.67□□□□□ -1.82
UBE3A-220ENST00000630424 SSPOA2VEC9 5147 aa3.63□□□□□ -1.83
UBE3A-220ENST00000630424 NEBP20929 6669 aa3.58□□□□□ -1.84
UBE3A-220ENST00000630424 KRTAP9-9Q9BYP9 154 aa3.48□□□□□ -1.85
UBE3A-220ENST00000630424 MUC12Q9UKN1 5478 aa3.35□□□□□ -1.87
UBE3A-220ENST00000630424 KRTAP5-9P26371 169 aa3.32□□□□□ -1.88
UBE3A-220ENST00000630424 KRTAP4-6Q9BYQ5 205 aa3.31□□□□□ -1.88
UBE3A-220ENST00000630424 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
UBE3A-220ENST00000630424 KRTAP4-11Q9BYQ6 195 aa3.11□□□□□ -1.91
UBE3A-220ENST00000630424 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
UBE3A-220ENST00000630424 KRTAP4-2Q9BYR5 136 aa3.04□□□□□ -1.92
UBE3A-220ENST00000630424 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
UBE3A-220ENST00000630424 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
UBE3A-220ENST00000630424 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
UBE3A-220ENST00000630424 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
UBE3A-220ENST00000630424 AHNAK2Q8IVF2 5795 aa2.81□□□□□ -1.96
UBE3A-220ENST00000630424 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
UBE3A-220ENST00000630424 KRTAP5-3Q6L8H2 238 aa2.72□□□□□ -1.97
UBE3A-220ENST00000630424 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
UBE3A-220ENST00000630424 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
UBE3A-220ENST00000630424 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
UBE3A-220ENST00000630424 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
UBE3A-220ENST00000630424 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
UBE3A-220ENST00000630424 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
UBE3A-220ENST00000630424 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
UBE3A-220ENST00000630424 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.07
UBE3A-220ENST00000630424 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
UBE3A-220ENST00000630424 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
UBE3A-220ENST00000630424 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
UBE3A-220ENST00000630424 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
UBE3A-220ENST00000630424 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 67.7 ms