RNA–Protein interactions for RNA: ENST00000618626.1

SLC46A1-208, Transcript of solute carrier family 46 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC46A1, Length 5,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-208ENST00000618626 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
SLC46A1-208ENST00000618626 HMCN2Q8NDA2 5059 aa4.33□□□□□ -1.72
SLC46A1-208ENST00000618626 MT1MQ8N339 61 aa4.33□□□□□ -1.72
SLC46A1-208ENST00000618626 LCE2AQ5TA79 106 aaPredicted RBP4.32□□□□□ -1.72
SLC46A1-208ENST00000618626 SYNE1Q8NF91 8797 aaKnown RBP4.28□□□□□ -1.72
SLC46A1-208ENST00000618626 KRTAP9-2Q9BYQ4 174 aa4.28□□□□□ -1.72
SLC46A1-208ENST00000618626 LCE2DQ5TA82 110 aaPredicted RBP4.27□□□□□ -1.73
SLC46A1-208ENST00000618626 KRTAP19-7Q3SYF9 63 aa4.21□□□□□ -1.74
SLC46A1-208ENST00000618626 MT3P25713 68 aa4.15□□□□□ -1.74
SLC46A1-208ENST00000618626 LOC100996750A0A140TA64 210 aa4.14□□□□□ -1.75
SLC46A1-208ENST00000618626 MUC2Q02817 5179 aa4.14□□□□□ -1.75
SLC46A1-208ENST00000618626 KRTAP9-6A0A140TA67 174 aa4.14□□□□□ -1.75
SLC46A1-208ENST00000618626 KRTAP4-3Q9BYR4 195 aa4.13□□□□□ -1.75
SLC46A1-208ENST00000618626 MT1AP04731 61 aa4.03□□□□□ -1.76
SLC46A1-208ENST00000618626 KRTAP2-3P0C7H8 128 aa4.03□□□□□ -1.76
SLC46A1-208ENST00000618626 KRTAP2-4Q9BYR9 128 aa4.03□□□□□ -1.76
SLC46A1-208ENST00000618626 KRTAP2-1Q9BYU5 128 aa4.03□□□□□ -1.76
SLC46A1-208ENST00000618626 MT4P47944 62 aa3.98□□□□□ -1.77
SLC46A1-208ENST00000618626 PRM1P04553 51 aa3.96□□□□□ -1.78
SLC46A1-208ENST00000618626 KRTAP20-1Q3LI63 56 aa3.9□□□□□ -1.78
SLC46A1-208ENST00000618626 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.79
SLC46A1-208ENST00000618626 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
SLC46A1-208ENST00000618626 KRTAP6-3Q3LI67 103 aa3.87□□□□□ -1.79
SLC46A1-208ENST00000618626 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
SLC46A1-208ENST00000618626 LCE5AQ5TCM9 118 aa3.83□□□□□ -1.8
SLC46A1-208ENST00000618626 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
SLC46A1-208ENST00000618626 KRTAP4-9Q9BYQ8 210 aa3.8□□□□□ -1.8
SLC46A1-208ENST00000618626 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
SLC46A1-208ENST00000618626 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
SLC46A1-208ENST00000618626 SYNE2Q8WXH0 6885 aaKnown RBP3.76□□□□□ -1.81
SLC46A1-208ENST00000618626 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
SLC46A1-208ENST00000618626 USH2AO75445 5202 aa3.76□□□□□ -1.81
SLC46A1-208ENST00000618626 FCGBPQ9Y6R7 5405 aaPredicted RBP3.73□□□□□ -1.81
SLC46A1-208ENST00000618626 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.73□□□□□ -1.81
SLC46A1-208ENST00000618626 KRTAP9-4Q9BYQ2 154 aa3.71□□□□□ -1.81
SLC46A1-208ENST00000618626 LCE4AQ5TA78 99 aa3.71□□□□□ -1.82
SLC46A1-208ENST00000618626 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
SLC46A1-208ENST00000618626 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
SLC46A1-208ENST00000618626 KRTAP2-2Q9BYT5 123 aa3.61□□□□□ -1.83
SLC46A1-208ENST00000618626 KMT2DO14686 5537 aa3.59□□□□□ -1.84
SLC46A1-208ENST00000618626 SSPOA2VEC9 5147 aa3.5□□□□□ -1.85
SLC46A1-208ENST00000618626 MACF1Q9UPN3 7388 aaKnown RBP3.46□□□□□ -1.86
SLC46A1-208ENST00000618626 MUC12Q9UKN1 5478 aa3.39□□□□□ -1.87
SLC46A1-208ENST00000618626 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
SLC46A1-208ENST00000618626 MDN1Q9NU22 5596 aa3.27□□□□□ -1.89
SLC46A1-208ENST00000618626 NEBP20929 6669 aa3.25□□□□□ -1.89
SLC46A1-208ENST00000618626 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
SLC46A1-208ENST00000618626 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
SLC46A1-208ENST00000618626 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
SLC46A1-208ENST00000618626 KRTAP9-9Q9BYP9 154 aa3.15□□□□□ -1.9
SLC46A1-208ENST00000618626 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
SLC46A1-208ENST00000618626 KRTAP4-6Q9BYQ5 205 aa3.09□□□□□ -1.92
SLC46A1-208ENST00000618626 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
SLC46A1-208ENST00000618626 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
SLC46A1-208ENST00000618626 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
SLC46A1-208ENST00000618626 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
SLC46A1-208ENST00000618626 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.95
SLC46A1-208ENST00000618626 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
SLC46A1-208ENST00000618626 MUC5ACP98088 5654 aa2.61□□□□□ -1.99
SLC46A1-208ENST00000618626 KRTAP4-12Q9BQ66 201 aa2.6□□□□□ -1.99
SLC46A1-208ENST00000618626 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
SLC46A1-208ENST00000618626 KRTAP5-3Q6L8H2 238 aa2.55□□□□□ -2
SLC46A1-208ENST00000618626 HMCN1Q96RW7 5635 aa2.53□□□□□ -2.01
SLC46A1-208ENST00000618626 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
SLC46A1-208ENST00000618626 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
SLC46A1-208ENST00000618626 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
SLC46A1-208ENST00000618626 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
SLC46A1-208ENST00000618626 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
SLC46A1-208ENST00000618626 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.07
SLC46A1-208ENST00000618626 AHNAKQ09666 5890 aaKnown RBP2.09□□□□□ -2.08
SLC46A1-208ENST00000618626 KRTAP5-1Q6L8H4 278 aa2.07□□□□□ -2.08
SLC46A1-208ENST00000618626 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
SLC46A1-208ENST00000618626 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
SLC46A1-208ENST00000618626 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
SLC46A1-208ENST00000618626 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
SLC46A1-208ENST00000618626 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
SLC46A1-208ENST00000618626 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 631.8 ms