RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 FLGP20930 4061 aaPredicted RBP3.89□□□□□ -1.79
CHD2-205ENST00000625662 TNXBP22105 4242 aa3.88□□□□□ -1.79
CHD2-205ENST00000625662 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.8
CHD2-205ENST00000625662 KRTAP2-3P0C7H8 128 aa3.83□□□□□ -1.8
CHD2-205ENST00000625662 MT1MQ8N339 61 aa3.83□□□□□ -1.8
CHD2-205ENST00000625662 KRTAP2-4Q9BYR9 128 aa3.83□□□□□ -1.8
CHD2-205ENST00000625662 RNF213Q63HN8 5207 aa3.81□□□□□ -1.8
CHD2-205ENST00000625662 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.8□□□□□ -1.8
CHD2-205ENST00000625662 MT4P47944 62 aa3.78□□□□□ -1.8
CHD2-205ENST00000625662 FAT4Q6V0I7 4981 aa3.77□□□□□ -1.81
CHD2-205ENST00000625662 UBR4Q5T4S7 5183 aa3.77□□□□□ -1.81
CHD2-205ENST00000625662 LPAP08519 4548 aa3.77□□□□□ -1.81
CHD2-205ENST00000625662 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
CHD2-205ENST00000625662 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
CHD2-205ENST00000625662 HMCN2Q8NDA2 5059 aa3.68□□□□□ -1.82
CHD2-205ENST00000625662 KRTAP2-2Q9BYT5 123 aa3.68□□□□□ -1.82
CHD2-205ENST00000625662 KRTAP2-1Q9BYU5 128 aa3.68□□□□□ -1.82
CHD2-205ENST00000625662 LCE4AQ5TA78 99 aa3.65□□□□□ -1.82
CHD2-205ENST00000625662 MT1AP04731 61 aa3.59□□□□□ -1.83
CHD2-205ENST00000625662 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
CHD2-205ENST00000625662 KRTAP4-7Q9BYR0 210 aa3.58□□□□□ -1.84
CHD2-205ENST00000625662 SYNE2Q8WXH0 6885 aaKnown RBP3.56□□□□□ -1.84
CHD2-205ENST00000625662 PRM1P04553 51 aa3.54□□□□□ -1.84
CHD2-205ENST00000625662 SYNE1Q8NF91 8797 aaKnown RBP3.51□□□□□ -1.85
CHD2-205ENST00000625662 LCE1DQ5T752 114 aa3.45□□□□□ -1.86
CHD2-205ENST00000625662 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
CHD2-205ENST00000625662 LCE5AQ5TCM9 118 aa3.44□□□□□ -1.86
CHD2-205ENST00000625662 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
CHD2-205ENST00000625662 LOC100996750A0A140TA64 210 aa3.4□□□□□ -1.87
CHD2-205ENST00000625662 FSIP2Q5CZC0 6907 aa3.38□□□□□ -1.87
CHD2-205ENST00000625662 MUC2Q02817 5179 aa3.35□□□□□ -1.87
CHD2-205ENST00000625662 KRTAP5-9P26371 169 aa3.31□□□□□ -1.88
CHD2-205ENST00000625662 KRTAP4-9Q9BYQ8 210 aa3.3□□□□□ -1.88
CHD2-205ENST00000625662 KRTAP9-4Q9BYQ2 154 aa3.3□□□□□ -1.88
CHD2-205ENST00000625662 NEBP20929 6669 aa3.24□□□□□ -1.89
CHD2-205ENST00000625662 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.9
CHD2-205ENST00000625662 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
CHD2-205ENST00000625662 SSPOA2VEC9 5147 aa3.17□□□□□ -1.9
CHD2-205ENST00000625662 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
CHD2-205ENST00000625662 USH2AO75445 5202 aa3.11□□□□□ -1.91
CHD2-205ENST00000625662 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
CHD2-205ENST00000625662 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
CHD2-205ENST00000625662 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
CHD2-205ENST00000625662 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
CHD2-205ENST00000625662 MACF1Q9UPN3 7388 aaKnown RBP2.93□□□□□ -1.94
CHD2-205ENST00000625662 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
CHD2-205ENST00000625662 KRTAP20-2Q3LI61 65 aa2.93□□□□□ -1.94
CHD2-205ENST00000625662 FCGBPQ9Y6R7 5405 aaPredicted RBP2.91□□□□□ -1.94
CHD2-205ENST00000625662 GPR98Q8WXG9 6306 aa2.89□□□□□ -1.95
CHD2-205ENST00000625662 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
CHD2-205ENST00000625662 DSTQ03001 7570 aaKnown RBP2.87□□□□□ -1.95
CHD2-205ENST00000625662 KRTAP4-6Q9BYQ5 205 aa2.83□□□□□ -1.96
CHD2-205ENST00000625662 KMT2DO14686 5537 aa2.79□□□□□ -1.96
CHD2-205ENST00000625662 MDN1Q9NU22 5596 aa2.78□□□□□ -1.96
CHD2-205ENST00000625662 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
CHD2-205ENST00000625662 KRTAP5-3Q6L8H2 238 aa2.55□□□□□ -2
CHD2-205ENST00000625662 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2.01
CHD2-205ENST00000625662 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
CHD2-205ENST00000625662 MUC12Q9UKN1 5478 aa2.51□□□□□ -2.01
CHD2-205ENST00000625662 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
CHD2-205ENST00000625662 HMCN1Q96RW7 5635 aa2.42□□□□□ -2.02
CHD2-205ENST00000625662 KRTAP4-12Q9BQ66 201 aa2.36□□□□□ -2.03
CHD2-205ENST00000625662 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
CHD2-205ENST00000625662 MUC5ACP98088 5654 aa2.34□□□□□ -2.04
CHD2-205ENST00000625662 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
CHD2-205ENST00000625662 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
CHD2-205ENST00000625662 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
CHD2-205ENST00000625662 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
CHD2-205ENST00000625662 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
CHD2-205ENST00000625662 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
CHD2-205ENST00000625662 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
CHD2-205ENST00000625662 KRTAP5-10Q6L8G5 202 aa1.97□□□□□ -2.09
CHD2-205ENST00000625662 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
CHD2-205ENST00000625662 KRTAP5-1Q6L8H4 278 aa1.9□□□□□ -2.11
CHD2-205ENST00000625662 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.76□□□□□ -2.13
CHD2-205ENST00000625662 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
CHD2-205ENST00000625662 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
CHD2-205ENST00000625662 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms