RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 HERC1Q15751 4861 aa4.07□□□□□ -1.76
PTPN9-206ENST00000618819 KRTAP2-3P0C7H8 128 aa4.06□□□□□ -1.76
PTPN9-206ENST00000618819 KRTAP2-4Q9BYR9 128 aa4.06□□□□□ -1.76
PTPN9-206ENST00000618819 KRTAP2-1Q9BYU5 128 aa4.06□□□□□ -1.76
PTPN9-206ENST00000618819 KRTAP6-2Q3LI66 62 aa4.05□□□□□ -1.76
PTPN9-206ENST00000618819 MT1AP04731 61 aa4.01□□□□□ -1.77
PTPN9-206ENST00000618819 MUC17Q685J3 4493 aa3.99□□□□□ -1.77
PTPN9-206ENST00000618819 HERC2O95714 4834 aa3.94□□□□□ -1.78
PTPN9-206ENST00000618819 LCE1CQ5T751 118 aa3.94□□□□□ -1.78
PTPN9-206ENST00000618819 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
PTPN9-206ENST00000618819 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
PTPN9-206ENST00000618819 LCE1AQ5T7P2 110 aa3.94□□□□□ -1.78
PTPN9-206ENST00000618819 KRTAP9-7A8MTY7 169 aa3.92□□□□□ -1.78
PTPN9-206ENST00000618819 KRTAP19-6Q3LI70 58 aa3.89□□□□□ -1.79
PTPN9-206ENST00000618819 SYNE2Q8WXH0 6885 aaKnown RBP3.89□□□□□ -1.79
PTPN9-206ENST00000618819 KRTAP19-7Q3SYF9 63 aa3.86□□□□□ -1.79
PTPN9-206ENST00000618819 LCE4AQ5TA78 99 aa3.84□□□□□ -1.79
PTPN9-206ENST00000618819 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
PTPN9-206ENST00000618819 SYNE1Q8NF91 8797 aaKnown RBP3.81□□□□□ -1.8
PTPN9-206ENST00000618819 KRTAP9-2Q9BYQ4 174 aa3.8□□□□□ -1.8
PTPN9-206ENST00000618819 PCLOQ9Y6V0 5065 aa3.74□□□□□ -1.81
PTPN9-206ENST00000618819 BIRC6Q9NR09 4857 aa3.73□□□□□ -1.81
PTPN9-206ENST00000618819 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
PTPN9-206ENST00000618819 KRTAP9-4Q9BYQ2 154 aa3.71□□□□□ -1.81
PTPN9-206ENST00000618819 EPPK1P58107 5090 aaKnown RBP3.7□□□□□ -1.82
PTPN9-206ENST00000618819 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
PTPN9-206ENST00000618819 ABCA13Q86UQ4 5058 aa3.66□□□□□ -1.82
PTPN9-206ENST00000618819 KRTAP20-1Q3LI63 56 aa3.62□□□□□ -1.83
PTPN9-206ENST00000618819 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
PTPN9-206ENST00000618819 FSIP2Q5CZC0 6907 aa3.57□□□□□ -1.84
PTPN9-206ENST00000618819 HMCN2Q8NDA2 5059 aa3.56□□□□□ -1.84
PTPN9-206ENST00000618819 KRTAP9-6A0A140TA67 174 aa3.53□□□□□ -1.84
PTPN9-206ENST00000618819 KRTAP4-11Q9BYQ6 195 aa3.53□□□□□ -1.84
PTPN9-206ENST00000618819 MUC2Q02817 5179 aa3.5□□□□□ -1.85
PTPN9-206ENST00000618819 LCE2AQ5TA79 106 aaPredicted RBP3.47□□□□□ -1.85
PTPN9-206ENST00000618819 FAT4Q6V0I7 4981 aa3.42□□□□□ -1.86
PTPN9-206ENST00000618819 RNF213Q63HN8 5207 aa3.39□□□□□ -1.87
PTPN9-206ENST00000618819 UBR4Q5T4S7 5183 aa3.36□□□□□ -1.87
PTPN9-206ENST00000618819 KRTAP6-3Q3LI67 103 aa3.27□□□□□ -1.89
PTPN9-206ENST00000618819 KRTAP20-2Q3LI61 65 aa3.27□□□□□ -1.89
PTPN9-206ENST00000618819 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
PTPN9-206ENST00000618819 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.2□□□□□ -1.9
PTPN9-206ENST00000618819 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
PTPN9-206ENST00000618819 FCGBPQ9Y6R7 5405 aaPredicted RBP3.08□□□□□ -1.92
PTPN9-206ENST00000618819 DSTQ03001 7570 aaKnown RBP3.05□□□□□ -1.92
PTPN9-206ENST00000618819 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
PTPN9-206ENST00000618819 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
PTPN9-206ENST00000618819 KRTAP4-6Q9BYQ5 205 aa3.02□□□□□ -1.93
PTPN9-206ENST00000618819 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
PTPN9-206ENST00000618819 KMT2DO14686 5537 aa3□□□□□ -1.93
PTPN9-206ENST00000618819 USH2AO75445 5202 aa2.98□□□□□ -1.93
PTPN9-206ENST00000618819 MACF1Q9UPN3 7388 aaKnown RBP2.89□□□□□ -1.95
PTPN9-206ENST00000618819 SSPOA2VEC9 5147 aa2.84□□□□□ -1.96
PTPN9-206ENST00000618819 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
PTPN9-206ENST00000618819 KRTAP5-9P26371 169 aa2.78□□□□□ -1.96
PTPN9-206ENST00000618819 NEBP20929 6669 aa2.69□□□□□ -1.98
PTPN9-206ENST00000618819 MUC12Q9UKN1 5478 aa2.6□□□□□ -1.99
PTPN9-206ENST00000618819 KRTAP5-4Q6L8H1 288 aa2.48□□□□□ -2.01
PTPN9-206ENST00000618819 MDN1Q9NU22 5596 aa2.42□□□□□ -2.02
PTPN9-206ENST00000618819 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
PTPN9-206ENST00000618819 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.05
PTPN9-206ENST00000618819 GPR98Q8WXG9 6306 aa2.19□□□□□ -2.06
PTPN9-206ENST00000618819 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
PTPN9-206ENST00000618819 KRTAP5-3Q6L8H2 238 aa2.14□□□□□ -2.07
PTPN9-206ENST00000618819 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
PTPN9-206ENST00000618819 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
PTPN9-206ENST00000618819 HMCN1Q96RW7 5635 aa2.02□□□□□ -2.09
PTPN9-206ENST00000618819 KRTAP5-1Q6L8H4 278 aa1.91□□□□□ -2.1
PTPN9-206ENST00000618819 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
PTPN9-206ENST00000618819 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
PTPN9-206ENST00000618819 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.78□□□□□ -2.12
PTPN9-206ENST00000618819 KRTAP5-11Q6L8G4 156 aa1.74□□□□□ -2.13
PTPN9-206ENST00000618819 AHNAK2Q8IVF2 5795 aa1.73□□□□□ -2.13
PTPN9-206ENST00000618819 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
PTPN9-206ENST00000618819 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
PTPN9-206ENST00000618819 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
PTPN9-206ENST00000618819 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 129.9 ms