RNA–Protein interactions for RNA: ENST00000624683.1

KDM4B-212, Transcript of lysine demethylase 4B, humanhuman

Gene KDM4B, Length 5,076 nt, Biotype TEC, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-212ENST00000624683 UBR4Q5T4S7 5183 aa4.67□□□□□ -1.66
KDM4B-212ENST00000624683 LCE2AQ5TA79 106 aaPredicted RBP4.67□□□□□ -1.66
KDM4B-212ENST00000624683 HMCN2Q8NDA2 5059 aa4.66□□□□□ -1.66
KDM4B-212ENST00000624683 MT1MQ8N339 61 aa4.61□□□□□ -1.67
KDM4B-212ENST00000624683 KRTAP19-7Q3SYF9 63 aa4.53□□□□□ -1.68
KDM4B-212ENST00000624683 FSIP2Q5CZC0 6907 aa4.53□□□□□ -1.68
KDM4B-212ENST00000624683 KRTAP9-2Q9BYQ4 174 aa4.49□□□□□ -1.69
KDM4B-212ENST00000624683 KRTAP4-3Q9BYR4 195 aa4.49□□□□□ -1.69
KDM4B-212ENST00000624683 LOC100996750A0A140TA64 210 aa4.49□□□□□ -1.69
KDM4B-212ENST00000624683 LCE2DQ5TA82 110 aaPredicted RBP4.49□□□□□ -1.69
KDM4B-212ENST00000624683 MUC2Q02817 5179 aa4.42□□□□□ -1.7
KDM4B-212ENST00000624683 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
KDM4B-212ENST00000624683 MT3P25713 68 aa4.38□□□□□ -1.71
KDM4B-212ENST00000624683 PRM1P04553 51 aa4.29□□□□□ -1.72
KDM4B-212ENST00000624683 MT4P47944 62 aa4.27□□□□□ -1.73
KDM4B-212ENST00000624683 KRTAP2-3P0C7H8 128 aa4.27□□□□□ -1.73
KDM4B-212ENST00000624683 KRTAP2-4Q9BYR9 128 aa4.27□□□□□ -1.73
KDM4B-212ENST00000624683 KRTAP2-1Q9BYU5 128 aa4.27□□□□□ -1.73
KDM4B-212ENST00000624683 MT1AP04731 61 aa4.26□□□□□ -1.73
KDM4B-212ENST00000624683 KRTAP9-6A0A140TA67 174 aa4.22□□□□□ -1.73
KDM4B-212ENST00000624683 KRTAP9-6A8MVA2 160 aa4.19□□□□□ -1.74
KDM4B-212ENST00000624683 KRTAP4-9Q9BYQ8 210 aa4.13□□□□□ -1.75
KDM4B-212ENST00000624683 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
KDM4B-212ENST00000624683 LCE5AQ5TCM9 118 aa4.11□□□□□ -1.75
KDM4B-212ENST00000624683 SYNE2Q8WXH0 6885 aaKnown RBP4.07□□□□□ -1.76
KDM4B-212ENST00000624683 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
KDM4B-212ENST00000624683 KRTAP6-1Q3LI64 71 aa4.04□□□□□ -1.76
KDM4B-212ENST00000624683 KRTAP6-3Q3LI67 103 aa4.04□□□□□ -1.76
KDM4B-212ENST00000624683 USH2AO75445 5202 aa4.04□□□□□ -1.76
KDM4B-212ENST00000624683 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.77
KDM4B-212ENST00000624683 LCE1BQ5T7P3 118 aa4.02□□□□□ -1.77
KDM4B-212ENST00000624683 KRTAP9-7A8MTY7 169 aa3.95□□□□□ -1.78
KDM4B-212ENST00000624683 KRTAP9-4Q9BYQ2 154 aa3.93□□□□□ -1.78
KDM4B-212ENST00000624683 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.93□□□□□ -1.78
KDM4B-212ENST00000624683 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
KDM4B-212ENST00000624683 FCGBPQ9Y6R7 5405 aaPredicted RBP3.91□□□□□ -1.78
KDM4B-212ENST00000624683 KRTAP20-1Q3LI63 56 aa3.88□□□□□ -1.79
KDM4B-212ENST00000624683 KMT2DO14686 5537 aa3.85□□□□□ -1.79
KDM4B-212ENST00000624683 LCE4AQ5TA78 99 aa3.81□□□□□ -1.8
KDM4B-212ENST00000624683 DSTQ03001 7570 aaKnown RBP3.8□□□□□ -1.8
KDM4B-212ENST00000624683 KRTAP2-2Q9BYT5 123 aa3.73□□□□□ -1.81
KDM4B-212ENST00000624683 MACF1Q9UPN3 7388 aaKnown RBP3.68□□□□□ -1.82
KDM4B-212ENST00000624683 SSPOA2VEC9 5147 aa3.66□□□□□ -1.82
KDM4B-212ENST00000624683 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
KDM4B-212ENST00000624683 MUC12Q9UKN1 5478 aa3.62□□□□□ -1.83
KDM4B-212ENST00000624683 NEBP20929 6669 aa3.43□□□□□ -1.86
KDM4B-212ENST00000624683 KRTAP4-6Q9BYQ5 205 aa3.37□□□□□ -1.87
KDM4B-212ENST00000624683 LCE1CQ5T751 118 aa3.36□□□□□ -1.87
KDM4B-212ENST00000624683 LCE1EQ5T753 118 aa3.36□□□□□ -1.87
KDM4B-212ENST00000624683 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
KDM4B-212ENST00000624683 MDN1Q9NU22 5596 aa3.34□□□□□ -1.87
KDM4B-212ENST00000624683 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
KDM4B-212ENST00000624683 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
KDM4B-212ENST00000624683 GPR98Q8WXG9 6306 aa3.16□□□□□ -1.9
KDM4B-212ENST00000624683 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
KDM4B-212ENST00000624683 KRTAP4-11Q9BYQ6 195 aa3.13□□□□□ -1.91
KDM4B-212ENST00000624683 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
KDM4B-212ENST00000624683 KRTAP5-4Q6L8H1 288 aa3.09□□□□□ -1.91
KDM4B-212ENST00000624683 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
KDM4B-212ENST00000624683 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
KDM4B-212ENST00000624683 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
KDM4B-212ENST00000624683 MUC5ACP98088 5654 aa2.81□□□□□ -1.96
KDM4B-212ENST00000624683 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
KDM4B-212ENST00000624683 HMCN1Q96RW7 5635 aa2.67□□□□□ -1.98
KDM4B-212ENST00000624683 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
KDM4B-212ENST00000624683 AHNAK2Q8IVF2 5795 aa2.56□□□□□ -2
KDM4B-212ENST00000624683 KRTAP5-10Q6L8G5 202 aa2.48□□□□□ -2.01
KDM4B-212ENST00000624683 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
KDM4B-212ENST00000624683 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
KDM4B-212ENST00000624683 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
KDM4B-212ENST00000624683 KRTAP5-11Q6L8G4 156 aa2.24□□□□□ -2.05
KDM4B-212ENST00000624683 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
KDM4B-212ENST00000624683 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
KDM4B-212ENST00000624683 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
KDM4B-212ENST00000624683 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
KDM4B-212ENST00000624683 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
KDM4B-212ENST00000624683 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
KDM4B-212ENST00000624683 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 5.9 ms