RNA–Protein interactions for RNA: ENST00000619259.4

SEM1-220, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 462 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-220ENST00000619259 KRTAP12-1P59990 96 aa1.96□□□□□ -2.1
SEM1-220ENST00000619259 ROMO1P60602 79 aa1.95□□□□□ -2.1
SEM1-220ENST00000619259 A0A0D9SG42 100 aa1.94□□□□□ -2.1
SEM1-220ENST00000619259 KRTAP25-1Q3LHN0 102 aa1.94□□□□□ -2.1
SEM1-220ENST00000619259 CRIPTQ9P021 101 aa1.94□□□□□ -2.1
SEM1-220ENST00000619259 LINC01554Q52M75 96 aa1.91□□□□□ -2.1
SEM1-220ENST00000619259 MUC2Q02817 5179 aa1.88□□□□□ -2.11
SEM1-220ENST00000619259 MT1HP80294 61 aa1.87□□□□□ -2.11
SEM1-220ENST00000619259 SPRR2GQ9BYE4 73 aa1.87□□□□□ -2.11
SEM1-220ENST00000619259 C10orf95Q9H7T3 257 aa1.85□□□□□ -2.11
SEM1-220ENST00000619259 FAT4Q6V0I7 4981 aa1.85□□□□□ -2.11
SEM1-220ENST00000619259 KRTAP12-3P60328 96 aa1.84□□□□□ -2.11
SEM1-220ENST00000619259 UBR4Q5T4S7 5183 aa1.83□□□□□ -2.12
SEM1-220ENST00000619259 RNF213Q63HN8 5207 aa1.82□□□□□ -2.12
SEM1-220ENST00000619259 MT2AP02795 61 aa1.82□□□□□ -2.12
SEM1-220ENST00000619259 MT1FP04733 61 aa1.81□□□□□ -2.12
SEM1-220ENST00000619259 KRTAP19-8Q3LI54 63 aa1.81□□□□□ -2.12
SEM1-220ENST00000619259 M0R2T5 61 aa1.79□□□□□ -2.12
SEM1-220ENST00000619259 KRTAP6-3Q3LI67 103 aa1.78□□□□□ -2.12
SEM1-220ENST00000619259 PLAC4Q8WY50 150 aa1.77□□□□□ -2.13
SEM1-220ENST00000619259 TNP1P09430 55 aa1.76□□□□□ -2.13
SEM1-220ENST00000619259 MT1BP07438 61 aa1.75□□□□□ -2.13
SEM1-220ENST00000619259 KRTAP12-4P60329 112 aa1.73□□□□□ -2.13
SEM1-220ENST00000619259 KRTAP5-2Q701N4 177 aa1.73□□□□□ -2.13
SEM1-220ENST00000619259 MT1XP80297 61 aa1.72□□□□□ -2.13
SEM1-220ENST00000619259 KRTAP8-1Q8IUC2 63 aa1.69□□□□□ -2.14
SEM1-220ENST00000619259 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
SEM1-220ENST00000619259 PRO2289Q9P1D8 64 aa1.67□□□□□ -2.14
SEM1-220ENST00000619259 KRTAP19-6Q3LI70 58 aa1.58□□□□□ -2.16
SEM1-220ENST00000619259 USH2AO75445 5202 aa1.57□□□□□ -2.16
SEM1-220ENST00000619259 KRTAP19-5Q3LI72 72 aa1.55□□□□□ -2.16
SEM1-220ENST00000619259 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
SEM1-220ENST00000619259 KRTAP19-7Q3SYF9 63 aa1.54□□□□□ -2.16
SEM1-220ENST00000619259 SSPOA2VEC9 5147 aa1.52□□□□□ -2.17
SEM1-220ENST00000619259 MT1EP04732 61 aa1.5□□□□□ -2.17
SEM1-220ENST00000619259 MT1LQ93083 61 aa1.49□□□□□ -2.17
SEM1-220ENST00000619259 KMT2DO14686 5537 aa1.44□□□□□ -2.18
SEM1-220ENST00000619259 MT1GP13640 62 aa1.43□□□□□ -2.18
SEM1-220ENST00000619259 FCGBPQ9Y6R7 5405 aaPredicted RBP1.42□□□□□ -2.18
SEM1-220ENST00000619259 KRTAP19-3Q7Z4W3 81 aa1.42□□□□□ -2.18
SEM1-220ENST00000619259 KRTAP5-8O75690 187 aa1.41□□□□□ -2.18
SEM1-220ENST00000619259 KRTAP2-3P0C7H8 128 aa1.41□□□□□ -2.18
SEM1-220ENST00000619259 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
SEM1-220ENST00000619259 KRTAP2-4Q9BYR9 128 aa1.41□□□□□ -2.18
SEM1-220ENST00000619259 KRTAP2-1Q9BYU5 128 aa1.41□□□□□ -2.18
SEM1-220ENST00000619259 MT1MQ8N339 61 aa1.4□□□□□ -2.19
SEM1-220ENST00000619259 CRCT1Q9UGL9 99 aa1.39□□□□□ -2.19
SEM1-220ENST00000619259 INE1O15225 51 aa1.38□□□□□ -2.19
SEM1-220ENST00000619259 SPRR2FQ96RM1 72 aa1.36□□□□□ -2.19
SEM1-220ENST00000619259 FSIP2Q5CZC0 6907 aa1.35□□□□□ -2.19
SEM1-220ENST00000619259 MUC12Q9UKN1 5478 aa1.32□□□□□ -2.2
SEM1-220ENST00000619259 MACF1Q9UPN3 7388 aaKnown RBP1.3□□□□□ -2.2
SEM1-220ENST00000619259 MT1AP04731 61 aa1.27□□□□□ -2.21
SEM1-220ENST00000619259 SPRR2EP22531 72 aa1.26□□□□□ -2.21
SEM1-220ENST00000619259 SPRR2BP35325 72 aa1.26□□□□□ -2.21
SEM1-220ENST00000619259 SPRR2AP35326 72 aa1.26□□□□□ -2.21
SEM1-220ENST00000619259 KRTAP6-1Q3LI64 71 aa1.23□□□□□ -2.21
SEM1-220ENST00000619259 MDN1Q9NU22 5596 aa1.23□□□□□ -2.21
SEM1-220ENST00000619259 SYNE2Q8WXH0 6885 aaKnown RBP1.21□□□□□ -2.22
SEM1-220ENST00000619259 SPRR2DP22532 72 aa1.21□□□□□ -2.22
SEM1-220ENST00000619259 SYNE1Q8NF91 8797 aaKnown RBP1.21□□□□□ -2.22
SEM1-220ENST00000619259 DSTQ03001 7570 aaKnown RBP1.18□□□□□ -2.22
SEM1-220ENST00000619259 NEBP20929 6669 aa1.16□□□□□ -2.22
SEM1-220ENST00000619259 KRTAP20-1Q3LI63 56 aa1.11□□□□□ -2.23
SEM1-220ENST00000619259 KRTAP6-2Q3LI66 62 aa1.11□□□□□ -2.23
SEM1-220ENST00000619259 KRTAP20-2Q3LI61 65 aa1.08□□□□□ -2.24
SEM1-220ENST00000619259 MT4P47944 62 aa1.02□□□□□ -2.25
SEM1-220ENST00000619259 HMCN1Q96RW7 5635 aa1□□□□□ -2.25
SEM1-220ENST00000619259 PRM1P04553 51 aa1□□□□□ -2.25
SEM1-220ENST00000619259 KRTAP5-10Q6L8G5 202 aa0.95□□□□□ -2.26
SEM1-220ENST00000619259 MUC5ACP98088 5654 aa0.89□□□□□ -2.27
SEM1-220ENST00000619259 AHNAK2Q8IVF2 5795 aa0.85□□□□□ -2.27
SEM1-220ENST00000619259 GPR98Q8WXG9 6306 aa0.84□□□□□ -2.27
SEM1-220ENST00000619259 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
SEM1-220ENST00000619259 MUC5BQ9HC84 5762 aaPredicted RBP0.74□□□□□ -2.29
SEM1-220ENST00000619259 PHGR1C9JFL3 82 aa0.69□□□□□ -2.3
SEM1-220ENST00000619259 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
SEM1-220ENST00000619259 AHNAKQ09666 5890 aaKnown RBP0.67□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 10.8 ms